RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 PLCL1Q15111 1095 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 KLF6Q99612 283 aaPredicted RBP12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 NFKBIZQ9BYH8 718 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 ARMC7Q9H6L4 198 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 CHST12Q9NRB3 414 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 SKAP2O75563 359 aaPredicted RBP12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 KLRC1P26715 233 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 RPL10AP62906 217 aaKnown RBP12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 ZNF284Q2VY69 593 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 SCUBE1Q8IWY4 988 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 ZNF786Q8N393 782 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 DPP10Q8N608 796 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 EPS8L3Q8TE67 593 aaKnown RBP12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 MRPS31Q92665 395 aaKnown RBP12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 LRRC40Q9H9A6 602 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 TLR8Q9NR97 1041 aaKnown RBP12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 STAU1O95793 577 aaKnown RBP12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 DLGAP3O95886 979 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 IFNA14P01570 189 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 UBTFL6P0CB48 400 aaPredicted RBP12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 PCNX4Q63HM2 1172 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 GJB7Q6PEY0 223 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 MIER2Q8N344 545 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 EXD1Q8NHP7 514 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 C19orf60Q96EN9 201 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 KLHL4Q9C0H6 718 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 VPS28Q9UK41 221 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 GLP2RO95838 553 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 GSTM1P09488 218 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 THRAP10827 490 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 ACADMP11310 421 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 MMP14P50281 582 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 APLFQ8IW19 511 aaPredicted RBP12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 TRIM8Q9BZR9 551 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 DCDC2CA8MYV0 355 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 CALB2P22676 271 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 HUNKP57058 714 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 MOXD1Q6UVY6 613 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 RAD9BQ6WBX8 426 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 FBXO36Q8NEA4 188 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 PDP2Q9P2J9 529 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 PHTF1Q9UMS5 762 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 SESN1Q9Y6P5 492 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 VWDEQ8N2E2 1590 aa12.88□□□□□ -0.35
RAB3IP-212ENST00000550536 NR5A2O00482 541 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 SREBF1P36956 1147 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 OXCT1P55809 520 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 PRAMEF18Q5VWM3 479 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 FAM172AQ8WUF8 416 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 GLMNQ92990 594 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 URODP06132 367 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 C4BPBP20851 252 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 SHROOM1Q2M3G4 852 aaPredicted RBP12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 PLA2G4CQ9UP65 541 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 PPP2R1BP30154 601 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 TMED10P49755 219 aaKnown RBP12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 SLC26A2P50443 739 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 BACE1P56817 501 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 RPS7P62081 194 aaKnown RBP12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 IRX1P78414 480 aaPredicted RBP12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 C1DQ13901 141 aaKnown RBP12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 PTGISQ16647 500 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 Q4G0T1 1027 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 MIB1Q86YT6 1006 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 WDR49Q8IV35 697 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 CASKIN2Q8WXE0 1202 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 ATG4CQ96DT6 458 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 PARP4Q9UKK3 1724 aaKnown RBP12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 F8VZ95 297 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 NTSR2O95665 410 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 VTNP04004 478 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 RBP1P09455 135 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 VDRP11473 427 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 HOMEZQ8IX15 550 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 NCKIPSDQ9NZQ3 722 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 SNX8Q9Y5X2 465 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 PBLDP30039 288 aaPredicted RBP12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 RFX3P48380 749 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 ST13P50502 369 aaKnown RBP12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 KDM7AQ6ZMT4 941 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 NT5DC4Q86YG4 428 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 KCTD14Q9BQ13 255 aaPredicted RBP12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 DDI1Q8WTU0 396 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 GZMAP12544 262 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 RAP1GAPP47736 663 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 CPA2P48052 419 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 DDX39BQ13838 428 aaKnown RBP12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 SMAD5Q99717 465 aaKnown RBP12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 FAM153AQ9UHL3 310 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 FOXN3O00409 490 aaPredicted RBP12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 NBNO60934 754 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 CYP11B2P19099 503 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 ITGA9Q13797 1035 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 SAMD3Q8N6K7 520 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 MTERF3Q96E29 417 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 CGRRF1Q99675 332 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 PCDHB12Q9Y5F1 795 aa12.87□□□□□ -0.35
RAB3IP-212ENST00000550536 SUPT20HL2P0C7V6 817 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms