RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 PLA2G2AP14555 144 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 JUPP14923 745 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 NDUFV2P19404 249 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 LMO2P25791 158 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 GNL1P36915 607 aaPredicted RBP5.51□□□□□ -1.53
SPG11-208ENST00000558155 UBA7P41226 1012 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 ZNF131P52739 623 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 ZNF132P52740 706 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 PRSS12P56730 875 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 USP46P62068 366 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 STARD3Q14849 445 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 SMAD1Q15797 465 aaKnown RBP5.51□□□□□ -1.53
SPG11-208ENST00000558155 SOWAHAQ2M3V2 549 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 RILPL1Q5EBL4 403 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 KIAA1324Q6UXG2 1013 aaKnown RBP5.51□□□□□ -1.53
SPG11-208ENST00000558155 HS2ST1Q7LGA3 356 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 ZNF720Q7Z2F6 126 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 TMPRSS12Q86WS5 348 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 TMEM25Q86YD3 366 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 ETFBKMTQ8IXQ9 262 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 NUP93Q8N1F7 819 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 C1orf127Q8N9H9 656 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 PDZD8Q8NEN9 1154 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 PIP4K2CQ8TBX8 421 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 MYCBPAPQ8TBZ2 947 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 OVCA2Q8WZ82 227 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 MYLPFQ96A32 169 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 TOE1Q96GM8 510 aaKnown RBP5.51□□□□□ -1.53
SPG11-208ENST00000558155 MRGPRX1Q96LB2 322 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 GABRG3Q99928 467 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 DUSP9Q99956 384 aaKnown RBP5.51□□□□□ -1.53
SPG11-208ENST00000558155 FAM213AQ9BRX8 229 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 NUP58Q9BVL2 599 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 GPR174Q9BXC1 333 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 ST6GALNAC4Q9H4F1 302 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 PRORYQ9H606 182 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 DNAJC17Q9NVM6 304 aaKnown RBP5.51□□□□□ -1.53
SPG11-208ENST00000558155 TOR4AQ9NXH8 423 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 WSB2Q9NYS7 404 aaPredicted RBP5.51□□□□□ -1.53
SPG11-208ENST00000558155 CHORDC1Q9UHD1 332 aaPredicted RBP5.51□□□□□ -1.53
SPG11-208ENST00000558155 LIMCH1Q9UPQ0 1083 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 AK5Q9Y6K8 562 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 KNL1Q8NG31 2342 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 FRYQ5TBA9 3013 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 MYH10P35580 1976 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 TEX51A0A1B0GUA7 166 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 FAM149AA5PLN7 773 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 VWA3AA6NCI4 1184 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 TISP43B9A030 160 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 F8VP50 259 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 NPC1O15118 1278 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 HCRTO43612 131 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 DFNA5O60443 496 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 SYNCRIPO60506 623 aaKnown RBP5.5□□□□□ -1.53
SPG11-208ENST00000558155 C1QL1O75973 258 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 TNNC2P02585 160 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 C1SP09871 688 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 TMEM191BP0C7N4 346 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 GARTP22102 1010 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 WARSP23381 471 aaKnown RBP5.5□□□□□ -1.53
SPG11-208ENST00000558155 ADSSP30520 456 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 DDIT3P35638 169 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 EIF2S3P41091 472 aaKnown RBP5.5□□□□□ -1.53
SPG11-208ENST00000558155 PSMC1P62191 440 aaKnown RBP5.5□□□□□ -1.53
SPG11-208ENST00000558155 CFHR1Q03591 330 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 IFRD2Q12894 506 aaPredicted RBP5.5□□□□□ -1.53
SPG11-208ENST00000558155 MCM6Q14566 821 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 SF3A1Q15459 793 aaKnown RBP5.5□□□□□ -1.53
SPG11-208ENST00000558155 SURF1Q15526 300 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 TEAD4Q15561 434 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 TMEM119Q4V9L6 283 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 CCDC157Q569K6 752 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 C6orf118Q5T5N4 469 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 DCAF12L1Q5VU92 463 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 EGFLAMQ63HQ2 1017 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 ARL6IP4Q66PJ3 421 aaKnown RBP5.5□□□□□ -1.53
SPG11-208ENST00000558155 HTR3DQ70Z44 454 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 GPR155Q7Z3F1 870 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 MARCH9Q86YJ5 346 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 MIB1Q86YT6 1006 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 CCDC83Q8IWF9 413 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 BRSK2Q8IWQ3 736 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 BBS7Q8IWZ6 715 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 SYCP3Q8IZU3 236 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 ZNF843Q8N446 348 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 ZCCHC9Q8N567 271 aaKnown RBP5.5□□□□□ -1.53
SPG11-208ENST00000558155 RASSF8Q8NHQ8 419 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 BAHD1Q8TBE0 780 aaPredicted RBP5.5□□□□□ -1.53
SPG11-208ENST00000558155 UCMAQ8WVF2 138 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 BAP1Q92560 729 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 TATDN2Q93075 761 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 FBXO32Q969P5 355 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 HVCN1Q96D96 273 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 ERLEC1Q96DZ1 483 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 SIPA1Q96FS4 1042 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 CRELD1Q96HD1 420 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 PCED1BQ96HM7 432 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 HPDLQ96IR7 371 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 ANKRD36BP1Q96IX9 119 aa5.5□□□□□ -1.53
SPG11-208ENST00000558155 ZSCAN31Q96LW9 406 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms