RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, human

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB3-210	ENST00000542817	RFC1	P35251	1148 aa	Predicted RBP	11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	FLT3	P36888	993 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	YWHAG	P61981	247 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	RPL7A	P62424	266 aa	Known RBP	11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ZNF252P-AS1	Q0IIN9	211 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	TEAD2	Q15562	447 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	RAB6C	Q53S08	254 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	SYPL2	Q5VXT5	272 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	OR6B2	Q6IFH4	312 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	EP400NL	Q6ZTU2	488 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	PDZD4	Q76G19	769 aa	Predicted RBP	11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	BEND5	Q7L4P6	421 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ARC	Q7LC44	396 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ZDHHC17	Q8IUH5	632 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	NPAS3	Q8IXF0	933 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	SIX6OS1	Q8N1H7	587 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ELMOD1	Q8N336	334 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	C3orf20	Q8ND61	904 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ADAMTS19	Q8TE59	1207 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	NT5C3B	Q969T7	300 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	NOX5	Q96PH1	765 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	MYADM	Q96S97	322 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	CYP2S1	Q96SQ9	504 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	DESI2	Q9BSY9	194 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	LACRT	Q9GZZ8	138 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	RAB6C	Q9H0N0	254 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	CLIC5	Q9NZA1	410 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	UXT	Q9UBK9	157 aa	Predicted RBP	11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	NUDT5	Q9UKK9	219 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	COG5	Q9UP83	839 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	NAALADL1	Q9UQQ1	740 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	PCDHA13	Q9Y5I0	950 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ADGRG1	Q9Y653	693 aa		11.19	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ANKRD62	A6NC57	917 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	C2CD4B	A6NLJ0	364 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	SIGLEC16	A6NMB1	481 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	GOLGA8S	H3BPF8	625 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	MDM4	O15151	490 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	COCH	O43405	550 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	GREM1	O60565	184 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	LTF	P02788	710 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	CALB1	P05937	261 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	GLI1	P08151	1106 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	TMEM253	P0C7T8	217 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ABCB4	P21439	1286 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	FSHR	P23945	695 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	FCAR	P24071	287 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	TUB	P50607	506 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	SMAD4	Q13485	552 aa	Known RBP	11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	CBX2	Q14781	532 aa	Predicted RBP	11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	TCEAL1	Q15170	157 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ATAT1	Q5SQI0	421 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	MSANTD2	Q6P1R3	559 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ELMSAN1	Q6PJG2	1045 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	VPS36	Q86VN1	386 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	DEFB106A	Q8N104	65 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ARFGAP1	Q8N6T3	406 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	EMC1	Q8N766	993 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	LEMD2	Q8NC56	503 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	PDZD8	Q8NEN9	1154 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ING5	Q8WYH8	240 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	EDEM1	Q92611	657 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	FGF13	Q92913	245 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	WBP2	Q969T9	261 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	RSPRY1	Q96DX4	576 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	LRRC3B	Q96PB8	259 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	SLITRK1	Q96PX8	696 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ATXN3L	Q9H3M9	355 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	DEF6	Q9H4E7	631 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	PIDD1	Q9HB75	910 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	TRPM5	Q9NZQ8	1165 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	MRPS23	Q9Y3D9	190 aa	Known RBP	11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	MYO16	Q9Y6X6	1858 aa		11.18	□□□□□ -0.62
NPIPB3-210	ENST00000542817	TTC28	Q96AY4	2481 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	TMEM191C	A6NGB0	347 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817		I6L893	689 aa	Predicted RBP	11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	PJA2	O43164	708 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ARHGAP6	O43182	974 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	TLR5	O60602	858 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	PRAMEF12	O95522	483 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	H2AFZ	P0C0S5	128 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	RARG	P13631	454 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	WEE1	P30291	646 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	CDC25C	P30307	473 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ARHGAP25	P42331	645 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	MTHFR	P42898	656 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	PPP3CC	P48454	512 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	YWHAZ	P63104	245 aa	Known RBP	11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	SKIV2L	Q15477	1246 aa	Known RBP	11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	SMAD2	Q15796	467 aa	Known RBP	11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	CCDC14	Q49A88	953 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	EFHC1	Q5JVL4	640 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	ARTN	Q5T4W7	220 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	FAM102A	Q5T9C2	384 aa	Predicted RBP	11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	SH3PXD2A	Q5TCZ1	1133 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	CES5A	Q6NT32	575 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	PPP1R2P3	Q6NXS1	205 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	KLHDC10	Q6PID8	442 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	H2AFV	Q71UI9	128 aa		11.17	□□□□□ -0.62
NPIPB3-210	ENST00000542817	CPNE8	Q86YQ8	564 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms