RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 HHLA1C9JL84 531 aa17.76■□□□□ 0.43
HDGFL3-203ENST00000563404 MAP3K13O43283 966 aa17.76■□□□□ 0.43
HDGFL3-203ENST00000563404 SLFN14P0C7P3 912 aa17.76■□□□□ 0.43
HDGFL3-203ENST00000563404 C1QTNF9P0C862 333 aa17.76■□□□□ 0.43
HDGFL3-203ENST00000563404 GABRG2P18507 467 aa17.76■□□□□ 0.43
HDGFL3-203ENST00000563404 SPINK2P20155 84 aa17.76■□□□□ 0.43
HDGFL3-203ENST00000563404 CSRP1P21291 193 aaKnown RBP17.76■□□□□ 0.43
HDGFL3-203ENST00000563404 WASP42768 502 aa17.76■□□□□ 0.43
HDGFL3-203ENST00000563404 SGSM1Q2NKQ1 1148 aa17.76■□□□□ 0.43
HDGFL3-203ENST00000563404 UAP1L1Q3KQV9 507 aa17.76■□□□□ 0.43
HDGFL3-203ENST00000563404 C10orf76Q5T2E6 689 aa17.76■□□□□ 0.43
HDGFL3-203ENST00000563404 BTBD8Q5XKL5 378 aa17.76■□□□□ 0.43
HDGFL3-203ENST00000563404 HTR3DQ70Z44 454 aa17.76■□□□□ 0.43
HDGFL3-203ENST00000563404 SV2AQ7L0J3 742 aa17.76■□□□□ 0.43
HDGFL3-203ENST00000563404 SYT12Q8IV01 421 aa17.76■□□□□ 0.43
HDGFL3-203ENST00000563404 PGBD3Q8N328 593 aa17.76■□□□□ 0.43
HDGFL3-203ENST00000563404 SNX21Q969T3 373 aa17.76■□□□□ 0.43
HDGFL3-203ENST00000563404 P2RY11Q96G91 374 aa17.76■□□□□ 0.43
HDGFL3-203ENST00000563404 ACOX2Q99424 681 aa17.76■□□□□ 0.43
HDGFL3-203ENST00000563404 FSCN3Q9NQT6 498 aa17.76■□□□□ 0.43
HDGFL3-203ENST00000563404 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.76■□□□□ 0.43
HDGFL3-203ENST00000563404 A0A1W2PQF6 199 aa17.75■□□□□ 0.43
HDGFL3-203ENST00000563404 ASS1P00966 412 aaKnown RBP17.75■□□□□ 0.43
HDGFL3-203ENST00000563404 NR3C1P04150 777 aa17.75■□□□□ 0.43
HDGFL3-203ENST00000563404 PROS1P07225 676 aa17.75■□□□□ 0.43
HDGFL3-203ENST00000563404 CEACAM1P13688 526 aa17.75■□□□□ 0.43
HDGFL3-203ENST00000563404 ITPKAP23677 461 aa17.75■□□□□ 0.43
HDGFL3-203ENST00000563404 DNM1Q05193 864 aaKnown RBP17.75■□□□□ 0.43
HDGFL3-203ENST00000563404 FOXC1Q12948 553 aa17.75■□□□□ 0.43
HDGFL3-203ENST00000563404 PEAR1Q5VY43 1037 aaPredicted RBP17.75■□□□□ 0.43
HDGFL3-203ENST00000563404 EGFLAMQ63HQ2 1017 aa17.75■□□□□ 0.43
HDGFL3-203ENST00000563404 CEP57L1Q8IYX8 460 aa17.75■□□□□ 0.43
HDGFL3-203ENST00000563404 DEFB119Q8N690 84 aa17.75■□□□□ 0.43
HDGFL3-203ENST00000563404 DEFB124Q8NES8 71 aa17.75■□□□□ 0.43
HDGFL3-203ENST00000563404 TMC2Q8TDI7 906 aa17.75■□□□□ 0.43
HDGFL3-203ENST00000563404 KCNV2Q8TDN2 545 aa17.75■□□□□ 0.43
HDGFL3-203ENST00000563404 NMUR1Q9HB89 426 aa17.75■□□□□ 0.43
HDGFL3-203ENST00000563404 TLR8Q9NR97 1041 aaKnown RBP17.75■□□□□ 0.43
HDGFL3-203ENST00000563404 EXOC1Q9NV70 894 aa17.75■□□□□ 0.43
HDGFL3-203ENST00000563404 PILRBQ9UKJ0 227 aa17.75■□□□□ 0.43
HDGFL3-203ENST00000563404 RCOR1Q9UKL0 485 aa17.75■□□□□ 0.43
HDGFL3-203ENST00000563404 STARD13Q9Y3M8 1113 aa17.75■□□□□ 0.43
HDGFL3-203ENST00000563404 ZZEF1O43149 2961 aa17.75■□□□□ 0.43
HDGFL3-203ENST00000563404 GON4LQ3T8J9 2241 aa17.75■□□□□ 0.43
HDGFL3-203ENST00000563404 ASCC3Q8N3C0 2202 aaKnown RBP17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 PDXKO00764 312 aa17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 MDM4O15151 490 aa17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 CYP26A1O43174 497 aa17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 HLA-DRAP01903 254 aa17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 RPN1P04843 607 aaKnown RBP17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 P4HA1P13674 534 aa17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 ENGP17813 658 aa17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 ADORA2BP29275 332 aa17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 MAPK8P45983 427 aa17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 SPDYCQ5MJ68 293 aa17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 LYSMD4Q5XG99 296 aa17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 SLC23A3Q6PIS1 610 aa17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 CLEC20AQ6ZU45 233 aa17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 TOGARAM2Q6ZUX3 1019 aa17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 TRMT11Q7Z4G4 463 aaKnown RBP17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 UNC93AQ86WB7 457 aa17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 TAF4BQ92750 862 aa17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 JAKMIP2Q96AA8 810 aa17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 ERLEC1Q96DZ1 483 aa17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 TMEM121BQ9BXQ6 578 aaPredicted RBP17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 NACA2Q9H009 215 aa17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 FBXO44Q9H4M3 255 aa17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 APOBEC3GQ9HC16 384 aaKnown RBP17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 CYLDQ9NQC7 956 aa17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 DNAJC17Q9NVM6 304 aaKnown RBP17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 CALCOCO1Q9P1Z2 691 aa17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 NUDT5Q9UKK9 219 aa17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 SCML2Q9UQR0 700 aa17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 AKAP13Q12802 2813 aa17.74■□□□□ 0.43
HDGFL3-203ENST00000563404 PRRT4C9JH25 899 aa17.73■□□□□ 0.43
HDGFL3-203ENST00000563404 NEDD8-MDP1E9PL57 170 aa17.73■□□□□ 0.43
HDGFL3-203ENST00000563404 CACNG3O60359 315 aa17.73■□□□□ 0.43
HDGFL3-203ENST00000563404 FAM200BP0CF97 657 aa17.73■□□□□ 0.43
HDGFL3-203ENST00000563404 HOXB2P14652 356 aa17.73■□□□□ 0.43
HDGFL3-203ENST00000563404 TYRP14679 529 aa17.73■□□□□ 0.43
HDGFL3-203ENST00000563404 NTSR1P30989 418 aa17.73■□□□□ 0.43
HDGFL3-203ENST00000563404 INCA1Q0VD86 236 aa17.73■□□□□ 0.43
HDGFL3-203ENST00000563404 LMAN2Q12907 356 aa17.73■□□□□ 0.43
HDGFL3-203ENST00000563404 BYSLQ13895 437 aaKnown RBP17.73■□□□□ 0.43
HDGFL3-203ENST00000563404 CEP135Q66GS9 1140 aa17.73■□□□□ 0.43
HDGFL3-203ENST00000563404 GRAMD4Q6IC98 578 aa17.73■□□□□ 0.43
HDGFL3-203ENST00000563404 KIAA1211LQ6NV74 962 aa17.73■□□□□ 0.43
HDGFL3-203ENST00000563404 TPGS1Q6ZTW0 290 aa17.73■□□□□ 0.43
HDGFL3-203ENST00000563404 HNRNPABQ99729 332 aaKnown RBP17.73■□□□□ 0.43
HDGFL3-203ENST00000563404 NUSAP1Q9BXS6 441 aaKnown RBP17.73■□□□□ 0.43
HDGFL3-203ENST00000563404 MARK1Q9P0L2 795 aa17.73■□□□□ 0.43
HDGFL3-203ENST00000563404 RALYQ9UKM9 306 aaKnown RBP17.73■□□□□ 0.43
HDGFL3-203ENST00000563404 SPEGQ15772 3267 aa17.72■□□□□ 0.43
HDGFL3-203ENST00000563404 IGHV1OR15-9A0A0B4J2B8 117 aa17.72■□□□□ 0.43
HDGFL3-203ENST00000563404 A0A1B0GVL5 298 aa17.72■□□□□ 0.43
HDGFL3-203ENST00000563404 A0A1W2PQH9 124 aa17.72■□□□□ 0.43
HDGFL3-203ENST00000563404 IKBKBO14920 756 aa17.72■□□□□ 0.43
HDGFL3-203ENST00000563404 CISD3P0C7P0 127 aa17.72■□□□□ 0.43
HDGFL3-203ENST00000563404 PFKFB1P16118 471 aa17.72■□□□□ 0.43
HDGFL3-203ENST00000563404 ATP5C1P36542 298 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms