RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 Q6ZRM9 215 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 BRINP3Q76B58 766 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 SYT13Q7L8C5 426 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 RASGRP2Q7LDG7 609 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 TTC30AQ86WT1 665 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 OR4N4Q8N0Y3 316 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 METTL25Q8N6Q8 603 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 CCDC89Q8N998 374 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 ATG4AQ8WYN0 398 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 NACC2Q96BF6 587 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 KTI12Q96EK9 354 aaPredicted RBP4.37□□□□□ -1.71
TDP1-207ENST00000553617 MCRS1Q96EZ8 462 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 C7orf26Q96N11 449 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 HAPLN3Q96S86 360 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 SERINC2Q96SA4 455 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 CHCHD6Q9BRQ6 235 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 MECRQ9BV79 373 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 VN1R3Q9BXE9 311 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 TEX101Q9BY14 249 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 PAIP1Q9H074 479 aaKnown RBP4.37□□□□□ -1.71
TDP1-207ENST00000553617 BRD8Q9H0E9 1235 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 RXFP3Q9NSD7 469 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 CLIC5Q9NZA1 410 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 RNF181Q9P0P0 153 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 SERTAD3Q9UJW9 196 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 USP22Q9UPT9 525 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 SORCS3Q9UPU3 1222 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 ZBTB1Q9Y2K1 713 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 RRP7AQ9Y3A4 280 aaKnown RBP4.37□□□□□ -1.71
TDP1-207ENST00000553617 AFG3L2Q9Y4W6 797 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 VWA3AA6NCI4 1184 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 MYADML2A6NDP7 307 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 CAPN14A8MX76 684 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 GOLGA6L6A8MZA4 724 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 F5H697 171 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 K7ENM7 598 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 EXOC5O00471 708 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 TRIM24O15164 1050 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 CTIFO43310 598 aaKnown RBP4.36□□□□□ -1.71
TDP1-207ENST00000553617 TRIAP1O43715 76 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 NUAK1O60285 661 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 RPS6KA4O75676 772 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 TMEM63AO94886 807 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 WDR47O94967 919 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 ATXN1P54253 815 aaKnown RBP4.36□□□□□ -1.71
TDP1-207ENST00000553617 CASP6P55212 293 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 CXADRP78310 365 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 SP2Q02086 613 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 MYBPC2Q14324 1141 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 NFIXQ14938 502 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 RPS6KA2Q15349 733 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 FAM90A2PQ658T7 463 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 ANO7Q6IWH7 933 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 ACAD10Q6JQN1 1059 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 FOXR2Q6PJQ5 311 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 CLEC9AQ6UXN8 241 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 Q6ZSN1 163 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 GDF7Q7Z4P5 450 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 IZUMO1Q8IYV9 350 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 TMEM132CQ8N3T6 1108 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 TCP11L2Q8N4U5 519 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 SYT8Q8NBV8 401 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 OSCP1Q8WVF1 389 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 HMGB4Q8WW32 186 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 SNX19Q92543 992 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 ZUFSPQ96AP4 578 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 FAM136AQ96C01 138 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 TREX2Q9BQ50 279 aaPredicted RBP4.36□□□□□ -1.71
TDP1-207ENST00000553617 C17orf80Q9BSJ5 609 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 AMBRA1Q9C0C7 1298 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 PRDM13Q9H4Q3 707 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 KCNK9Q9NPC2 374 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 TRIM36Q9NQ86 728 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 OLA1Q9NTK5 396 aaKnown RBP4.36□□□□□ -1.71
TDP1-207ENST00000553617 LIN7CQ9NUP9 197 aaKnown RBP4.36□□□□□ -1.71
TDP1-207ENST00000553617 TMEM74BQ9NUR3 256 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 AASSQ9UDR5 926 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 TBX20Q9UMR3 447 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 RABGAP1Q9Y3P9 1069 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 XDHP47989 1333 aa4.36□□□□□ -1.71
TDP1-207ENST00000553617 A0A1W2PPH5 198 aa4.35□□□□□ -1.71
TDP1-207ENST00000553617 SAC3D1A6NKF1 404 aa4.35□□□□□ -1.71
TDP1-207ENST00000553617 DBX1A6NMT0 343 aa4.35□□□□□ -1.71
TDP1-207ENST00000553617 AHRRA9YTQ3 701 aa4.35□□□□□ -1.71
TDP1-207ENST00000553617 STX16-NPEPL1H3BU86 382 aa4.35□□□□□ -1.71
TDP1-207ENST00000553617 STX16O14662 325 aa4.35□□□□□ -1.71
TDP1-207ENST00000553617 GPR42O15529 346 aa4.35□□□□□ -1.71
TDP1-207ENST00000553617 ANP32CO43423 234 aa4.35□□□□□ -1.71
TDP1-207ENST00000553617 TSPAN3O60637 253 aa4.35□□□□□ -1.71
TDP1-207ENST00000553617 USO1O60763 962 aaKnown RBP4.35□□□□□ -1.71
TDP1-207ENST00000553617 ERN1O75460 977 aaKnown RBP4.35□□□□□ -1.71
TDP1-207ENST00000553617 CSF1P09603 554 aa4.35□□□□□ -1.71
TDP1-207ENST00000553617 PBX1P40424 430 aa4.35□□□□□ -1.71
TDP1-207ENST00000553617 RAP1GAPP47736 663 aa4.35□□□□□ -1.71
TDP1-207ENST00000553617 CCT4P50991 539 aaKnown RBP4.35□□□□□ -1.71
TDP1-207ENST00000553617 SCNN1GP51170 649 aa4.35□□□□□ -1.71
TDP1-207ENST00000553617 RBM5P52756 815 aaKnown RBP eCLIP4.35□□□□□ -1.71
TDP1-207ENST00000553617 DCTN1Q14203 1278 aa4.35□□□□□ -1.71
TDP1-207ENST00000553617 TOMM20Q15388 145 aa4.35□□□□□ -1.71
TDP1-207ENST00000553617 BAK1Q16611 211 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms