RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 USP49Q70CQ1 688 aa4.01□□□□□ -1.77
SPG11-206ENST00000558093 NEK8Q86SG6 692 aa4.01□□□□□ -1.77
SPG11-206ENST00000558093 C16orf71Q8IYS4 520 aaPredicted RBP4.01□□□□□ -1.77
SPG11-206ENST00000558093 METTL25Q8N6Q8 603 aa4.01□□□□□ -1.77
SPG11-206ENST00000558093 WDYHV1Q96HA8 205 aa4.01□□□□□ -1.77
SPG11-206ENST00000558093 TBCBQ99426 244 aa4.01□□□□□ -1.77
SPG11-206ENST00000558093 USP29Q9HBJ7 922 aa4.01□□□□□ -1.77
SPG11-206ENST00000558093 PDGFCQ9NRA1 345 aa4.01□□□□□ -1.77
SPG11-206ENST00000558093 SLC27A6Q9Y2P4 619 aa4.01□□□□□ -1.77
SPG11-206ENST00000558093 WDR91A4D1P6 747 aa4□□□□□ -1.77
SPG11-206ENST00000558093 CAND2O75155 1236 aa4□□□□□ -1.77
SPG11-206ENST00000558093 CYP2A6P11509 494 aaPredicted RBP4□□□□□ -1.77
SPG11-206ENST00000558093 TSHRP16473 764 aa4□□□□□ -1.77
SPG11-206ENST00000558093 FGFR2P21802 821 aa4□□□□□ -1.77
SPG11-206ENST00000558093 GNALP38405 381 aa4□□□□□ -1.77
SPG11-206ENST00000558093 CASP5P51878 434 aa4□□□□□ -1.77
SPG11-206ENST00000558093 KCNB1Q14721 858 aa4□□□□□ -1.77
SPG11-206ENST00000558093 CLCA4Q14CN2 919 aa4□□□□□ -1.77
SPG11-206ENST00000558093 LONRF1Q17RB8 773 aa4□□□□□ -1.77
SPG11-206ENST00000558093 TMEM63BQ5T3F8 832 aa4□□□□□ -1.77
SPG11-206ENST00000558093 FAXCQ5TGI0 409 aa4□□□□□ -1.77
SPG11-206ENST00000558093 ZNF626Q68DY1 528 aa4□□□□□ -1.77
SPG11-206ENST00000558093 SLC18B1Q6NT16 456 aa4□□□□□ -1.77
SPG11-206ENST00000558093 VSTM1Q6UX27 236 aa4□□□□□ -1.77
SPG11-206ENST00000558093 TXLNBQ8N3L3 684 aa4□□□□□ -1.77
SPG11-206ENST00000558093 PJA1Q8NG27 643 aa4□□□□□ -1.77
SPG11-206ENST00000558093 MBD3L2Q8NHZ7 208 aaPredicted RBP4□□□□□ -1.77
SPG11-206ENST00000558093 SMG7Q92540 1137 aaKnown RBP4□□□□□ -1.77
SPG11-206ENST00000558093 CTHRC1Q96CG8 243 aa4□□□□□ -1.77
SPG11-206ENST00000558093 ZDHHC12Q96GR4 267 aa4□□□□□ -1.77
SPG11-206ENST00000558093 FAM118BQ9BPY3 351 aa4□□□□□ -1.77
SPG11-206ENST00000558093 EFHD1Q9BUP0 239 aa4□□□□□ -1.77
SPG11-206ENST00000558093 PCGF6Q9BYE7 350 aa4□□□□□ -1.77
SPG11-206ENST00000558093 GEMIN8Q9NWZ8 242 aaKnown RBP4□□□□□ -1.77
SPG11-206ENST00000558093 ASIC5Q9NY37 505 aa4□□□□□ -1.77
SPG11-206ENST00000558093 TMOD4Q9NZQ9 345 aa4□□□□□ -1.77
SPG11-206ENST00000558093 RNF7Q9UBF6 113 aa4□□□□□ -1.77
SPG11-206ENST00000558093 VPS51Q9UID3 782 aa4□□□□□ -1.77
SPG11-206ENST00000558093 ZNF804BA4D1E1 1349 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 WDR17Q8IZU2 1322 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.99□□□□□ -1.77
SPG11-206ENST00000558093 CLCA1A8K7I4 914 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 KCNU1A8MYU2 1149 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 DSCR3O14972 297 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 PRC1O43663 620 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 COQ9O75208 318 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 WDR47O94967 919 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 LATS1O95835 1130 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 APEHP13798 732 aaKnown RBP3.99□□□□□ -1.77
SPG11-206ENST00000558093 SLC5A1P13866 664 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 MCM5P33992 734 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 ZNF81P51508 661 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 COPAP53621 1224 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 PICALMQ13492 652 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 MFSD13AQ14CX5 517 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 LARS2Q15031 903 aaKnown RBP3.99□□□□□ -1.77
SPG11-206ENST00000558093 SUPT20HL1Q3ZLR7 823 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 AWAT1Q58HT5 328 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 SLC2A7Q6PXP3 512 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 KRT28Q7Z3Y7 464 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 GALNT16Q8N428 558 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 PNPLA1Q8N8W4 532 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 FAM71DQ8N9W8 422 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 C8orf58Q8NAV2 365 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 OSR1Q8TAX0 266 aaPredicted RBP3.99□□□□□ -1.77
SPG11-206ENST00000558093 ZC3H10Q96K80 434 aaKnown RBP3.99□□□□□ -1.77
SPG11-206ENST00000558093 FAM227BQ96M60 508 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 CINPQ9BW66 212 aaPredicted RBP3.99□□□□□ -1.77
SPG11-206ENST00000558093 QTRT1Q9BXR0 403 aaKnown RBP3.99□□□□□ -1.77
SPG11-206ENST00000558093 AS3MTQ9HBK9 375 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 ZBTB26Q9HCK0 441 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 STARD7Q9NQZ5 370 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 KLHL13Q9P2N7 655 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 ZNF70Q9UC06 446 aaPredicted RBP3.99□□□□□ -1.77
SPG11-206ENST00000558093 ASAP1Q9ULH1 1129 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 MAFFQ9ULX9 164 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 CAPN11Q9UMQ6 739 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 CEP83Q9Y592 693 aa3.99□□□□□ -1.77
SPG11-206ENST00000558093 SMIM35A0A1B0GVV1 85 aa3.98□□□□□ -1.77
SPG11-206ENST00000558093 A0A1W2PPC4 97 aa3.98□□□□□ -1.77
SPG11-206ENST00000558093 TCRBV5S1A1TA0A578 114 aa3.98□□□□□ -1.77
SPG11-206ENST00000558093 AREL1O15033 823 aa3.98□□□□□ -1.77
SPG11-206ENST00000558093 CA12O43570 354 aa3.98□□□□□ -1.77
SPG11-206ENST00000558093 MYL1P05976 194 aa3.98□□□□□ -1.77
SPG11-206ENST00000558093 DRD1P21728 446 aa3.98□□□□□ -1.77
SPG11-206ENST00000558093 MMP13P45452 471 aa3.98□□□□□ -1.77
SPG11-206ENST00000558093 DEUP1Q05D60 604 aa3.98□□□□□ -1.77
SPG11-206ENST00000558093 CCDC15Q0P6D6 951 aa3.98□□□□□ -1.77
SPG11-206ENST00000558093 PMS2P11Q13670 270 aa3.98□□□□□ -1.77
SPG11-206ENST00000558093 MORN5Q5VZ52 161 aa3.98□□□□□ -1.77
SPG11-206ENST00000558093 MRNIPQ6NTE8 343 aa3.98□□□□□ -1.77
SPG11-206ENST00000558093 FBXO38Q6PIJ6 1188 aa3.98□□□□□ -1.77
SPG11-206ENST00000558093 USP17L6PQ6QN14 398 aa3.98□□□□□ -1.77
SPG11-206ENST00000558093 C11orf96Q7Z7L8 435 aa3.98□□□□□ -1.77
SPG11-206ENST00000558093 LINC01465Q8N7H1 131 aa3.98□□□□□ -1.77
SPG11-206ENST00000558093 C12orf76Q8N812 135 aaPredicted RBP3.98□□□□□ -1.77
SPG11-206ENST00000558093 DENND1AQ8TEH3 1009 aa3.98□□□□□ -1.77
SPG11-206ENST00000558093 PARD3BQ8TEW8 1205 aa3.98□□□□□ -1.77
SPG11-206ENST00000558093 ABHD5Q8WTS1 349 aa3.98□□□□□ -1.77
SPG11-206ENST00000558093 CUL5Q93034 780 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms