RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 EEF1GP26641 437 aaKnown RBP12.01□□□□□ -0.49
YBX3-216ENST00000544622 OPRD1P41143 372 aa12.01□□□□□ -0.49
YBX3-216ENST00000544622 MTIF2P46199 727 aaKnown RBP12.01□□□□□ -0.49
YBX3-216ENST00000544622 TKTL1P51854 596 aa12.01□□□□□ -0.49
YBX3-216ENST00000544622 MFAP3P55082 362 aa12.01□□□□□ -0.49
YBX3-216ENST00000544622 DHCR24Q15392 516 aa12.01□□□□□ -0.49
YBX3-216ENST00000544622 TPD52L1Q16890 204 aaPredicted RBP12.01□□□□□ -0.49
YBX3-216ENST00000544622 PMF1Q6P1K2 205 aa12.01□□□□□ -0.49
YBX3-216ENST00000544622 SPEM1Q8N4L4 309 aa12.01□□□□□ -0.49
YBX3-216ENST00000544622 SHC3Q92529 594 aa12.01□□□□□ -0.49
YBX3-216ENST00000544622 HSFY1Q96LI6 401 aa12.01□□□□□ -0.49
YBX3-216ENST00000544622 SPATA6Q9NWH7 488 aaPredicted RBP12.01□□□□□ -0.49
YBX3-216ENST00000544622 TMEM63CQ9P1W3 806 aa12.01□□□□□ -0.49
YBX3-216ENST00000544622 TBC1D14Q9P2M4 693 aa12.01□□□□□ -0.49
YBX3-216ENST00000544622 NUDT5Q9UKK9 219 aa12.01□□□□□ -0.49
YBX3-216ENST00000544622 NFE2L3Q9Y4A8 694 aa12.01□□□□□ -0.49
YBX3-216ENST00000544622 DNAH14Q0VDD8 3507 aa12.01□□□□□ -0.49
YBX3-216ENST00000544622 MYH10P35580 1976 aa12□□□□□ -0.49
YBX3-216ENST00000544622 KCNJ18B7U540 433 aa12□□□□□ -0.49
YBX3-216ENST00000544622 LAMTOR5O43504 91 aa12□□□□□ -0.49
YBX3-216ENST00000544622 CYP17A1P05093 508 aa12□□□□□ -0.49
YBX3-216ENST00000544622 DRD1P21728 446 aa12□□□□□ -0.49
YBX3-216ENST00000544622 BRD2P25440 801 aaKnown RBP12□□□□□ -0.49
YBX3-216ENST00000544622 NR1H3Q13133 447 aa12□□□□□ -0.49
YBX3-216ENST00000544622 LRRC32Q14392 662 aa12□□□□□ -0.49
YBX3-216ENST00000544622 KCNJ12Q14500 433 aa12□□□□□ -0.49
YBX3-216ENST00000544622 HSP90AA4PQ58FG1 418 aa12□□□□□ -0.49
YBX3-216ENST00000544622 CCDC183Q5T5S1 534 aa12□□□□□ -0.49
YBX3-216ENST00000544622 Q6ZNB5 142 aa12□□□□□ -0.49
YBX3-216ENST00000544622 Q6ZS52 159 aa12□□□□□ -0.49
YBX3-216ENST00000544622 BBS7Q8IWZ6 715 aa12□□□□□ -0.49
YBX3-216ENST00000544622 ARHGAP18Q8N392 663 aa12□□□□□ -0.49
YBX3-216ENST00000544622 ZBTB44Q8NCP5 570 aa12□□□□□ -0.49
YBX3-216ENST00000544622 TTC16Q8NEE8 873 aa12□□□□□ -0.49
YBX3-216ENST00000544622 STK32AQ8WU08 396 aa12□□□□□ -0.49
YBX3-216ENST00000544622 ZNF606Q8WXB4 792 aa12□□□□□ -0.49
YBX3-216ENST00000544622 NDRG1Q92597 394 aaKnown RBP12□□□□□ -0.49
YBX3-216ENST00000544622 SECISBP2LQ93073 1101 aaKnown RBP12□□□□□ -0.49
YBX3-216ENST00000544622 CDK5RAP1Q96SZ6 601 aaKnown RBP12□□□□□ -0.49
YBX3-216ENST00000544622 P2RY13Q9BPV8 354 aa12□□□□□ -0.49
YBX3-216ENST00000544622 ULBP1Q9BZM6 244 aa12□□□□□ -0.49
YBX3-216ENST00000544622 HSD3B7Q9H2F3 369 aa12□□□□□ -0.49
YBX3-216ENST00000544622 ACP6Q9NPH0 428 aa12□□□□□ -0.49
YBX3-216ENST00000544622 CNGB3Q9NQW8 809 aa12□□□□□ -0.49
YBX3-216ENST00000544622 C2orf42Q9NWW7 574 aa12□□□□□ -0.49
YBX3-216ENST00000544622 DNMT3LQ9UJW3 386 aa12□□□□□ -0.49
YBX3-216ENST00000544622 NAGPAQ9UK23 515 aa12□□□□□ -0.49
YBX3-216ENST00000544622 AJAP1Q9UKB5 411 aaPredicted RBP12□□□□□ -0.49
YBX3-216ENST00000544622 CFAP54Q96N23 3096 aa12□□□□□ -0.49
YBX3-216ENST00000544622 YJEFN3A6XGL0 299 aa11.99□□□□□ -0.49
YBX3-216ENST00000544622 CHURC1-FNTBB4DL54 471 aa11.99□□□□□ -0.49
YBX3-216ENST00000544622 E7ENQ6 273 aa11.99□□□□□ -0.49
YBX3-216ENST00000544622 K7ESF4 209 aa11.99□□□□□ -0.49
YBX3-216ENST00000544622 SCAMP3O14828 347 aaKnown RBP11.99□□□□□ -0.49
YBX3-216ENST00000544622 MDM4O15151 490 aa11.99□□□□□ -0.49
YBX3-216ENST00000544622 EGFP01133 1207 aa11.99□□□□□ -0.49
YBX3-216ENST00000544622 CHRM1P11229 460 aaPredicted RBP11.99□□□□□ -0.49
YBX3-216ENST00000544622 RALAP11233 206 aa11.99□□□□□ -0.49
YBX3-216ENST00000544622 CLCN1P35523 988 aa11.99□□□□□ -0.49
YBX3-216ENST00000544622 EIF2DP41214 584 aaKnown RBP11.99□□□□□ -0.49
YBX3-216ENST00000544622 MRE11P49959 708 aa11.99□□□□□ -0.49
YBX3-216ENST00000544622 CCR3P51677 355 aa11.99□□□□□ -0.49
YBX3-216ENST00000544622 DAOAP59103 153 aa11.99□□□□□ -0.49
YBX3-216ENST00000544622 YWHAGP61981 247 aaKnown RBP eCLIP11.99□□□□□ -0.49
YBX3-216ENST00000544622 GRSF1Q12849 480 aaKnown RBP eCLIP11.99□□□□□ -0.49
YBX3-216ENST00000544622 NCAPHQ15003 741 aa11.99□□□□□ -0.49
YBX3-216ENST00000544622 SASS6Q6UVJ0 657 aa11.99□□□□□ -0.49
YBX3-216ENST00000544622 C11orf57Q6ZUT1 292 aaPredicted RBP11.99□□□□□ -0.49
YBX3-216ENST00000544622 TADA2BQ86TJ2 420 aa11.99□□□□□ -0.49
YBX3-216ENST00000544622 CD101Q93033 1021 aa11.99□□□□□ -0.49
YBX3-216ENST00000544622 NAA15Q9BXJ9 866 aaKnown RBP11.99□□□□□ -0.49
YBX3-216ENST00000544622 LRRC4Q9HBW1 653 aa11.99□□□□□ -0.49
YBX3-216ENST00000544622 ANO10Q9NW15 660 aa11.99□□□□□ -0.49
YBX3-216ENST00000544622 FANCLQ9NW38 375 aa11.99□□□□□ -0.49
YBX3-216ENST00000544622 SH3BP1Q9Y3L3 701 aa11.99□□□□□ -0.49
YBX3-216ENST00000544622 K7EQS6 105 aa11.98□□□□□ -0.49
YBX3-216ENST00000544622 M0QYV0 167 aa11.98□□□□□ -0.49
YBX3-216ENST00000544622 FOXN3O00409 490 aaPredicted RBP11.98□□□□□ -0.49
YBX3-216ENST00000544622 HOXC11O43248 304 aaPredicted RBP11.98□□□□□ -0.49
YBX3-216ENST00000544622 LILRB5O75023 590 aa11.98□□□□□ -0.49
YBX3-216ENST00000544622 STC2O76061 302 aa11.98□□□□□ -0.49
YBX3-216ENST00000544622 KLKB1P03952 638 aa11.98□□□□□ -0.49
YBX3-216ENST00000544622 FYNP06241 537 aa11.98□□□□□ -0.49
YBX3-216ENST00000544622 ZNF18P17022 549 aa11.98□□□□□ -0.49
YBX3-216ENST00000544622 HOXA6P31267 233 aa11.98□□□□□ -0.49
YBX3-216ENST00000544622 CXCL12P48061 93 aa11.98□□□□□ -0.49
YBX3-216ENST00000544622 COG7P83436 770 aa11.98□□□□□ -0.49
YBX3-216ENST00000544622 SATB1Q01826 763 aa11.98□□□□□ -0.49
YBX3-216ENST00000544622 CSTF1Q05048 431 aaKnown RBP11.98□□□□□ -0.49
YBX3-216ENST00000544622 ADIGQ0VDE8 80 aa11.98□□□□□ -0.49
YBX3-216ENST00000544622 MESP2Q0VG99 397 aa11.98□□□□□ -0.49
YBX3-216ENST00000544622 FBXO43Q4G163 708 aa11.98□□□□□ -0.49
YBX3-216ENST00000544622 C10orf120Q5SQS8 335 aa11.98□□□□□ -0.49
YBX3-216ENST00000544622 LY6G5CQ5SRR4 150 aa11.98□□□□□ -0.49
YBX3-216ENST00000544622 KLHDC7AQ5VTJ3 777 aa11.98□□□□□ -0.49
YBX3-216ENST00000544622 BSPRYQ5W0U4 402 aa11.98□□□□□ -0.49
YBX3-216ENST00000544622 PKN3Q6P5Z2 889 aa11.98□□□□□ -0.49
YBX3-216ENST00000544622 TSSK4Q6SA08 328 aa11.98□□□□□ -0.49
YBX3-216ENST00000544622 APTXQ7Z2E3 356 aaKnown RBP11.98□□□□□ -0.49
YBX3-216ENST00000544622 TMEM110Q86TL2 294 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms