RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 FOXB1Q99853 325 aa6.82□□□□□ -1.32
CPSF7-222ENST00000544585 RTP3Q9BQQ7 232 aa6.82□□□□□ -1.32
CPSF7-222ENST00000544585 PLCD4Q9BRC7 762 aa6.82□□□□□ -1.32
CPSF7-222ENST00000544585 HERPUD2Q9BSE4 406 aa6.82□□□□□ -1.32
CPSF7-222ENST00000544585 UBAC1Q9BSL1 405 aa6.82□□□□□ -1.32
CPSF7-222ENST00000544585 SELENOOQ9BVL4 669 aa6.82□□□□□ -1.32
CPSF7-222ENST00000544585 ADAM7Q9H2U9 754 aa6.82□□□□□ -1.32
CPSF7-222ENST00000544585 RIOX1Q9H6W3 641 aa6.82□□□□□ -1.32
CPSF7-222ENST00000544585 AGO3Q9H9G7 860 aaKnown RBP6.82□□□□□ -1.32
CPSF7-222ENST00000544585 ARHGAP28Q9P2N2 729 aa6.82□□□□□ -1.32
CPSF7-222ENST00000544585 PRSS50Q9UI38 385 aa6.82□□□□□ -1.32
CPSF7-222ENST00000544585 TUBE1Q9UJT0 475 aa6.82□□□□□ -1.32
CPSF7-222ENST00000544585 TMPRSS11EQ9UL52 423 aa6.82□□□□□ -1.32
CPSF7-222ENST00000544585 L1RE1Q9UN81 338 aa6.82□□□□□ -1.32
CPSF7-222ENST00000544585 KAT6AQ92794 2004 aa6.82□□□□□ -1.32
CPSF7-222ENST00000544585 ATRXP46100 2492 aa6.82□□□□□ -1.32
CPSF7-222ENST00000544585 MYO10Q9HD67 2058 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 RALGAPA2Q2PPJ7 1873 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 KDM3AQ9Y4C1 1321 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 WDFY4Q6ZS81 3184 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 A0A0D9SFI3 127 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 GSTTP1A0A1W2PQM5 241 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 FITM1A5D6W6 292 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 CAPN8A6NHC0 703 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 PCDH8O95206 1070 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 PDGFBP01127 241 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-222ENST00000544585 ALDH2P05091 517 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 INSRRP14616 1297 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 FAHP16930 419 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 AOAHP28039 575 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 HTR1BP28222 390 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 PEX2P28328 305 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 ARL4AP40617 200 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 MTHFRP42898 656 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 HK2P52789 917 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 PDE1AP54750 535 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 POU5F1BQ06416 359 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 MALLQ13021 153 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 TRIM25Q14258 630 aaKnown RBP6.81□□□□□ -1.32
CPSF7-222ENST00000544585 SLC9A5Q14940 896 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 KRT72Q14CN4 511 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 IMMTQ16891 758 aaKnown RBP6.81□□□□□ -1.32
CPSF7-222ENST00000544585 ANO6Q4KMQ2 910 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 MARCH8Q5T0T0 291 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 ANKRD45Q5TZF3 282 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 SYCE2Q6PIF2 218 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 SLC24A5Q71RS6 500 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 FRMD5Q7Z6J6 570 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 DAAM2Q86T65 1068 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 ZDHHC13Q8IUH4 622 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 TBC1D10CQ8IV04 446 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 SMAP1Q8IYB5 467 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-222ENST00000544585 ZDHHC14Q8IZN3 488 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 PAF1Q8N7H5 531 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 TMEM105Q8N8V8 129 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 CALML6Q8TD86 181 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 OTUD7AQ8TE49 926 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-222ENST00000544585 MRPS27Q92552 414 aaKnown RBP6.81□□□□□ -1.32
CPSF7-222ENST00000544585 BORCS6Q96GS4 357 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 CCDC120Q96HB5 630 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 PIGSQ96S52 555 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 TBCBQ99426 244 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 APOL5Q9BWW9 433 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-222ENST00000544585 NUP62CLQ9H1M0 184 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 BHMT2Q9H2M3 363 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 AZI2Q9H6S1 392 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 ELAC1Q9H777 363 aaKnown RBP6.81□□□□□ -1.32
CPSF7-222ENST00000544585 TPSG1Q9NRR2 321 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 RGS18Q9NS28 235 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 UCKL1Q9NWZ5 548 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 MAD2L2Q9UI95 211 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 LIMCH1Q9UPQ0 1083 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 TRPV2Q9Y5S1 764 aa6.81□□□□□ -1.32
CPSF7-222ENST00000544585 NEDD4P46934 1319 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 IGSF9BQ9UPX0 1349 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 SMIM35A0A1B0GVV1 85 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 DENND3A2RUS2 1198 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 TBKBP1A7MCY6 615 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 HTRA2O43464 458 aaPredicted RBP6.8□□□□□ -1.32
CPSF7-222ENST00000544585 MGEA5O60502 916 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 RPS6KA5O75582 802 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 LAG3P18627 525 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 CD96P40200 585 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 HALP42357 657 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 IL12RB1P42701 662 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 FAM189BP81408 668 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 SP4Q02446 784 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 BTKQ06187 659 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 DBPQ10586 325 aaPredicted RBP6.8□□□□□ -1.32
CPSF7-222ENST00000544585 PUM1Q14671 1186 aaKnown RBP eCLIP6.8□□□□□ -1.32
CPSF7-222ENST00000544585 CCDC157Q569K6 752 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 ZFYVE27Q5T4F4 411 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 C20orf194Q5TEA3 1177 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 KLHDC10Q6PID8 442 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 PLPPR4Q7Z2D5 763 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 KANSL1Q7Z3B3 1105 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 DGLUCYQ7Z3D6 616 aa6.8□□□□□ -1.32
CPSF7-222ENST00000544585 ZNF589Q86UQ0 364 aaPredicted RBP6.8□□□□□ -1.32
CPSF7-222ENST00000544585 COLGALT1Q8NBJ5 622 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms