RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 TJP2Q9UDY2 1190 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 WNT6Q9Y6F9 365 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 KMT2EQ8IZD2 1858 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 ZDBF2Q9HCK1 2354 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 MYO16Q9Y6X6 1858 aa8.98□□□□□ -0.97
UBR1-204ENST00000563239 TICRRQ7Z2Z1 1910 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 SCAMP3O14828 347 aaKnown RBP8.97□□□□□ -0.97
UBR1-204ENST00000563239 MED7O43513 233 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 CAVIN2O95810 425 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 FYNP06241 537 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 TPM2P07951 284 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 MBL2P11226 248 aaPredicted RBP8.97□□□□□ -0.97
UBR1-204ENST00000563239 GLULP15104 373 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 CYP11B1P15538 503 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 AOC1P19801 751 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 AVPR2P30518 371 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 PSEN1P49768 467 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 CLCN5P51795 746 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 YWHAGP61981 247 aaKnown RBP eCLIP8.97□□□□□ -0.97
UBR1-204ENST00000563239 PLCB2Q00722 1185 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 PTK2Q05397 1052 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 RUNX3Q13761 415 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 GAB4Q2WGN9 574 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 BSPRYQ5W0U4 402 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 ASTLQ6HA08 431 aaPredicted RBP8.97□□□□□ -0.97
UBR1-204ENST00000563239 KLHDC10Q6PID8 442 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 TXNDC11Q6PKC3 985 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 LRSAM1Q6UWE0 723 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 TPRG1Q6ZUI0 275 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 TMEM110Q86TL2 294 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 NOP9Q86U38 636 aaKnown RBP8.97□□□□□ -0.97
UBR1-204ENST00000563239 SCUBE3Q8IX30 993 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 KIAA1958Q8N8K9 716 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 LHX5Q9H2C1 402 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 NLRC4Q9NPP4 1024 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 CNGB3Q9NQW8 809 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 THG1LQ9NWX6 298 aaKnown RBP8.97□□□□□ -0.97
UBR1-204ENST00000563239 DUS2Q9NX74 493 aaKnown RBP8.97□□□□□ -0.97
UBR1-204ENST00000563239 NAGPAQ9UK23 515 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 NOCTQ9UK39 431 aaKnown RBP8.97□□□□□ -0.97
UBR1-204ENST00000563239 PIAS3Q9Y6X2 628 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 ZNF318Q5VUA4 2279 aa8.97□□□□□ -0.97
UBR1-204ENST00000563239 KANSL1LA0AUZ9 987 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 E2F8A0AVK6 867 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 E5RJQ4 531 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 SPECC1L-ADORA2AF8WAN1 911 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 PAPSS1O43252 624 aaPredicted RBP8.96□□□□□ -0.98
UBR1-204ENST00000563239 GFPT2O94808 682 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 KLKB1P03952 638 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 CHRNB2P17787 502 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 TARSP26639 723 aaKnown RBP8.96□□□□□ -0.98
UBR1-204ENST00000563239 CTHP32929 405 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 CDH5P33151 784 aaPredicted RBP8.96□□□□□ -0.98
UBR1-204ENST00000563239 SOX5P35711 763 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 ATP5C1P36542 298 aaKnown RBP8.96□□□□□ -0.98
UBR1-204ENST00000563239 PBX1P40424 430 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 BPIFB4P59827 614 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 FANCCQ00597 558 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 PDCLQ13371 301 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 PDGFRLQ15198 375 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 ITPRIPL2Q3MIP1 535 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 C10orf120Q5SQS8 335 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 NAIF1Q69YI7 327 aaPredicted RBP8.96□□□□□ -0.98
UBR1-204ENST00000563239 PASD1Q8IV76 773 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 CCDC105Q8IYK2 499 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 ADGRG2Q8IZP9 1017 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 SIX6OS1Q8N1H7 587 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 ARHGAP18Q8N392 663 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 C1orf131Q8NDD1 294 aaKnown RBP8.96□□□□□ -0.98
UBR1-204ENST00000563239 FLCNQ8NFG4 579 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 PJA1Q8NG27 643 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 NEK11Q8NG66 645 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 OLIG1Q8TAK6 271 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 CSGALNACT1Q8TDX6 532 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 EPS8L1Q8TE68 723 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 SLC20A1Q8WUM9 679 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 IRGQQ8WZA9 623 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 BAP1Q92560 729 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 EDEM1Q92611 657 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 P2RY11Q96G91 374 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 PIWIL1Q96J94 861 aaKnown RBP8.96□□□□□ -0.98
UBR1-204ENST00000563239 CPXM1Q96SM3 734 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 MIS12Q9H081 205 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 ECT2Q9H8V3 914 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 LTB4R2Q9NPC1 389 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 DNMT3LQ9UJW3 386 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 DAAM1Q9Y4D1 1078 aa8.96□□□□□ -0.98
UBR1-204ENST00000563239 A0A1W2PQC6 194 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 FAM170BA6NMN3 283 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 STC2O76061 302 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 FBXO21O94952 628 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 ERBB2P04626 1255 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 DCNP07585 359 aaKnown RBP8.95□□□□□ -0.98
UBR1-204ENST00000563239 MMEP08473 750 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 IRF1P10914 325 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 RALAP11233 206 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 GJA4P35212 333 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 KRT9P35527 623 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 ACADSBP45954 432 aa8.95□□□□□ -0.98
UBR1-204ENST00000563239 IFNAR2P48551 515 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms