RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 KRT13P13646 458 aa28.57■■■□□ 2.16
SNRPA1-215ENST00000561187 ACO1P21399 889 aaKnown RBP28.57■■■□□ 2.16
SNRPA1-215ENST00000561187 WASP42768 502 aa28.57■■■□□ 2.16
SNRPA1-215ENST00000561187 DPYDQ12882 1025 aa28.57■■■□□ 2.16
SNRPA1-215ENST00000561187 C10orf76Q5T2E6 689 aa28.57■■■□□ 2.16
SNRPA1-215ENST00000561187 SMYD4Q8IYR2 804 aaPredicted RBP28.57■■■□□ 2.16
SNRPA1-215ENST00000561187 PGBD3Q8N328 593 aa28.57■■■□□ 2.16
SNRPA1-215ENST00000561187 CSNK1G1Q9HCP0 422 aa28.57■■■□□ 2.16
SNRPA1-215ENST00000561187 IKBKBO14920 756 aa28.56■■■□□ 2.16
SNRPA1-215ENST00000561187 ZNF394Q53GI3 561 aa28.56■■■□□ 2.16
SNRPA1-215ENST00000561187 EOGTQ5NDL2 527 aa28.56■■■□□ 2.16
SNRPA1-215ENST00000561187 TPGS1Q6ZTW0 290 aa28.56■■■□□ 2.16
SNRPA1-215ENST00000561187 ETFBKMTQ8IXQ9 262 aa28.56■■■□□ 2.16
SNRPA1-215ENST00000561187 TMEM174Q8WUU8 243 aa28.56■■■□□ 2.16
SNRPA1-215ENST00000561187 DDX1Q92499 740 aaKnown RBP28.56■■■□□ 2.16
SNRPA1-215ENST00000561187 BHMTQ93088 406 aa28.56■■■□□ 2.16
SNRPA1-215ENST00000561187 OTUB2Q96DC9 234 aa28.56■■■□□ 2.16
SNRPA1-215ENST00000561187 CYFIP2Q96F07 1278 aa28.56■■■□□ 2.16
SNRPA1-215ENST00000561187 NT5C1AQ9BXI3 368 aa28.56■■■□□ 2.16
SNRPA1-215ENST00000561187 NIF3L1Q9GZT8 377 aa28.56■■■□□ 2.16
SNRPA1-215ENST00000561187 NMUR1Q9HB89 426 aa28.56■■■□□ 2.16
SNRPA1-215ENST00000561187 POLMQ9NP87 494 aaPredicted RBP28.56■■■□□ 2.16
SNRPA1-215ENST00000561187 COMMD8Q9NX08 183 aa28.56■■■□□ 2.16
SNRPA1-215ENST00000561187 DEC1Q9P2X7 70 aa28.56■■■□□ 2.16
SNRPA1-215ENST00000561187 A0A1W2PQH9 124 aa28.55■■■□□ 2.16
SNRPA1-215ENST00000561187 NEDD8-MDP1E9PL57 170 aa28.55■■■□□ 2.16
SNRPA1-215ENST00000561187 HOXC11O43248 304 aaPredicted RBP28.55■■■□□ 2.16
SNRPA1-215ENST00000561187 INCA1Q0VD86 236 aa28.55■■■□□ 2.16
SNRPA1-215ENST00000561187 N4BP2L1Q5TBK1 243 aaPredicted RBP28.55■■■□□ 2.16
SNRPA1-215ENST00000561187 KRBA2Q6ZNG9 492 aa28.55■■■□□ 2.16
SNRPA1-215ENST00000561187 INTS8Q75QN2 995 aaKnown RBP28.55■■■□□ 2.16
SNRPA1-215ENST00000561187 ZNF513Q8N8E2 541 aaPredicted RBP28.55■■■□□ 2.16
SNRPA1-215ENST00000561187 WHAMMQ8TF30 809 aa28.55■■■□□ 2.16
SNRPA1-215ENST00000561187 DNAJC17Q9NVM6 304 aaKnown RBP28.55■■■□□ 2.16
SNRPA1-215ENST00000561187 ATXN2Q99700 1313 aaKnown RBP28.54■■■□□ 2.16
SNRPA1-215ENST00000561187 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa28.54■■■□□ 2.16
SNRPA1-215ENST00000561187 LNP1A1A4G5 178 aa28.54■■■□□ 2.16
SNRPA1-215ENST00000561187 C4orf47A7E2U8 309 aa28.54■■■□□ 2.16
SNRPA1-215ENST00000561187 HHLA1C9JL84 531 aa28.54■■■□□ 2.16
SNRPA1-215ENST00000561187 TRIM21P19474 475 aaKnown RBP28.54■■■□□ 2.16
SNRPA1-215ENST00000561187 TMEFF1Q8IYR6 380 aa28.54■■■□□ 2.16
SNRPA1-215ENST00000561187 TERB1Q8NA31 727 aa28.54■■■□□ 2.16
SNRPA1-215ENST00000561187 PIGKQ92643 395 aa28.54■■■□□ 2.16
SNRPA1-215ENST00000561187 SPACA7Q96KW9 195 aa28.54■■■□□ 2.16
SNRPA1-215ENST00000561187 HNRNPABQ99729 332 aaKnown RBP28.54■■■□□ 2.16
SNRPA1-215ENST00000561187 KLF16Q9BXK1 252 aaPredicted RBP28.54■■■□□ 2.16
SNRPA1-215ENST00000561187 GON4LQ3T8J9 2241 aa28.54■■■□□ 2.16
SNRPA1-215ENST00000561187 TM4SF5O14894 197 aa28.53■■■□□ 2.16
SNRPA1-215ENST00000561187 TNFRSF4P43489 277 aa28.53■■■□□ 2.16
SNRPA1-215ENST00000561187 ADAM9Q13443 819 aa28.53■■■□□ 2.16
SNRPA1-215ENST00000561187 C11orf74Q86VG3 221 aa28.53■■■□□ 2.16
SNRPA1-215ENST00000561187 MIB1Q86YT6 1006 aa28.53■■■□□ 2.16
SNRPA1-215ENST00000561187 SCML2Q9UQR0 700 aa28.53■■■□□ 2.16
SNRPA1-215ENST00000561187 MAPK13O15264 365 aa28.52■■■□□ 2.16
SNRPA1-215ENST00000561187 MAP3K13O43283 966 aa28.52■■■□□ 2.16
SNRPA1-215ENST00000561187 CILPO75339 1184 aa28.52■■■□□ 2.16
SNRPA1-215ENST00000561187 RARGP13631 454 aa28.52■■■□□ 2.16
SNRPA1-215ENST00000561187 PSMC2P35998 433 aaKnown RBP28.52■■■□□ 2.16
SNRPA1-215ENST00000561187 ATP5C1P36542 298 aaKnown RBP28.52■■■□□ 2.16
SNRPA1-215ENST00000561187 C10orf120Q5SQS8 335 aa28.52■■■□□ 2.16
SNRPA1-215ENST00000561187 EGFLAMQ63HQ2 1017 aa28.52■■■□□ 2.16
SNRPA1-215ENST00000561187 GRAMD4Q6IC98 578 aa28.52■■■□□ 2.16
SNRPA1-215ENST00000561187 PSAPL1Q6NUJ1 521 aa28.52■■■□□ 2.16
SNRPA1-215ENST00000561187 CCDC150Q8NCX0 1101 aa28.52■■■□□ 2.16
SNRPA1-215ENST00000561187 OLIG1Q8TAK6 271 aa28.52■■■□□ 2.16
SNRPA1-215ENST00000561187 BBS2Q9BXC9 721 aa28.52■■■□□ 2.16
SNRPA1-215ENST00000561187 CYLDQ9NQC7 956 aa28.52■■■□□ 2.16
SNRPA1-215ENST00000561187 MBD1Q9UIS9 605 aaPredicted RBP28.52■■■□□ 2.16
SNRPA1-215ENST00000561187 NAGPAQ9UK23 515 aa28.52■■■□□ 2.16
SNRPA1-215ENST00000561187 LSM7Q9UK45 103 aaKnown RBP28.52■■■□□ 2.16
SNRPA1-215ENST00000561187 FAM237AA0A1B0GTK4 181 aa28.51■■■□□ 2.15
SNRPA1-215ENST00000561187 GREM1O60565 184 aa28.51■■■□□ 2.15
SNRPA1-215ENST00000561187 P2RY2P41231 377 aa28.51■■■□□ 2.15
SNRPA1-215ENST00000561187 PTGER3P43115 390 aa28.51■■■□□ 2.15
SNRPA1-215ENST00000561187 HSF5Q4G112 596 aaPredicted RBP28.51■■■□□ 2.15
SNRPA1-215ENST00000561187 PPP1R26Q5T8A7 1209 aaPredicted RBP28.51■■■□□ 2.15
SNRPA1-215ENST00000561187 GUF1Q8N442 669 aaKnown RBP28.51■■■□□ 2.15
SNRPA1-215ENST00000561187 DEFB119Q8N690 84 aa28.51■■■□□ 2.15
SNRPA1-215ENST00000561187 SEMA4DQ92854 862 aa28.51■■■□□ 2.15
SNRPA1-215ENST00000561187 CYP3A43Q9HB55 503 aa28.51■■■□□ 2.15
SNRPA1-215ENST00000561187 TMEM8AQ9HCN3 771 aa28.51■■■□□ 2.15
SNRPA1-215ENST00000561187 PLK2Q9NYY3 685 aa28.51■■■□□ 2.15
SNRPA1-215ENST00000561187 HCN2Q9UL51 889 aa28.51■■■□□ 2.15
SNRPA1-215ENST00000561187 KHNYNO15037 678 aaKnown RBP28.5■■■□□ 2.15
SNRPA1-215ENST00000561187 KRT37O76014 449 aa28.5■■■□□ 2.15
SNRPA1-215ENST00000561187 ZNF202O95125 648 aa28.5■■■□□ 2.15
SNRPA1-215ENST00000561187 KCNK5O95279 499 aa28.5■■■□□ 2.15
SNRPA1-215ENST00000561187 HOXB2P14652 356 aa28.5■■■□□ 2.15
SNRPA1-215ENST00000561187 TYRP14679 529 aa28.5■■■□□ 2.15
SNRPA1-215ENST00000561187 RPL13P26373 211 aaKnown RBP28.5■■■□□ 2.15
SNRPA1-215ENST00000561187 GOLGA8FQ08AF8 430 aa28.5■■■□□ 2.15
SNRPA1-215ENST00000561187 GOLGA8DPQ0D2H9 430 aa28.5■■■□□ 2.15
SNRPA1-215ENST00000561187 NFIL3Q16649 462 aa28.5■■■□□ 2.15
SNRPA1-215ENST00000561187 TOGARAM2Q6ZUX3 1019 aa28.5■■■□□ 2.15
SNRPA1-215ENST00000561187 HTR3DQ70Z44 454 aa28.5■■■□□ 2.15
SNRPA1-215ENST00000561187 LPCAT2Q7L5N7 544 aa28.5■■■□□ 2.15
SNRPA1-215ENST00000561187 ACOX2Q99424 681 aa28.5■■■□□ 2.15
SNRPA1-215ENST00000561187 ARID3AQ99856 593 aa28.5■■■□□ 2.15
SNRPA1-215ENST00000561187 LSM14BQ9BX40 385 aaKnown RBP28.5■■■□□ 2.15
SNRPA1-215ENST00000561187 MTPAPQ9NVV4 582 aaKnown RBP eCLIP28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms