RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 FAM237AA0A1B0GTK4 181 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 TCRBV21S2A2A0A5A6 115 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 LNP1A1A4G5 178 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 CDX4O14627 284 aaPredicted RBP8.93□□□□□ -0.98
USP28-203ENST00000537490 GIPC1O14908 333 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 KHNYNO15037 678 aaKnown RBP8.93□□□□□ -0.98
USP28-203ENST00000537490 MDM4O15151 490 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 MAPK13O15264 365 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 RHOBTB3O94955 611 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 MYL1P05976 194 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 FAM200BP0CF97 657 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 TRIM49P0CI25 452 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 TRIM49CP0CI26 452 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 ACO1P21399 889 aaKnown RBP8.93□□□□□ -0.98
USP28-203ENST00000537490 ATP5C1P36542 298 aaKnown RBP8.93□□□□□ -0.98
USP28-203ENST00000537490 WASP42768 502 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 INCA1Q0VD86 236 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 DPYDQ12882 1025 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 NFIL3Q16649 462 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 MAP7D1Q3KQU3 841 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 ARMCX6Q7L4S7 300 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 CYP2U1Q7Z449 544 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 MIB1Q86YT6 1006 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 TMEFF1Q8IYR6 380 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 PGBD3Q8N328 593 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 TERB1Q8NA31 727 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 HMGB4Q8WW32 186 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 PIGKQ92643 395 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 JAKMIP2Q96AA8 810 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 SPATA32Q96LK8 384 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 NT5C1AQ9BXI3 368 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 MMRN2Q9H8L6 949 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 NMUR1Q9HB89 426 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 POLMQ9NP87 494 aaPredicted RBP8.93□□□□□ -0.98
USP28-203ENST00000537490 CYLDQ9NQC7 956 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 BCCIPQ9P287 314 aaKnown RBP eCLIP8.93□□□□□ -0.98
USP28-203ENST00000537490 NUDT5Q9UKK9 219 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 CIZ1Q9ULV3 898 aaPredicted RBP8.93□□□□□ -0.98
USP28-203ENST00000537490 SCML2Q9UQR0 700 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 CACNA1BQ00975 2339 aa8.93□□□□□ -0.98
USP28-203ENST00000537490 MYOFQ9NZM1 2061 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 HELZP42694 1942 aaKnown RBP8.92□□□□□ -0.98
USP28-203ENST00000537490 MYO16Q9Y6X6 1858 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 A0A1W2PQH9 124 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 CYP26A1O43174 497 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 MAP3K13O43283 966 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 CILPO75339 1184 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 RARGP13631 454 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 GABRG2P18507 467 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 CD58P19256 250 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 NR2F2P24468 414 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 PTGER3P43115 390 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 KIF11P52732 1056 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 KRT85P78386 507 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 ADAM9Q13443 819 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 ST3GAL2Q16842 350 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 C10orf76Q5T2E6 689 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 EGFLAMQ63HQ2 1017 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 PSAPL1Q6NUJ1 521 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 KRBA2Q6ZNG9 492 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 TPGS1Q6ZTW0 290 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 TOGARAM2Q6ZUX3 1019 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 INTS8Q75QN2 995 aaKnown RBP8.92□□□□□ -0.98
USP28-203ENST00000537490 LPCAT2Q7L5N7 544 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 SCD5Q86SK9 330 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 FAM186BQ8IYM0 893 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 ZNF513Q8N8E2 541 aaPredicted RBP8.92□□□□□ -0.98
USP28-203ENST00000537490 KCNV2Q8TDN2 545 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 SEMA4DQ92854 862 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 P2RY11Q96G91 374 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 ACOX2Q99424 681 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 BBS2Q9BXC9 721 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 GOLPH3LQ9H4A5 285 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 CYP3A43Q9HB55 503 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 TMEM74BQ9NUR3 256 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 DNAJC17Q9NVM6 304 aaKnown RBP8.92□□□□□ -0.98
USP28-203ENST00000537490 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.92□□□□□ -0.98
USP28-203ENST00000537490 ANGPTL2Q9UKU9 493 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 STARD13Q9Y3M8 1113 aa8.92□□□□□ -0.98
USP28-203ENST00000537490 KIAA1549LQ6ZVL6 1849 aa8.91□□□□□ -0.98
USP28-203ENST00000537490 FRYLO94915 3013 aa8.91□□□□□ -0.98
USP28-203ENST00000537490 EPG5Q9HCE0 2579 aa8.91□□□□□ -0.98
USP28-203ENST00000537490 A0A1W2PQF6 199 aa8.91□□□□□ -0.98
USP28-203ENST00000537490 PRRT4C9JH25 899 aa8.91□□□□□ -0.98
USP28-203ENST00000537490 NEDD8-MDP1E9PL57 170 aa8.91□□□□□ -0.98
USP28-203ENST00000537490 CACNG3O60359 315 aa8.91□□□□□ -0.98
USP28-203ENST00000537490 KIF20AO95235 890 aa8.91□□□□□ -0.98
USP28-203ENST00000537490 CISD3P0C7P0 127 aa8.91□□□□□ -0.98
USP28-203ENST00000537490 KRT13P13646 458 aa8.91□□□□□ -0.98
USP28-203ENST00000537490 HOXB2P14652 356 aa8.91□□□□□ -0.98
USP28-203ENST00000537490 TYRP14679 529 aa8.91□□□□□ -0.98
USP28-203ENST00000537490 NTSR1P30989 418 aa8.91□□□□□ -0.98
USP28-203ENST00000537490 PSMC2P35998 433 aaKnown RBP8.91□□□□□ -0.98
USP28-203ENST00000537490 PLA2G4AP47712 749 aa8.91□□□□□ -0.98
USP28-203ENST00000537490 NOVA1P51513 510 aaKnown RBP8.91□□□□□ -0.98
USP28-203ENST00000537490 MCCD1P59942 119 aaPredicted RBP8.91□□□□□ -0.98
USP28-203ENST00000537490 SHC2P98077 582 aa8.91□□□□□ -0.98
USP28-203ENST00000537490 BYSLQ13895 437 aaKnown RBP8.91□□□□□ -0.98
USP28-203ENST00000537490 PREPLQ4J6C6 727 aaPredicted RBP8.91□□□□□ -0.98
USP28-203ENST00000537490 ZCWPW2Q504Y3 356 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms