RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 FBXL13Q8NEE6 735 aa12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 OLIG1Q8TAK6 271 aa12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 WHAMMQ8TF30 809 aa12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 ELMO3Q96BJ8 720 aa12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 HEXIM2Q96MH2 286 aaKnown RBP12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 XPO6Q96QU8 1125 aaKnown RBP12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 GOLPH3LQ9H4A5 285 aa12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 FAM49BQ9NUQ9 324 aa12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 POLR3BQ9NW08 1133 aaPredicted RBP12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 RAB20Q9NX57 234 aa12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 CLIC5Q9NZA1 410 aa12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 MARK1Q9P0L2 795 aa12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 HMGXB4Q9UGU5 601 aa12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 USP3Q9Y6I4 520 aa12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 MYH10P35580 1976 aa12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 CNOT1A5YKK6 2376 aaKnown RBP12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 BCLAF3A2AJT9 711 aaKnown RBP12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 TM4SF5O14894 197 aa12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 SLC16A3O15427 465 aaKnown RBP12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 ZBTB24O43167 697 aaPredicted RBP12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 GDF9O60383 454 aa12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 TULP3O75386 442 aa12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 KLF8O95600 359 aaPredicted RBP12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 CAVIN2O95810 425 aa12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 RALAP11233 206 aa12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 RARGP13631 454 aa12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 SLC8A3P57103 927 aa12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 NUCB2P80303 420 aa12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 FKBP3Q00688 224 aaKnown RBP12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 ORC1Q13415 861 aa12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 BECN1Q14457 450 aa12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 E2F5Q15329 346 aa12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 ZNF658Q5TYW1 1059 aaPredicted RBP12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 PMS2CLQ68D20 193 aa12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 ANO7Q6IWH7 933 aa12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 TMEM25Q86YD3 366 aa12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 ELOA2Q8IYF1 753 aaPredicted RBP12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 FMR1NBQ8N0W7 255 aaPredicted RBP12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 PHTF2Q8N3S3 785 aa12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 CCDC33Q8N5R6 958 aa12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 ALLCQ8N6M5 410 aa12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 TXNDC5Q8NBS9 432 aaKnown RBP12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 TIGD1Q96MW7 591 aa12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 TWNKQ96RR1 684 aa12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 TSG101Q99816 390 aa12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.84□□□□□ -0.354e-7■■■■■ 26.8
GTF3C1-204ENST00000564664 MYOFQ9NZM1 2061 aa12.84□□□□□ -0.35
GTF3C1-204ENST00000564664 TPRP12270 2363 aaKnown RBP12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 GREM1O60565 184 aa12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 TBX18O95935 607 aa12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 ADRB1P08588 477 aa12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 CHRM1P11229 460 aaPredicted RBP12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 CD58P19256 250 aa12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 GBP1P32455 592 aa12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 TIE1P35590 1138 aa12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 MXI1P50539 228 aa12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 COG7P83436 770 aa12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 CREB5Q02930 508 aa12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 SF3A2Q15428 464 aaKnown RBP12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 ANO4Q32M45 955 aa12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 PPM1JQ5JR12 505 aa12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 PPP1R26Q5T8A7 1209 aaPredicted RBP12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 STPG1Q5TH74 334 aa12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 ARHGAP17Q68EM7 881 aa12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 SDE2Q6IQ49 451 aa12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 TMEM92Q6UXU6 159 aa12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 C12orf40Q86WS4 652 aa12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 SPATA20Q8TB22 786 aa12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 TMEM176AQ96HP8 235 aa12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 CHAMP1Q96JM3 812 aa12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 SPACA7Q96KW9 195 aa12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 DCLK3Q9C098 648 aa12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 CISHQ9NSE2 258 aa12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 KIAA1257Q9ULG3 409 aa12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 COQ4Q9Y3A0 265 aa12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 MYO18AQ92614 2054 aaKnown RBP12.83□□□□□ -0.36
GTF3C1-204ENST00000564664 MYO16Q9Y6X6 1858 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 ABCA7Q8IZY2 2146 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 EML5Q05BV3 1969 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 A0A1W2PQH9 124 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 SGK1O00141 431 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 SCAMP3O14828 347 aaKnown RBP12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 KHNYNO15037 678 aaKnown RBP12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 DCLK1O15075 740 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 NPC1O15118 1278 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 CYP26A1O43174 497 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 CACNG3O60359 315 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 ADAM23O75077 832 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 NTSR1P30989 418 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 CHKAP35790 457 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 P2RY2P41231 377 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 PPP1R2P41236 205 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 PRCPP42785 496 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 PGFP49763 221 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 YWHAEP62258 255 aaKnown RBP12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 LRRC63Q05C16 580 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 C10orf120Q5SQS8 335 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 EMC10Q5UCC4 262 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 GRAMD4Q6IC98 578 aa12.82□□□□□ -0.36
GTF3C1-204ENST00000564664 LPCAT2Q7L5N7 544 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms