RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 TMEM191CA6NGB0 347 aa17.33■□□□□ 0.37
TPM1-219ENST00000559397 E5RJQ4 531 aa17.33■□□□□ 0.37
TPM1-219ENST00000559397 MYO1FO00160 1098 aa17.33■□□□□ 0.37
TPM1-219ENST00000559397 PIK3R2O00459 728 aa17.33■□□□□ 0.37
TPM1-219ENST00000559397 LRG1P02750 347 aa17.33■□□□□ 0.37
TPM1-219ENST00000559397 ERBB2P04626 1255 aa17.33■□□□□ 0.37
TPM1-219ENST00000559397 HMGA1P17096 107 aaKnown RBP17.33■□□□□ 0.37
TPM1-219ENST00000559397 CTNNA1P35221 906 aaKnown RBP17.33■□□□□ 0.37
TPM1-219ENST00000559397 SLC1A1P43005 524 aa17.33■□□□□ 0.37
TPM1-219ENST00000559397 ACADSBP45954 432 aa17.33■□□□□ 0.37
TPM1-219ENST00000559397 GABRB2P47870 512 aa17.33■□□□□ 0.37
TPM1-219ENST00000559397 EPHB3P54753 998 aa17.33■□□□□ 0.37
TPM1-219ENST00000559397 USP46P62068 366 aa17.33■□□□□ 0.37
TPM1-219ENST00000559397 DCAF12L1Q5VU92 463 aa17.33■□□□□ 0.37
TPM1-219ENST00000559397 ELMSAN1Q6PJG2 1045 aa17.33■□□□□ 0.37
TPM1-219ENST00000559397 CPNE8Q86YQ8 564 aa17.33■□□□□ 0.37
TPM1-219ENST00000559397 MSANTD4Q8NCY6 345 aa17.33■□□□□ 0.37
TPM1-219ENST00000559397 C3orf20Q8ND61 904 aa17.33■□□□□ 0.37
TPM1-219ENST00000559397 ALG3Q92685 438 aa17.33■□□□□ 0.37
TPM1-219ENST00000559397 PSMG2Q969U7 264 aa17.33■□□□□ 0.37
TPM1-219ENST00000559397 TTLL2Q9BWV7 592 aa17.33■□□□□ 0.37
TPM1-219ENST00000559397 ST7Q9NRC1 585 aa17.33■□□□□ 0.37
TPM1-219ENST00000559397 DZANK1Q9NVP4 752 aa17.33■□□□□ 0.37
TPM1-219ENST00000559397 TMEM59LQ9UK28 342 aa17.33■□□□□ 0.37
TPM1-219ENST00000559397 ASB3Q9Y575 518 aa17.33■□□□□ 0.37
TPM1-219ENST00000559397 XIRP2A4UGR9 3374 aa17.33■□□□□ 0.37
TPM1-219ENST00000559397 FAM92AA1XBS5 289 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 CEP104O60308 925 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 POU2F2P09086 479 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 HNRNPA1P09651 372 aaKnown RBP eCLIP17.32■□□□□ 0.36
TPM1-219ENST00000559397 LCP1P13796 627 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 MAN1A1P33908 653 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 TKTL1P51854 596 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 ADIGQ0VDE8 80 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 DNAJB7Q7Z6W7 309 aaPredicted RBP17.32■□□□□ 0.36
TPM1-219ENST00000559397 MICALL1Q8N3F8 863 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 UBL4BQ8N7F7 174 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 CMASQ8NFW8 434 aaPredicted RBP17.32■□□□□ 0.36
TPM1-219ENST00000559397 KRT35Q92764 455 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 C18orf8Q96DM3 657 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 PRKD2Q9BZL6 878 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 ANKZF1Q9H8Y5 726 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 LRRC4Q9HBW1 653 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 COMMD8Q9NX08 183 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 WDR35Q9P2L0 1181 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 LCMT1Q9UIC8 334 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 PCDHA3Q9Y5H8 950 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 CCDC66A2RUB6 948 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 CCL16O15467 120 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 PAPSS1O43252 624 aaPredicted RBP17.32■□□□□ 0.36
TPM1-219ENST00000559397 SPOPO43791 374 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 RTN3O95197 1032 aaPredicted RBP17.32■□□□□ 0.36
TPM1-219ENST00000559397 CSH1P0DML2 217 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 CSH2P0DML3 217 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 H2AFXP16104 143 aaPredicted RBP17.32■□□□□ 0.36
TPM1-219ENST00000559397 C2orf54Q08AI8 447 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 ZNF268Q14587 947 aaPredicted RBP17.32■□□□□ 0.36
TPM1-219ENST00000559397 VEPH1Q14D04 833 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 ANKRD54Q6NXT1 300 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 DNAJC24Q6P3W2 148 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 C12orf76Q8N812 135 aaPredicted RBP17.32■□□□□ 0.36
TPM1-219ENST00000559397 ZNF707Q96C28 371 aaPredicted RBP17.32■□□□□ 0.36
TPM1-219ENST00000559397 MYRFLQ96LU7 910 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 ULBP1Q9BZM6 244 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 EPC1Q9H2F5 836 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 SFXN1Q9H9B4 322 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 CLEC1BQ9P126 229 aa17.32■□□□□ 0.36
TPM1-219ENST00000559397 CCDC195A0A1B0GUA6 201 aa17.31■□□□□ 0.36
TPM1-219ENST00000559397 PGRMC1O00264 195 aaKnown RBP17.31■□□□□ 0.36
TPM1-219ENST00000559397 TBX10O75333 385 aa17.31■□□□□ 0.36
TPM1-219ENST00000559397 SRGAP2BP0DMP2 458 aa17.31■□□□□ 0.36
TPM1-219ENST00000559397 FOSL2P15408 326 aa17.31■□□□□ 0.36
TPM1-219ENST00000559397 LTBRP36941 435 aa17.31■□□□□ 0.36
TPM1-219ENST00000559397 MARCKSL1P49006 195 aa17.31■□□□□ 0.36
TPM1-219ENST00000559397 RPL7AP62424 266 aaKnown RBP17.31■□□□□ 0.36
TPM1-219ENST00000559397 DLX2Q07687 328 aaPredicted RBP17.31■□□□□ 0.36
TPM1-219ENST00000559397 CYP4A22Q5TCH4 519 aa17.31■□□□□ 0.36
TPM1-219ENST00000559397 PM20D1Q6GTS8 502 aa17.31■□□□□ 0.36
TPM1-219ENST00000559397 SYCE2Q6PIF2 218 aa17.31■□□□□ 0.36
TPM1-219ENST00000559397 BHLHA9Q7RTU4 235 aa17.31■□□□□ 0.36
TPM1-219ENST00000559397 ITIH5Q86UX2 942 aa17.31■□□□□ 0.36
TPM1-219ENST00000559397 XYLT1Q86Y38 959 aa17.31■□□□□ 0.36
TPM1-219ENST00000559397 SCUBE3Q8IX30 993 aa17.31■□□□□ 0.36
TPM1-219ENST00000559397 SCML4Q8N228 414 aa17.31■□□□□ 0.36
TPM1-219ENST00000559397 IPO4Q8TEX9 1081 aaKnown RBP17.31■□□□□ 0.36
TPM1-219ENST00000559397 PABPC5Q96DU9 382 aaKnown RBP17.31■□□□□ 0.36
TPM1-219ENST00000559397 MCRS1Q96EZ8 462 aa17.31■□□□□ 0.36
TPM1-219ENST00000559397 TRMT2BQ96GJ1 504 aaKnown RBP17.31■□□□□ 0.36
TPM1-219ENST00000559397 LRRC3Q9BY71 257 aa17.31■□□□□ 0.36
TPM1-219ENST00000559397 CNGB3Q9NQW8 809 aa17.31■□□□□ 0.36
TPM1-219ENST00000559397 IP6K2Q9UHH9 426 aa17.31■□□□□ 0.36
TPM1-219ENST00000559397 SCML2Q9UQR0 700 aa17.31■□□□□ 0.36
TPM1-219ENST00000559397 SIGLEC16A6NMB1 481 aa17.3■□□□□ 0.36
TPM1-219ENST00000559397 GJB6O95452 261 aa17.3■□□□□ 0.36
TPM1-219ENST00000559397 USP17L7P0C7H9 530 aa17.3■□□□□ 0.36
TPM1-219ENST00000559397 YWHAQP27348 245 aa17.3■□□□□ 0.36
TPM1-219ENST00000559397 FAM183BPQ6ZVS7 135 aa17.3■□□□□ 0.36
TPM1-219ENST00000559397 TMC8Q8IU68 726 aa17.3■□□□□ 0.36
TPM1-219ENST00000559397 SIX6OS1Q8N1H7 587 aa17.3■□□□□ 0.36
TPM1-219ENST00000559397 CLEC4CQ8WTT0 213 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms