RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 HEXIM2Q96MH2 286 aaKnown RBP16.4■□□□□ 0.22
TPM1-211ENST00000558314 EDEM2Q9BV94 578 aa16.4■□□□□ 0.22
TPM1-211ENST00000558314 BBS2Q9BXC9 721 aa16.4■□□□□ 0.22
TPM1-211ENST00000558314 DNAI2Q9GZS0 605 aa16.4■□□□□ 0.22
TPM1-211ENST00000558314 DNAJC17Q9NVM6 304 aaKnown RBP16.4■□□□□ 0.22
TPM1-211ENST00000558314 IL37Q9NZH6 218 aa16.4■□□□□ 0.22
TPM1-211ENST00000558314 NAGPAQ9UK23 515 aa16.4■□□□□ 0.22
TPM1-211ENST00000558314 LSM7Q9UK45 103 aaKnown RBP16.4■□□□□ 0.22
TPM1-211ENST00000558314 MYOFQ9NZM1 2061 aa16.4■□□□□ 0.22
TPM1-211ENST00000558314 MYH10P35580 1976 aa16.4■□□□□ 0.22
TPM1-211ENST00000558314 MYO16Q9Y6X6 1858 aa16.39■□□□□ 0.22
TPM1-211ENST00000558314 EML5Q05BV3 1969 aa16.39■□□□□ 0.21
TPM1-211ENST00000558314 BCLAF3A2AJT9 711 aaKnown RBP16.39■□□□□ 0.21
TPM1-211ENST00000558314 HMBSP08397 361 aa16.39■□□□□ 0.21
TPM1-211ENST00000558314 ADRB1P08588 477 aa16.39■□□□□ 0.21
TPM1-211ENST00000558314 ZDHHC11BP0C7U3 371 aa16.39■□□□□ 0.21
TPM1-211ENST00000558314 RARGP13631 454 aa16.39■□□□□ 0.21
TPM1-211ENST00000558314 EIF2DP41214 584 aaKnown RBP16.39■□□□□ 0.21
TPM1-211ENST00000558314 TNFRSF4P43489 277 aa16.39■□□□□ 0.21
TPM1-211ENST00000558314 PNOCQ13519 176 aa16.39■□□□□ 0.21
TPM1-211ENST00000558314 DCAF17Q5H9S7 520 aaPredicted RBP16.39■□□□□ 0.21
TPM1-211ENST00000558314 PLA2G2CQ5R387 149 aa16.39■□□□□ 0.21
TPM1-211ENST00000558314 TCERG1LQ5VWI1 586 aa16.39■□□□□ 0.21
TPM1-211ENST00000558314 SNX30Q5VWJ9 437 aa16.39■□□□□ 0.21
TPM1-211ENST00000558314 GRAMD4Q6IC98 578 aa16.39■□□□□ 0.21
TPM1-211ENST00000558314 NUDT18Q6ZVK8 323 aa16.39■□□□□ 0.21
TPM1-211ENST00000558314 MIB1Q86YT6 1006 aa16.39■□□□□ 0.21
TPM1-211ENST00000558314 GUF1Q8N442 669 aaKnown RBP16.39■□□□□ 0.21
TPM1-211ENST00000558314 FRMD1Q8N878 549 aa16.39■□□□□ 0.21
TPM1-211ENST00000558314 ZNF513Q8N8E2 541 aaPredicted RBP16.39■□□□□ 0.21
TPM1-211ENST00000558314 WHAMMQ8TF30 809 aa16.39■□□□□ 0.21
TPM1-211ENST00000558314 CCDC34Q96HJ3 373 aa16.39■□□□□ 0.21
TPM1-211ENST00000558314 SPACA7Q96KW9 195 aa16.39■□□□□ 0.21
TPM1-211ENST00000558314 HNRNPABQ99729 332 aaKnown RBP16.39■□□□□ 0.21
TPM1-211ENST00000558314 CYP3A43Q9HB55 503 aa16.39■□□□□ 0.21
TPM1-211ENST00000558314 NMUR1Q9HB89 426 aa16.39■□□□□ 0.21
TPM1-211ENST00000558314 TMEM8AQ9HCN3 771 aa16.39■□□□□ 0.21
TPM1-211ENST00000558314 CSNK1G1Q9HCP0 422 aa16.39■□□□□ 0.21
TPM1-211ENST00000558314 OSER1Q9NX31 292 aa16.39■□□□□ 0.21
TPM1-211ENST00000558314 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.38■□□□□ 0.21
TPM1-211ENST00000558314 A0A1W2PQ27 194 aa16.38■□□□□ 0.21
TPM1-211ENST00000558314 A0A1W2PQ64 194 aa16.38■□□□□ 0.21
TPM1-211ENST00000558314 A0A1W2PQD8 194 aa16.38■□□□□ 0.21
TPM1-211ENST00000558314 GOLGA6L4A6NEF3 574 aa16.38■□□□□ 0.21
TPM1-211ENST00000558314 MAPK13O15264 365 aa16.38■□□□□ 0.21
TPM1-211ENST00000558314 CILPO75339 1184 aa16.38■□□□□ 0.21
TPM1-211ENST00000558314 KIR2DL1P43626 348 aaPredicted RBP16.38■□□□□ 0.21
TPM1-211ENST00000558314 PPP1R26Q5T8A7 1209 aaPredicted RBP16.38■□□□□ 0.21
TPM1-211ENST00000558314 PMS2CLQ68D20 193 aa16.38■□□□□ 0.21
TPM1-211ENST00000558314 KRT39Q6A163 491 aa16.38■□□□□ 0.21
TPM1-211ENST00000558314 RASSF3Q86WH2 238 aa16.38■□□□□ 0.21
TPM1-211ENST00000558314 TMEFF1Q8IYR6 380 aa16.38■□□□□ 0.21
TPM1-211ENST00000558314 DEFB119Q8N690 84 aa16.38■□□□□ 0.21
TPM1-211ENST00000558314 KIAA1958Q8N8K9 716 aa16.38■□□□□ 0.21
TPM1-211ENST00000558314 TMEM174Q8WUU8 243 aa16.38■□□□□ 0.21
TPM1-211ENST00000558314 DDX1Q92499 740 aaKnown RBP16.38■□□□□ 0.21
TPM1-211ENST00000558314 KLF16Q9BXK1 252 aaPredicted RBP16.38■□□□□ 0.21
TPM1-211ENST00000558314 RASAL2Q9UJF2 1139 aa16.38■□□□□ 0.21
TPM1-211ENST00000558314 SCML2Q9UQR0 700 aa16.38■□□□□ 0.21
TPM1-211ENST00000558314 KIAA1549LQ6ZVL6 1849 aa16.38■□□□□ 0.21
TPM1-211ENST00000558314 FAM92AA1XBS5 289 aa16.37■□□□□ 0.21
TPM1-211ENST00000558314 C4orf47A7E2U8 309 aa16.37■□□□□ 0.21
TPM1-211ENST00000558314 PATE3B3GLJ2 98 aa16.37■□□□□ 0.21
TPM1-211ENST00000558314 KHNYNO15037 678 aaKnown RBP16.37■□□□□ 0.21
TPM1-211ENST00000558314 CETN3O15182 167 aa16.37■□□□□ 0.21
TPM1-211ENST00000558314 HOXC11O43248 304 aaPredicted RBP16.37■□□□□ 0.21
TPM1-211ENST00000558314 ADAM23O75077 832 aa16.37■□□□□ 0.21
TPM1-211ENST00000558314 EPB41P11171 864 aaKnown RBP16.37■□□□□ 0.21
TPM1-211ENST00000558314 MXI1P50539 228 aa16.37■□□□□ 0.21
TPM1-211ENST00000558314 INCA1Q0VD86 236 aa16.37■□□□□ 0.21
TPM1-211ENST00000558314 UAP1L1Q3KQV9 507 aa16.37■□□□□ 0.21
TPM1-211ENST00000558314 PREPLQ4J6C6 727 aaPredicted RBP16.37■□□□□ 0.21
TPM1-211ENST00000558314 LPCAT2Q7L5N7 544 aa16.37■□□□□ 0.21
TPM1-211ENST00000558314 C11orf74Q86VG3 221 aa16.37■□□□□ 0.21
TPM1-211ENST00000558314 TERB1Q8NA31 727 aa16.37■□□□□ 0.21
TPM1-211ENST00000558314 SEMA4DQ92854 862 aa16.37■□□□□ 0.21
TPM1-211ENST00000558314 ERCC4Q92889 916 aaPredicted RBP16.37■□□□□ 0.21
TPM1-211ENST00000558314 XPO6Q96QU8 1125 aaKnown RBP16.37■□□□□ 0.21
TPM1-211ENST00000558314 PLK2Q9NYY3 685 aa16.37■□□□□ 0.21
TPM1-211ENST00000558314 PCDHA5Q9Y5H7 936 aa16.37■□□□□ 0.21
TPM1-211ENST00000558314 GTF3C3Q9Y5Q9 886 aa16.37■□□□□ 0.21
TPM1-211ENST00000558314 ATXN2Q99700 1313 aaKnown RBP16.37■□□□□ 0.21
TPM1-211ENST00000558314 ABCA7Q8IZY2 2146 aa16.36■□□□□ 0.21
TPM1-211ENST00000558314 FAM237AA0A1B0GTK4 181 aa16.36■□□□□ 0.21
TPM1-211ENST00000558314 HHLA1C9JL84 531 aa16.36■□□□□ 0.21
TPM1-211ENST00000558314 ZBTB24O43167 697 aaPredicted RBP16.36■□□□□ 0.21
TPM1-211ENST00000558314 RALAP11233 206 aa16.36■□□□□ 0.21
TPM1-211ENST00000558314 HOXB2P14652 356 aa16.36■□□□□ 0.21
TPM1-211ENST00000558314 TYRP14679 529 aa16.36■□□□□ 0.21
TPM1-211ENST00000558314 LIMK1P53667 647 aa16.36■□□□□ 0.21
TPM1-211ENST00000558314 EFEMP1Q12805 493 aa16.36■□□□□ 0.21
TPM1-211ENST00000558314 NFIL3Q16649 462 aa16.36■□□□□ 0.21
TPM1-211ENST00000558314 N4BP2L1Q5TBK1 243 aaPredicted RBP16.36■□□□□ 0.21
TPM1-211ENST00000558314 EGFLAMQ63HQ2 1017 aa16.36■□□□□ 0.21
TPM1-211ENST00000558314 SDE2Q6IQ49 451 aa16.36■□□□□ 0.21
TPM1-211ENST00000558314 HTR3DQ70Z44 454 aa16.36■□□□□ 0.21
TPM1-211ENST00000558314 TRMT11Q7Z4G4 463 aaKnown RBP16.36■□□□□ 0.21
TPM1-211ENST00000558314 ETFBKMTQ8IXQ9 262 aa16.36■□□□□ 0.21
TPM1-211ENST00000558314 CHPFQ8IZ52 775 aa16.36■□□□□ 0.21
TPM1-211ENST00000558314 FBXL13Q8NEE6 735 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms