RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 SLCO1A2P46721 670 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 TTC3P53804 2025 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 RARS2Q5T160 578 aaKnown RBP8.52□□□□□ -1.05
CHPT1-208ENST00000552215 RAP1GAP2Q684P5 730 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 PSRC1Q6PGN9 363 aaPredicted RBP8.52□□□□□ -1.05
CHPT1-208ENST00000552215 CLEC20AQ6ZU45 233 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 GET4Q7L5D6 327 aaPredicted RBP8.52□□□□□ -1.05
CHPT1-208ENST00000552215 TMEM86AQ8N2M4 240 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 TTC39CQ8N584 583 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 TOP6BLQ8N6T0 577 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 WHAMMQ8TF30 809 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 KBTBD7Q8WVZ9 684 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 ALG3Q92685 438 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 CASD1Q96PB1 797 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 FERMT1Q9BQL6 677 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 MARCH2Q9P0N8 246 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 NFU1Q9UMS0 254 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 MRPS23Q9Y3D9 190 aaKnown RBP8.52□□□□□ -1.05
CHPT1-208ENST00000552215 ZDBF2Q9HCK1 2354 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 TCRBV7S2A1N4TA0A589 114 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 H3BQ06 376 aaPredicted RBP8.52□□□□□ -1.05
CHPT1-208ENST00000552215 EEF2KO00418 725 aaKnown RBP8.52□□□□□ -1.05
CHPT1-208ENST00000552215 MCF2LO15068 1137 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 FAM189A1O60320 539 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 ZNF623O75123 536 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 PIAS1O75925 651 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 GZMAP12544 262 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 RARGP13631 454 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 LAG3P18627 525 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 GBP1P32455 592 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 TRIM71Q2Q1W2 868 aaKnown RBP8.52□□□□□ -1.05
CHPT1-208ENST00000552215 LRRC31Q6UY01 552 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 CTAGE3PQ8IX95 158 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 COLGALT2Q8IYK4 626 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 ZNF710Q8N1W2 664 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 CARNMT1Q8N4J0 409 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 DNAAF3Q8N9W5 541 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 FAM71DQ8N9W8 422 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 SPATA18Q8TC71 538 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 SMOQ99835 787 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 PAIP2Q9BPZ3 127 aaKnown RBP8.52□□□□□ -1.05
CHPT1-208ENST00000552215 TMEM121Q9BTD3 319 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 TLR10Q9BXR5 811 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 CCSER2Q9H7U1 834 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 CLDND1Q9NY35 253 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 KLHL8Q9P2G9 620 aaPredicted RBP8.52□□□□□ -1.05
CHPT1-208ENST00000552215 UVRAGQ9P2Y5 699 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 FAM8A1Q9UBU6 413 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 AP4E1Q9UPM8 1137 aa8.52□□□□□ -1.05
CHPT1-208ENST00000552215 TEX28O15482 410 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 CYP3A5P20815 502 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 IRS1P35568 1242 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 GPD2P43304 727 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 RPL10AP62906 217 aaKnown RBP8.51□□□□□ -1.05
CHPT1-208ENST00000552215 STILQ15468 1287 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 TOP1MTQ969P6 601 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 ARMC5Q96C12 935 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 GRM6O15303 877 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 KCNN4O15554 427 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 GJB5O95377 273 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 ZSCAN5DPP0CG00 497 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 RARAP10276 462 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 GTF2F1P35269 517 aaKnown RBP eCLIP8.51□□□□□ -1.05
CHPT1-208ENST00000552215 PRKCIP41743 596 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 YWHAGP61981 247 aaKnown RBP eCLIP8.51□□□□□ -1.05
CHPT1-208ENST00000552215 MAPK8IP2Q13387 824 aaPredicted RBP8.51□□□□□ -1.05
CHPT1-208ENST00000552215 SEPT6Q14141 434 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 BBS9Q3SYG4 887 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 CFAP58Q5T655 872 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 KIAA0319Q5VV43 1072 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 PID1Q7Z2X4 250 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 UNC93AQ86WB7 457 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 ZNF677Q86XU0 584 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 IFNLR1Q8IU57 520 aaPredicted RBP8.51□□□□□ -1.05
CHPT1-208ENST00000552215 NUP93Q8N1F7 819 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 KREMEN2Q8NCW0 462 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 GANCQ8TET4 914 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 HDAC7Q8WUI4 952 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 RAD9AQ99638 391 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 EMILIN2Q9BXX0 1053 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 FAM107BQ9H098 131 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 MUC3BQ9H195 1237 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 VPS37BQ9H9H4 285 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 HCFC1R1Q9NWW0 138 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 ATP8A1Q9Y2Q0 1164 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 PLXNB2O15031 1838 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 PTPRFP10586 1907 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 PDE2AO00408 941 aaPredicted RBP8.51□□□□□ -1.05
CHPT1-208ENST00000552215 GAS8O95995 478 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 ADH1AP07327 375 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 ETS1P14921 441 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 MMP8P22894 467 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 HARS2P49590 506 aaKnown RBP8.51□□□□□ -1.05
CHPT1-208ENST00000552215 EIF3EP60228 445 aaKnown RBP8.51□□□□□ -1.05
CHPT1-208ENST00000552215 LCLAT1Q6UWP7 414 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 PDZD4Q76G19 769 aaPredicted RBP8.51□□□□□ -1.05
CHPT1-208ENST00000552215 SPATA4Q8NEY3 305 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 EXOC2Q96KP1 924 aa8.51□□□□□ -1.05
CHPT1-208ENST00000552215 NAP1L3Q99457 506 aaPredicted RBP8.51□□□□□ -1.05
CHPT1-208ENST00000552215 CIPCQ9C0C6 399 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms