RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 EYSQ5T1H1 3165 aa14.97□□□□□ -0.01
CHD8-208ENST00000555301 FAM170AA1A519 330 aa14.96□□□□□ -0.01
CHD8-208ENST00000555301 C2orf78A6NCI8 922 aa14.96□□□□□ -0.01
CHD8-208ENST00000555301 NRG2O14511 850 aaPredicted RBP14.96□□□□□ -0.01
CHD8-208ENST00000555301 CAPN9O14815 690 aa14.96□□□□□ -0.01
CHD8-208ENST00000555301 NRDCO43847 1150 aa14.96□□□□□ -0.01
CHD8-208ENST00000555301 OLFM2O95897 454 aa14.96□□□□□ -0.01
CHD8-208ENST00000555301 CKMP06732 381 aa14.96□□□□□ -0.01
CHD8-208ENST00000555301 LAMP2P13473 410 aa14.96□□□□□ -0.01
CHD8-208ENST00000555301 HDCP19113 662 aa14.96□□□□□ -0.01
CHD8-208ENST00000555301 ATP5C1P36542 298 aaKnown RBP14.96□□□□□ -0.01
CHD8-208ENST00000555301 PGFP49763 221 aa14.96□□□□□ -0.01
CHD8-208ENST00000555301 C2CD6Q53TS8 623 aa14.96□□□□□ -0.01
CHD8-208ENST00000555301 STXBP5Q5T5C0 1151 aa14.96□□□□□ -0.01
CHD8-208ENST00000555301 RSRC2Q7L4I2 434 aaKnown RBP14.96□□□□□ -0.01
CHD8-208ENST00000555301 CMTM8Q8IZV2 173 aa14.96□□□□□ -0.01
CHD8-208ENST00000555301 PLCD3Q8N3E9 789 aa14.96□□□□□ -0.01
CHD8-208ENST00000555301 C3orf20Q8ND61 904 aa14.96□□□□□ -0.01
CHD8-208ENST00000555301 CCDC112Q8NEF3 446 aa14.96□□□□□ -0.01
CHD8-208ENST00000555301 RNF139Q8WU17 664 aa14.96□□□□□ -0.01
CHD8-208ENST00000555301 PDLIM2Q96JY6 352 aa14.96□□□□□ -0.01
CHD8-208ENST00000555301 MYADMQ96S97 322 aa14.96□□□□□ -0.01
CHD8-208ENST00000555301 CCSER2Q9H7U1 834 aa14.96□□□□□ -0.01
CHD8-208ENST00000555301 OSER1Q9NX31 292 aa14.96□□□□□ -0.01
CHD8-208ENST00000555301 EPS15L1Q9UBC2 864 aa14.96□□□□□ -0.01
CHD8-208ENST00000555301 NENFQ9UMX5 172 aa14.96□□□□□ -0.01
CHD8-208ENST00000555301 ANKRD62A6NC57 917 aa14.95□□□□□ -0.02
CHD8-208ENST00000555301 GOLGA8SH3BPF8 625 aa14.95□□□□□ -0.02
CHD8-208ENST00000555301 COCHO43405 550 aa14.95□□□□□ -0.02
CHD8-208ENST00000555301 IPO7O95373 1038 aaKnown RBP14.95□□□□□ -0.02
CHD8-208ENST00000555301 NCAM1P13591 858 aa14.95□□□□□ -0.02
CHD8-208ENST00000555301 KCNQ1P51787 676 aa14.95□□□□□ -0.02
CHD8-208ENST00000555301 C10orf120Q5SQS8 335 aa14.95□□□□□ -0.02
CHD8-208ENST00000555301 C10orf76Q5T2E6 689 aa14.95□□□□□ -0.02
CHD8-208ENST00000555301 DNAJC24Q6P3W2 148 aa14.95□□□□□ -0.02
CHD8-208ENST00000555301 HFE2Q6ZVN8 426 aa14.95□□□□□ -0.02
CHD8-208ENST00000555301 ARCQ7LC44 396 aa14.95□□□□□ -0.02
CHD8-208ENST00000555301 ARL14EPQ8N8R7 260 aaPredicted RBP14.95□□□□□ -0.02
CHD8-208ENST00000555301 ZSCAN18Q8TBC5 510 aaPredicted RBP14.95□□□□□ -0.02
CHD8-208ENST00000555301 EDEM1Q92611 657 aa14.95□□□□□ -0.02
CHD8-208ENST00000555301 SMARCD2Q92925 531 aa14.95□□□□□ -0.02
CHD8-208ENST00000555301 PIWIL1Q96J94 861 aaKnown RBP14.95□□□□□ -0.02
CHD8-208ENST00000555301 RPGRIP1Q96KN7 1286 aa14.95□□□□□ -0.02
CHD8-208ENST00000555301 ZSWIM3Q96MP5 696 aa14.95□□□□□ -0.02
CHD8-208ENST00000555301 ASB16Q96NS5 453 aa14.95□□□□□ -0.02
CHD8-208ENST00000555301 ASB2Q96Q27 587 aa14.95□□□□□ -0.02
CHD8-208ENST00000555301 SELENOOQ9BVL4 669 aa14.95□□□□□ -0.02
CHD8-208ENST00000555301 LUC7LQ9NQ29 371 aaKnown RBP14.95□□□□□ -0.02
CHD8-208ENST00000555301 SPTLC3Q9NUV7 552 aa14.95□□□□□ -0.02
CHD8-208ENST00000555301 PARVAQ9NVD7 372 aa14.95□□□□□ -0.02
CHD8-208ENST00000555301 DNMT3LQ9UJW3 386 aa14.95□□□□□ -0.02
CHD8-208ENST00000555301 SCINQ9Y6U3 715 aa14.95□□□□□ -0.02
CHD8-208ENST00000555301 REV3LO60673 3130 aa14.95□□□□□ -0.02
CHD8-208ENST00000555301 SOWAHDA6NJG2 315 aa14.94□□□□□ -0.02
CHD8-208ENST00000555301 EIF3CLB5ME19 914 aaKnown RBP14.94□□□□□ -0.02
CHD8-208ENST00000555301 DAB1O75553 588 aa14.94□□□□□ -0.02
CHD8-208ENST00000555301 LCA5LO95447 670 aa14.94□□□□□ -0.02
CHD8-208ENST00000555301 H2AFZP0C0S5 128 aa14.94□□□□□ -0.02
CHD8-208ENST00000555301 KRT3P12035 628 aa14.94□□□□□ -0.02
CHD8-208ENST00000555301 RRM1P23921 792 aa14.94□□□□□ -0.02
CHD8-208ENST00000555301 SLC7A9P82251 487 aa14.94□□□□□ -0.02
CHD8-208ENST00000555301 SPA17Q15506 151 aa14.94□□□□□ -0.02
CHD8-208ENST00000555301 TAF5Q15542 800 aa14.94□□□□□ -0.02
CHD8-208ENST00000555301 H2AFVQ71UI9 128 aa14.94□□□□□ -0.02
CHD8-208ENST00000555301 MTSS1LQ765P7 747 aa14.94□□□□□ -0.02
CHD8-208ENST00000555301 TMEM139Q8IV31 216 aa14.94□□□□□ -0.02
CHD8-208ENST00000555301 ARID3BQ8IVW6 561 aaPredicted RBP14.94□□□□□ -0.02
CHD8-208ENST00000555301 LRRC8AQ8IWT6 810 aa14.94□□□□□ -0.02
CHD8-208ENST00000555301 ADHFE1Q8IWW8 467 aa14.94□□□□□ -0.02
CHD8-208ENST00000555301 ZDHHC14Q8IZN3 488 aa14.94□□□□□ -0.02
CHD8-208ENST00000555301 DEFB106AQ8N104 65 aa14.94□□□□□ -0.02
CHD8-208ENST00000555301 KHSRPQ92945 711 aaKnown RBP eCLIP14.94□□□□□ -0.02
CHD8-208ENST00000555301 E2F7Q96AV8 911 aa14.94□□□□□ -0.02
CHD8-208ENST00000555301 ZNF653Q96CK0 615 aa14.94□□□□□ -0.02
CHD8-208ENST00000555301 SLC2A13Q96QE2 648 aa14.94□□□□□ -0.02
CHD8-208ENST00000555301 CYP2S1Q96SQ9 504 aa14.94□□□□□ -0.02
CHD8-208ENST00000555301 EIF3CQ99613 913 aaKnown RBP14.94□□□□□ -0.02
CHD8-208ENST00000555301 RNF38Q9H0F5 515 aa14.94□□□□□ -0.02
CHD8-208ENST00000555301 KIF9Q9HAQ2 790 aa14.94□□□□□ -0.02
CHD8-208ENST00000555301 TRPV4Q9HBA0 871 aa14.94□□□□□ -0.02
CHD8-208ENST00000555301 MRPL47Q9HD33 250 aaKnown RBP14.94□□□□□ -0.02
CHD8-208ENST00000555301 TDP1Q9NUW8 608 aa14.94□□□□□ -0.02
CHD8-208ENST00000555301 RRN3Q9NYV6 651 aa14.94□□□□□ -0.02
CHD8-208ENST00000555301 CNOT8Q9UFF9 292 aaKnown RBP14.94□□□□□ -0.02
CHD8-208ENST00000555301 ARHGAP26Q9UNA1 814 aa14.94□□□□□ -0.02
CHD8-208ENST00000555301 EPN1Q9Y6I3 576 aaPredicted RBP14.94□□□□□ -0.02
CHD8-208ENST00000555301 SIGLEC16A6NMB1 481 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 C2CD4DB7Z1M9 353 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 DPYSL4O14531 572 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 GRAP2O75791 330 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 NDUFA10O95299 355 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 TBX18O95935 607 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 FYNP06241 537 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 PTMAP06454 111 aaKnown RBP14.93□□□□□ -0.02
CHD8-208ENST00000555301 MBL2P11226 248 aaPredicted RBP14.93□□□□□ -0.02
CHD8-208ENST00000555301 ABCB4P21439 1286 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 SP100P23497 879 aaPredicted RBP14.93□□□□□ -0.02
CHD8-208ENST00000555301 NOS2P35228 1153 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 MATKP42679 507 aa14.93□□□□□ -0.02
CHD8-208ENST00000555301 GALCP54803 685 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms