RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 MYADMQ96S97 322 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 ISCUQ9H1K1 167 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 POPDC2Q9HBU9 364 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.32□□□□□ -0.44
SNHG1-221ENST00000544983 RRN3Q9NYV6 651 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 IGSF9Q9P2J2 1179 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 CDH22Q9UJ99 828 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 DNMT3LQ9UJW3 386 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 DOCK8Q8NF50 2099 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 YJEFN3A6XGL0 299 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 LOC730098B7Z3J9 87 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 E7ENQ6 273 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 NRDCO43847 1150 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 AKR1B10O60218 316 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 ERBB2P04626 1255 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 CKMP06732 381 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 RARGP13631 454 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 IL9P15248 144 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 EIF4A3P38919 411 aaKnown RBP12.31□□□□□ -0.44
SNHG1-221ENST00000544983 SLC7A9P82251 487 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 COG7P83436 770 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 CYP4F8P98187 520 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 GOLGA8FQ08AF8 430 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 GOLGA8DPQ0D2H9 430 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 ASTE1Q2TB18 679 aaPredicted RBP12.31□□□□□ -0.44
SNHG1-221ENST00000544983 TJAP1Q5JTD0 557 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 TXNDC8Q6A555 127 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 OR6B2Q6IFH4 312 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 ALKBH5Q6P6C2 394 aaKnown RBP12.31□□□□□ -0.44
SNHG1-221ENST00000544983 OLFML1Q6UWY5 402 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 RSRC2Q7L4I2 434 aaKnown RBP12.31□□□□□ -0.44
SNHG1-221ENST00000544983 BHLHA9Q7RTU4 235 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 XYLT1Q86Y38 959 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 MCOLN2Q8IZK6 566 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 CELF5Q8N6W0 485 aaKnown RBP12.31□□□□□ -0.44
SNHG1-221ENST00000544983 MAB21L3Q8N8X9 362 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 ZSCAN18Q8TBC5 510 aaPredicted RBP12.31□□□□□ -0.44
SNHG1-221ENST00000544983 FEZF2Q8TBJ5 459 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 ING5Q8WYH8 240 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 FAM149B1Q96BN6 582 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 MCRS1Q96EZ8 462 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 SLC46A2Q9BY10 475 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 NACA2Q9H009 215 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 NHEJ1Q9H9Q4 299 aaPredicted RBP12.31□□□□□ -0.44
SNHG1-221ENST00000544983 ZFP14Q9HCL3 533 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 TRPC7Q9HCX4 862 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 LUC7LQ9NQ29 371 aaKnown RBP12.31□□□□□ -0.44
SNHG1-221ENST00000544983 TDP1Q9NUW8 608 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 ARHGAP26Q9UNA1 814 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 ANAPC1Q9H1A4 1944 aa12.31□□□□□ -0.44
SNHG1-221ENST00000544983 A0A087X0T9 212 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 ANKRD62A6NC57 917 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 C2orf78A6NCI8 922 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 ANHXE9PGG2 379 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 DPYSL4O14531 572 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 CAPN9O14815 690 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 COCHO43405 550 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 ECI2O75521 394 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 IPO7O95373 1038 aaKnown RBP12.3□□□□□ -0.44
SNHG1-221ENST00000544983 FTLP02792 175 aaPredicted RBP12.3□□□□□ -0.44
SNHG1-221ENST00000544983 FAM228BP0C875 321 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 GJA1P17302 382 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 CYLC1P35663 651 aaPredicted RBP12.3□□□□□ -0.44
SNHG1-221ENST00000544983 KCNQ1P51787 676 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 ZP2Q05996 745 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 PTP4A2Q12974 167 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 MTA1Q13330 715 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 NNTQ13423 1086 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 FAM78AQ5JUQ0 283 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 C10orf120Q5SQS8 335 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 FAM102AQ5T9C2 384 aaPredicted RBP12.3□□□□□ -0.44
SNHG1-221ENST00000544983 MSANTD2Q6P1R3 559 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 MMS22LQ6ZRQ5 1243 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 FAM183BPQ6ZVS7 135 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 GPIHBP1Q8IV16 184 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 ARID3BQ8IVW6 561 aaPredicted RBP12.3□□□□□ -0.44
SNHG1-221ENST00000544983 SPC24Q8NBT2 197 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 C3orf20Q8ND61 904 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 CCDC112Q8NEF3 446 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 OLIG1Q8TAK6 271 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 ELSPBP1Q96BH3 223 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 RPGRIP1Q96KN7 1286 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 C11orf70Q9BRQ4 267 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 NMUR1Q9HB89 426 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 MRPL47Q9HD33 250 aaKnown RBP12.3□□□□□ -0.44
SNHG1-221ENST00000544983 PARVAQ9NVD7 372 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 SCINQ9Y6U3 715 aa12.3□□□□□ -0.44
SNHG1-221ENST00000544983 OBSL1O75147 1896 aa12.29□□□□□ -0.44
SNHG1-221ENST00000544983 MYO16Q9Y6X6 1858 aa12.29□□□□□ -0.44
SNHG1-221ENST00000544983 C19orf67A6NJJ6 358 aa12.29□□□□□ -0.44
SNHG1-221ENST00000544983 SIGLEC16A6NMB1 481 aa12.29□□□□□ -0.44
SNHG1-221ENST00000544983 C2CD4DB7Z1M9 353 aa12.29□□□□□ -0.44
SNHG1-221ENST00000544983 PIK3R2O00459 728 aa12.29□□□□□ -0.44
SNHG1-221ENST00000544983 PLEKP08567 350 aaPredicted RBP12.29□□□□□ -0.44
SNHG1-221ENST00000544983 NCAM1P13591 858 aa12.29□□□□□ -0.44
SNHG1-221ENST00000544983 DESP17661 470 aa12.29□□□□□ -0.44
SNHG1-221ENST00000544983 NOS2P35228 1153 aa12.29□□□□□ -0.44
SNHG1-221ENST00000544983 MATKP42679 507 aa12.29□□□□□ -0.44
SNHG1-221ENST00000544983 CCDC122Q5T0U0 273 aa12.29□□□□□ -0.44
SNHG1-221ENST00000544983 STXBP5Q5T5C0 1151 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms