RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 GLP2RO95838 553 aa18.2■□□□□ 0.5
SHOX-204ENST00000554971 PDGFRBP09619 1106 aa18.2■□□□□ 0.5
SHOX-204ENST00000554971 PYGMP11217 842 aa18.2■□□□□ 0.5
SHOX-204ENST00000554971 P4HA1P13674 534 aa18.2■□□□□ 0.5
SHOX-204ENST00000554971 CD58P19256 250 aa18.2■□□□□ 0.5
SHOX-204ENST00000554971 FLT3P36888 993 aa18.2■□□□□ 0.5
SHOX-204ENST00000554971 COILP38432 576 aaPredicted RBP18.2■□□□□ 0.5
SHOX-204ENST00000554971 LHX1P48742 406 aa18.2■□□□□ 0.5
SHOX-204ENST00000554971 PMS2P54278 862 aa18.2■□□□□ 0.5
SHOX-204ENST00000554971 ORC1Q13415 861 aa18.2■□□□□ 0.5
SHOX-204ENST00000554971 BYSLQ13895 437 aaKnown RBP18.2■□□□□ 0.5
SHOX-204ENST00000554971 LILRA6Q6PI73 481 aa18.2■□□□□ 0.5
SHOX-204ENST00000554971 CCDC137Q6PK04 289 aaKnown RBP18.2■□□□□ 0.5
SHOX-204ENST00000554971 METTL23Q86XA0 190 aa18.2■□□□□ 0.5
SHOX-204ENST00000554971 MICALL1Q8N3F8 863 aa18.2■□□□□ 0.5
SHOX-204ENST00000554971 LPIN3Q9BQK8 851 aa18.2■□□□□ 0.5
SHOX-204ENST00000554971 ACBD6Q9BR61 282 aa18.2■□□□□ 0.5
SHOX-204ENST00000554971 TMLHEQ9NVH6 421 aa18.2■□□□□ 0.5
SHOX-204ENST00000554971 HCFC2Q9Y5Z7 792 aa18.2■□□□□ 0.5
SHOX-204ENST00000554971 TMEM110-MUSTN1A8MSY1 372 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 LINC01565O15544 149 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 CILPO75339 1184 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 ADH1AP07327 375 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 PAEPP09466 180 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 KRT5P13647 590 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 ACO1P21399 889 aaKnown RBP18.19■□□□□ 0.5
SHOX-204ENST00000554971 TBXAS1P24557 533 aaPredicted RBP18.19■□□□□ 0.5
SHOX-204ENST00000554971 GNL1P36915 607 aaPredicted RBP18.19■□□□□ 0.5
SHOX-204ENST00000554971 ATP1A2P50993 1020 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 PSMC1P62191 440 aaKnown RBP18.19■□□□□ 0.5
SHOX-204ENST00000554971 PPP2R2AP63151 447 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 RAB33AQ14088 237 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 MCOLN2Q8IZK6 566 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 OR6B3Q8NGW1 331 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 PGM2Q96G03 612 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 EMILIN2Q9BXX0 1053 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 ZCWPW1Q9H0M4 648 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 CYP3A43Q9HB55 503 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 CRTAC1Q9NQ79 661 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 CISHQ9NSE2 258 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 CNTN6Q9UQ52 1028 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 C2orf16Q68DN1 1984 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 A0A087WUV0 522 aaPredicted RBP18.19■□□□□ 0.5
SHOX-204ENST00000554971 ABLIM3O94929 683 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 CYP1A1P04798 512 aaPredicted RBP18.19■□□□□ 0.5
SHOX-204ENST00000554971 FAM163BP0C2L3 166 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 SPATA31D3P0C874 917 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 EPCAMP16422 314 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 KLRC2P26717 231 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 NDST1P52848 882 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 ARPP19P56211 112 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 CREMQ03060 361 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 CENPCQ03188 943 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 IFFO1Q0D2I5 559 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 COL19A1Q14993 1142 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 ZDHHC24Q6UX98 284 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 SPATA31D4Q6ZUB0 917 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 YTHDF3Q7Z739 585 aaKnown RBP18.19■□□□□ 0.5
SHOX-204ENST00000554971 FEZF2Q8TBJ5 459 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 SLC22A17Q8WUG5 538 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 PPM1EQ8WY54 764 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 CENPTQ96BT3 561 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 CRISPLD1Q9H336 500 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 IGFLR1Q9H665 355 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 GRHL1Q9NZI5 618 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 SLC12A6Q9UHW9 1150 aa18.19■□□□□ 0.5
SHOX-204ENST00000554971 BARX2Q9UMQ3 279 aaPredicted RBP18.19■□□□□ 0.5
SHOX-204ENST00000554971 MYBPHLA2RUH7 354 aa18.18■□□□□ 0.5
SHOX-204ENST00000554971 OR6C75A6NL08 312 aa18.18■□□□□ 0.5
SHOX-204ENST00000554971 FAM107AO95990 144 aa18.18■□□□□ 0.5
SHOX-204ENST00000554971 CCDC85BQ15834 202 aaPredicted RBP18.18■□□□□ 0.5
SHOX-204ENST00000554971 KRT71Q3SY84 523 aa18.18■□□□□ 0.5
SHOX-204ENST00000554971 INTS6LQ5JSJ4 861 aaKnown RBP18.18■□□□□ 0.5
SHOX-204ENST00000554971 LIN9Q5TKA1 542 aa18.18■□□□□ 0.5
SHOX-204ENST00000554971 RNF19BQ6ZMZ0 732 aa18.18■□□□□ 0.5
SHOX-204ENST00000554971 ZNF461Q8TAF7 563 aa18.18■□□□□ 0.5
SHOX-204ENST00000554971 ART4Q93070 314 aa18.18■□□□□ 0.5
SHOX-204ENST00000554971 TLCD1Q96CP7 247 aa18.18■□□□□ 0.5
SHOX-204ENST00000554971 C18orf8Q96DM3 657 aa18.18■□□□□ 0.5
SHOX-204ENST00000554971 STMN4Q9H169 189 aaPredicted RBP18.18■□□□□ 0.5
SHOX-204ENST00000554971 MRPL47Q9HD33 250 aaKnown RBP18.18■□□□□ 0.5
SHOX-204ENST00000554971 ATP8A1Q9Y2Q0 1164 aa18.18■□□□□ 0.5
SHOX-204ENST00000554971 A8MXQ7 604 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 RARGP13631 454 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 PLTPP55058 493 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 GUCY1A3Q02108 690 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 GPR17Q13304 367 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 SIX1Q15475 284 aaPredicted RBP18.17■□□□□ 0.5
SHOX-204ENST00000554971 CTC1Q2NKJ3 1217 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 SLC39A12Q504Y0 691 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 ODF2Q5BJF6 829 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 DENND2CQ68D51 928 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 FAM171BQ6P995 826 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 CCDC105Q8IYK2 499 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 THEM5Q8N1Q8 247 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 GRK7Q8WTQ7 553 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 PGLYRP2Q96PD5 576 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 SYT15Q9BQS2 421 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 TRIM31Q9BZY9 425 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 ELOVL4Q9GZR5 314 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms