RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 C10orf82Q8WW14 230 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 EIF2AK1Q9BQI3 630 aaKnown RBP9.01□□□□□ -0.97
DDB1-217ENST00000540166 TEKT3Q9BXF9 490 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 APEX2Q9UBZ4 518 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 MARCOQ9UEW3 520 aaPredicted RBP9.01□□□□□ -0.97
DDB1-217ENST00000540166 NEU2Q9Y3R4 380 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 IGKV6D-41A0A0C4DH26 115 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 FOXN3O00409 490 aaPredicted RBP9.01□□□□□ -0.97
DDB1-217ENST00000540166 ATMINO43313 823 aaPredicted RBP9.01□□□□□ -0.97
DDB1-217ENST00000540166 TNFAIP8O95379 198 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 RPLP2P05387 115 aaKnown RBP9.01□□□□□ -0.97
DDB1-217ENST00000540166 ADRA1DP25100 572 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 DNAJB2P25686 324 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 PTGIRP43119 386 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 TMEM62Q0P6H9 643 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 PDIA2Q13087 525 aaKnown RBP9.01□□□□□ -0.97
DDB1-217ENST00000540166 BTG3Q14201 252 aaPredicted RBP9.01□□□□□ -0.97
DDB1-217ENST00000540166 LPIN1Q14693 890 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 ACAP1Q15027 740 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 LRRC8DQ7L1W4 858 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 DHDDSQ86SQ9 333 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 MAFAQ8NHW3 353 aaPredicted RBP9.01□□□□□ -0.97
DDB1-217ENST00000540166 NRG4Q8WWG1 115 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 PRDM12Q9H4Q4 367 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 ZNF576Q9H609 170 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 SETD4Q9NVD3 440 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 DOLKQ9UPQ8 538 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 STXBP5LQ9Y2K9 1186 aa9.01□□□□□ -0.97
DDB1-217ENST00000540166 HBS1LQ9Y450 684 aaKnown RBP9.01□□□□□ -0.97
DDB1-217ENST00000540166 C15orf38-AP3S2A0A0A6YYH1 394 aa9□□□□□ -0.97
DDB1-217ENST00000540166 GOLGA8SH3BPF8 625 aa9□□□□□ -0.97
DDB1-217ENST00000540166 GOLGA8MH3BSY2 632 aa9□□□□□ -0.97
DDB1-217ENST00000540166 MAFGO15525 162 aa9□□□□□ -0.97
DDB1-217ENST00000540166 TRMUO75648 421 aaKnown RBP9□□□□□ -0.97
DDB1-217ENST00000540166 OCM2P0CE71 109 aa9□□□□□ -0.97
DDB1-217ENST00000540166 OCMP0CE72 109 aaPredicted RBP9□□□□□ -0.97
DDB1-217ENST00000540166 PMLP29590 882 aa9□□□□□ -0.97
DDB1-217ENST00000540166 MARCKSL1P49006 195 aa9□□□□□ -0.97
DDB1-217ENST00000540166 CAP1Q01518 475 aa9□□□□□ -0.97
DDB1-217ENST00000540166 TRPC3Q13507 836 aa9□□□□□ -0.97
DDB1-217ENST00000540166 ANKRD20A4Q4UJ75 823 aa9□□□□□ -0.97
DDB1-217ENST00000540166 TTC27Q6P3X3 843 aa9□□□□□ -0.97
DDB1-217ENST00000540166 METTL7BQ6UX53 244 aa9□□□□□ -0.97
DDB1-217ENST00000540166 RINLQ6ZS11 566 aa9□□□□□ -0.97
DDB1-217ENST00000540166 ARPINQ7Z6K5 226 aa9□□□□□ -0.97
DDB1-217ENST00000540166 MYLIPQ8WY64 445 aa9□□□□□ -0.97
DDB1-217ENST00000540166 ALKBH8Q96BT7 664 aaKnown RBP9□□□□□ -0.97
DDB1-217ENST00000540166 HSPBAP1Q96EW2 488 aa9□□□□□ -0.97
DDB1-217ENST00000540166 OXNAD1Q96HP4 312 aaPredicted RBP9□□□□□ -0.97
DDB1-217ENST00000540166 PWWP2AQ96N64 755 aa9□□□□□ -0.97
DDB1-217ENST00000540166 HAPLN3Q96S86 360 aa9□□□□□ -0.97
DDB1-217ENST00000540166 RUSC1Q9BVN2 902 aa9□□□□□ -0.97
DDB1-217ENST00000540166 OLFML3Q9NRN5 406 aa9□□□□□ -0.97
DDB1-217ENST00000540166 EURLQ9NYK6 297 aa9□□□□□ -0.97
DDB1-217ENST00000540166 ANAPC7Q9UJX3 599 aa9□□□□□ -0.97
DDB1-217ENST00000540166 EMSYQ7Z589 1322 aa9□□□□□ -0.97
DDB1-217ENST00000540166 IQANK1A0A1B0GTG1 560 aa9□□□□□ -0.97
DDB1-217ENST00000540166 ANKRD63C9JTQ0 380 aa9□□□□□ -0.97
DDB1-217ENST00000540166 IPO5O00410 1097 aaKnown RBP9□□□□□ -0.97
DDB1-217ENST00000540166 TRAFD1O14545 582 aaPredicted RBP9□□□□□ -0.97
DDB1-217ENST00000540166 COPEO14579 308 aa9□□□□□ -0.97
DDB1-217ENST00000540166 GIPC1O14908 333 aa9□□□□□ -0.97
DDB1-217ENST00000540166 SLC16A3O15427 465 aaKnown RBP9□□□□□ -0.97
DDB1-217ENST00000540166 PSMC1P62191 440 aaKnown RBP9□□□□□ -0.97
DDB1-217ENST00000540166 POU5F1Q01860 360 aaKnown RBP9□□□□□ -0.97
DDB1-217ENST00000540166 ADRM1Q16186 407 aa9□□□□□ -0.97
DDB1-217ENST00000540166 INAQ16352 499 aa9□□□□□ -0.97
DDB1-217ENST00000540166 LPCAT4Q643R3 524 aa9□□□□□ -0.97
DDB1-217ENST00000540166 ELMSAN1Q6PJG2 1045 aa9□□□□□ -0.97
DDB1-217ENST00000540166 LPCAT2Q7L5N7 544 aa9□□□□□ -0.97
DDB1-217ENST00000540166 TRABD2AQ86V40 505 aa9□□□□□ -0.97
DDB1-217ENST00000540166 RFWD2Q8NHY2 731 aa9□□□□□ -0.97
DDB1-217ENST00000540166 FAM167AQ96KS9 214 aa9□□□□□ -0.97
DDB1-217ENST00000540166 FAM20AQ96MK3 541 aa9□□□□□ -0.97
DDB1-217ENST00000540166 ACAP3Q96P50 834 aa9□□□□□ -0.97
DDB1-217ENST00000540166 FAM118BQ9BPY3 351 aa9□□□□□ -0.97
DDB1-217ENST00000540166 PAIP1Q9H074 479 aaKnown RBP9□□□□□ -0.97
DDB1-217ENST00000540166 PLGRKTQ9HBL7 147 aa9□□□□□ -0.97
DDB1-217ENST00000540166 RRN3Q9NYV6 651 aa9□□□□□ -0.97
DDB1-217ENST00000540166 UBAP1Q9NZ09 502 aa9□□□□□ -0.97
DDB1-217ENST00000540166 SELENONQ9NZV5 590 aa9□□□□□ -0.97
DDB1-217ENST00000540166 TAGLN3Q9UI15 199 aa9□□□□□ -0.97
DDB1-217ENST00000540166 DMTF1Q9Y222 760 aa9□□□□□ -0.97
DDB1-217ENST00000540166 AK5Q9Y6K8 562 aa9□□□□□ -0.97
DDB1-217ENST00000540166 GOLGA8IPA6NC78 632 aa9□□□□□ -0.97
DDB1-217ENST00000540166 GOLGA8JA6NMD2 632 aa9□□□□□ -0.97
DDB1-217ENST00000540166 BOLA2-SMG1P6H3BVE0 249 aa9□□□□□ -0.97
DDB1-217ENST00000540166 RNASEH1O60930 286 aaKnown RBP9□□□□□ -0.97
DDB1-217ENST00000540166 SRGAP2CP0DJJ0 459 aa9□□□□□ -0.97
DDB1-217ENST00000540166 SRGAP2BP0DMP2 458 aa9□□□□□ -0.97
DDB1-217ENST00000540166 TCF7P36402 384 aaPredicted RBP9□□□□□ -0.97
DDB1-217ENST00000540166 NUP107P57740 925 aa9□□□□□ -0.97
DDB1-217ENST00000540166 BFSP1Q12934 665 aa9□□□□□ -0.97
DDB1-217ENST00000540166 AP3B2Q13367 1082 aa9□□□□□ -0.97
DDB1-217ENST00000540166 TAF2Q6P1X5 1199 aa9□□□□□ -0.97
DDB1-217ENST00000540166 ANKMY2Q8IV38 441 aa9□□□□□ -0.97
DDB1-217ENST00000540166 ARID3BQ8IVW6 561 aaPredicted RBP9□□□□□ -0.97
DDB1-217ENST00000540166 WDR75Q8IWA0 830 aaKnown RBP9□□□□□ -0.97
DDB1-217ENST00000540166 ULK2Q8IYT8 1036 aa9□□□□□ -0.97
DDB1-217ENST00000540166 GALNT4Q8N4A0 578 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms