RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 TMEM92Q6UXU6 159 aa17.12■□□□□ 0.33
SNX1-213ENST00000561026 HTR3DQ70Z44 454 aa17.12■□□□□ 0.33
SNX1-213ENST00000561026 C11orf74Q86VG3 221 aa17.12■□□□□ 0.33
SNX1-213ENST00000561026 EEF2KMTQ96G04 330 aa17.12■□□□□ 0.33
SNX1-213ENST00000561026 CCDC34Q96HJ3 373 aa17.12■□□□□ 0.33
SNX1-213ENST00000561026 SMOC1Q9H4F8 434 aa17.12■□□□□ 0.33
SNX1-213ENST00000561026 PCDHA5Q9Y5H7 936 aa17.12■□□□□ 0.33
SNX1-213ENST00000561026 BCLAF3A2AJT9 711 aaKnown RBP17.11■□□□□ 0.33
SNX1-213ENST00000561026 TBC1D3BA6NDS4 549 aa17.11■□□□□ 0.33
SNX1-213ENST00000561026 SGK1O00141 431 aa17.11■□□□□ 0.33
SNX1-213ENST00000561026 CYP26A1O43174 497 aa17.11■□□□□ 0.33
SNX1-213ENST00000561026 TULP3O75386 442 aa17.11■□□□□ 0.33
SNX1-213ENST00000561026 ALDH1A2O94788 518 aa17.11■□□□□ 0.33
SNX1-213ENST00000561026 CREB5Q02930 508 aa17.11■□□□□ 0.33
SNX1-213ENST00000561026 ANO4Q32M45 955 aa17.11■□□□□ 0.33
SNX1-213ENST00000561026 PREPLQ4J6C6 727 aaPredicted RBP17.11■□□□□ 0.33
SNX1-213ENST00000561026 EOGTQ5NDL2 527 aa17.11■□□□□ 0.33
SNX1-213ENST00000561026 IL31Q6EBC2 164 aa17.11■□□□□ 0.33
SNX1-213ENST00000561026 KLHDC10Q6PID8 442 aa17.11■□□□□ 0.33
SNX1-213ENST00000561026 SMYD4Q8IYR2 804 aaPredicted RBP17.11■□□□□ 0.33
SNX1-213ENST00000561026 NAT16Q8N8M0 369 aa17.11■□□□□ 0.33
SNX1-213ENST00000561026 KCNV2Q8TDN2 545 aa17.11■□□□□ 0.33
SNX1-213ENST00000561026 DDX1Q92499 740 aaKnown RBP17.11■□□□□ 0.33
SNX1-213ENST00000561026 SEMA4DQ92854 862 aa17.11■□□□□ 0.33
SNX1-213ENST00000561026 JAKMIP2Q96AA8 810 aa17.11■□□□□ 0.33
SNX1-213ENST00000561026 FAXDC2Q96IV6 333 aa17.11■□□□□ 0.33
SNX1-213ENST00000561026 DNAI2Q9GZS0 605 aa17.11■□□□□ 0.33
SNX1-213ENST00000561026 DEC1Q9P2X7 70 aa17.11■□□□□ 0.33
SNX1-213ENST00000561026 TM4SF5O14894 197 aa17.1■□□□□ 0.33
SNX1-213ENST00000561026 ADRB1P08588 477 aa17.1■□□□□ 0.33
SNX1-213ENST00000561026 KIF11P52732 1056 aa17.1■□□□□ 0.33
SNX1-213ENST00000561026 STPG1Q5TH74 334 aa17.1■□□□□ 0.33
SNX1-213ENST00000561026 PMS2CLQ68D20 193 aa17.1■□□□□ 0.33
SNX1-213ENST00000561026 TTC30AQ86WT1 665 aa17.1■□□□□ 0.33
SNX1-213ENST00000561026 OLIG1Q8TAK6 271 aa17.1■□□□□ 0.33
SNX1-213ENST00000561026 DUSP16Q9BY84 665 aa17.1■□□□□ 0.33
SNX1-213ENST00000561026 NMUR1Q9HB89 426 aa17.1■□□□□ 0.33
SNX1-213ENST00000561026 POLMQ9NP87 494 aaPredicted RBP17.1■□□□□ 0.33
SNX1-213ENST00000561026 ABCA7Q8IZY2 2146 aa17.1■□□□□ 0.33
SNX1-213ENST00000561026 MYH10P35580 1976 aa17.09■□□□□ 0.33
SNX1-213ENST00000561026 A0A1W2PQH9 124 aa17.09■□□□□ 0.33
SNX1-213ENST00000561026 CETN3O15182 167 aa17.09■□□□□ 0.33
SNX1-213ENST00000561026 ADAM23O75077 832 aa17.09■□□□□ 0.33
SNX1-213ENST00000561026 CAVIN2O95810 425 aa17.09■□□□□ 0.33
SNX1-213ENST00000561026 GOLGA8FQ08AF8 430 aa17.09■□□□□ 0.33
SNX1-213ENST00000561026 GOLGA8DPQ0D2H9 430 aa17.09■□□□□ 0.33
SNX1-213ENST00000561026 PNOCQ13519 176 aa17.09■□□□□ 0.33
SNX1-213ENST00000561026 ZNF394Q53GI3 561 aa17.09■□□□□ 0.33
SNX1-213ENST00000561026 PPP1R26Q5T8A7 1209 aaPredicted RBP17.09■□□□□ 0.33
SNX1-213ENST00000561026 NUDT18Q6ZVK8 323 aa17.09■□□□□ 0.33
SNX1-213ENST00000561026 FMR1NBQ8N0W7 255 aaPredicted RBP17.09■□□□□ 0.33
SNX1-213ENST00000561026 FBXL13Q8NEE6 735 aa17.09■□□□□ 0.33
SNX1-213ENST00000561026 HEXIM2Q96MH2 286 aaKnown RBP17.09■□□□□ 0.33
SNX1-213ENST00000561026 ZDHHC4Q9NPG8 344 aa17.09■□□□□ 0.33
SNX1-213ENST00000561026 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.09■□□□□ 0.33
SNX1-213ENST00000561026 RAB20Q9NX57 234 aa17.09■□□□□ 0.33
SNX1-213ENST00000561026 DNMT3LQ9UJW3 386 aa17.09■□□□□ 0.33
SNX1-213ENST00000561026 ACACBO00763 2458 aa17.09■□□□□ 0.33
SNX1-213ENST00000561026 STX10O60499 249 aa17.08■□□□□ 0.32
SNX1-213ENST00000561026 EPB41P11171 864 aaKnown RBP17.08■□□□□ 0.32
SNX1-213ENST00000561026 RARGP13631 454 aa17.08■□□□□ 0.32
SNX1-213ENST00000561026 BCKDHBP21953 392 aa17.08■□□□□ 0.32
SNX1-213ENST00000561026 PRCPP42785 496 aa17.08■□□□□ 0.32
SNX1-213ENST00000561026 PLA2G4AP47712 749 aa17.08■□□□□ 0.32
SNX1-213ENST00000561026 MXI1P50539 228 aa17.08■□□□□ 0.32
SNX1-213ENST00000561026 TCEAL6Q6IPX3 200 aa17.08■□□□□ 0.32
SNX1-213ENST00000561026 CCDC186Q7Z3E2 898 aa17.08■□□□□ 0.32
SNX1-213ENST00000561026 SCD5Q86SK9 330 aa17.08■□□□□ 0.32
SNX1-213ENST00000561026 ZNF276Q8N554 614 aa17.08■□□□□ 0.32
SNX1-213ENST00000561026 TTC39CQ8N584 583 aa17.08■□□□□ 0.32
SNX1-213ENST00000561026 TERB1Q8NA31 727 aa17.08■□□□□ 0.32
SNX1-213ENST00000561026 TCEAL3Q969E4 200 aa17.08■□□□□ 0.32
SNX1-213ENST00000561026 CISHQ9NSE2 258 aa17.08■□□□□ 0.32
SNX1-213ENST00000561026 RMND1Q9NWS8 449 aa17.08■□□□□ 0.32
SNX1-213ENST00000561026 LSM7Q9UK45 103 aaKnown RBP17.08■□□□□ 0.32
SNX1-213ENST00000561026 NUDT5Q9UKK9 219 aa17.08■□□□□ 0.32
SNX1-213ENST00000561026 GTF3C3Q9Y5Q9 886 aa17.08■□□□□ 0.32
SNX1-213ENST00000561026 USP3Q9Y6I4 520 aa17.08■□□□□ 0.32
SNX1-213ENST00000561026 NEDD8-MDP1E9PL57 170 aa17.07■□□□□ 0.32
SNX1-213ENST00000561026 MDM4O15151 490 aa17.07■□□□□ 0.32
SNX1-213ENST00000561026 TRIM24O15164 1050 aa17.07■□□□□ 0.32
SNX1-213ENST00000561026 CACNG3O60359 315 aa17.07■□□□□ 0.32
SNX1-213ENST00000561026 P2RY2P41231 377 aa17.07■□□□□ 0.32
SNX1-213ENST00000561026 PSEN1P49768 467 aa17.07■□□□□ 0.32
SNX1-213ENST00000561026 C10orf120Q5SQS8 335 aa17.07■□□□□ 0.32
SNX1-213ENST00000561026 C10orf76Q5T2E6 689 aa17.07■□□□□ 0.32
SNX1-213ENST00000561026 TRMT11Q7Z4G4 463 aaKnown RBP17.07■□□□□ 0.32
SNX1-213ENST00000561026 TADA2BQ86TJ2 420 aa17.07■□□□□ 0.32
SNX1-213ENST00000561026 ZNF513Q8N8E2 541 aaPredicted RBP17.07■□□□□ 0.32
SNX1-213ENST00000561026 RLN3Q8WXF3 142 aa17.07■□□□□ 0.32
SNX1-213ENST00000561026 TMEM176AQ96HP8 235 aa17.07■□□□□ 0.32
SNX1-213ENST00000561026 GSDMAQ96QA5 445 aa17.07■□□□□ 0.32
SNX1-213ENST00000561026 BBS2Q9BXC9 721 aa17.07■□□□□ 0.32
SNX1-213ENST00000561026 UBXN6Q9BZV1 441 aa17.07■□□□□ 0.32
SNX1-213ENST00000561026 FAM124BQ9H5Z6 455 aaPredicted RBP17.07■□□□□ 0.32
SNX1-213ENST00000561026 DNAJC17Q9NVM6 304 aaKnown RBP17.07■□□□□ 0.32
SNX1-213ENST00000561026 CLIC5Q9NZA1 410 aa17.07■□□□□ 0.32
SNX1-213ENST00000561026 MARK1Q9P0L2 795 aa17.07■□□□□ 0.32
SNX1-213ENST00000561026 BCCIPQ9P287 314 aaKnown RBP eCLIP17.07■□□□□ 0.32
SNX1-213ENST00000561026 WDR35Q9P2L0 1181 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms