RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 TTI2Q6NXR4 508 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 RHBDF2Q6PJF5 856 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 SLC36A4Q6YBV0 504 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 METTL3Q86U44 580 aaKnown RBP10.94□□□□□ -0.66
CSDE1-217ENST00000534699 PHTF2Q8N3S3 785 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 ST13P5Q8NFI4 369 aaPredicted RBP10.94□□□□□ -0.66
CSDE1-217ENST00000534699 OLIG1Q8TAK6 271 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 RIN3Q8TB24 985 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 STK32AQ8WU08 396 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 FAM84AQ96KN4 292 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 HEXIM2Q96MH2 286 aaKnown RBP10.94□□□□□ -0.66
CSDE1-217ENST00000534699 KCNK16Q96T55 309 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 VPS45Q9NRW7 570 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 TMEM30AQ9NV96 361 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 CHMP5Q9NZZ3 219 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 DEC1Q9P2X7 70 aa10.94□□□□□ -0.66
CSDE1-217ENST00000534699 SLC30A4O14863 429 aa10.93□□□□□ -0.66
CSDE1-217ENST00000534699 ZBTB24O43167 697 aaPredicted RBP10.93□□□□□ -0.66
CSDE1-217ENST00000534699 HRO43593 1189 aa10.93□□□□□ -0.66
CSDE1-217ENST00000534699 ZNF806P0C7X5 589 aa10.93□□□□□ -0.66
CSDE1-217ENST00000534699 CHRM1P11229 460 aaPredicted RBP10.93□□□□□ -0.66
CSDE1-217ENST00000534699 RARGP13631 454 aa10.93□□□□□ -0.66
CSDE1-217ENST00000534699 HNRNPLP14866 589 aaKnown RBP eCLIP10.93□□□□□ -0.665e-8■□□□□ 8.7
CSDE1-217ENST00000534699 CNGA2Q16280 664 aa10.93□□□□□ -0.66
CSDE1-217ENST00000534699 TRIM68Q6AZZ1 485 aa10.93□□□□□ -0.66
CSDE1-217ENST00000534699 GRAMD4Q6IC98 578 aa10.93□□□□□ -0.66
CSDE1-217ENST00000534699 MSANTD2Q6P1R3 559 aa10.93□□□□□ -0.66
CSDE1-217ENST00000534699 LCLAT1Q6UWP7 414 aa10.93□□□□□ -0.66
CSDE1-217ENST00000534699 FBRSQ9HAH7 460 aa10.93□□□□□ -0.66
CSDE1-217ENST00000534699 EML5Q05BV3 1969 aa10.93□□□□□ -0.66
CSDE1-217ENST00000534699 K7EQS6 105 aa10.93□□□□□ -0.66
CSDE1-217ENST00000534699 KAT7O95251 611 aa10.93□□□□□ -0.66
CSDE1-217ENST00000534699 ACADSBP45954 432 aa10.93□□□□□ -0.66
CSDE1-217ENST00000534699 RPL34P49207 117 aaKnown RBP10.93□□□□□ -0.66
CSDE1-217ENST00000534699 PAK1Q13153 545 aa10.93□□□□□ -0.66
CSDE1-217ENST00000534699 EIF4HQ15056 248 aaKnown RBP10.93□□□□□ -0.66
CSDE1-217ENST00000534699 CLEC17AQ6ZS10 378 aa10.93□□□□□ -0.66
CSDE1-217ENST00000534699 MLKLQ8NB16 471 aa10.93□□□□□ -0.66
CSDE1-217ENST00000534699 TSTD1Q8NFU3 115 aa10.93□□□□□ -0.66
CSDE1-217ENST00000534699 SEMA4DQ92854 862 aa10.93□□□□□ -0.66
CSDE1-217ENST00000534699 DDX50Q9BQ39 737 aaKnown RBP10.93□□□□□ -0.66
CSDE1-217ENST00000534699 HINFPQ9BQA5 517 aa10.93□□□□□ -0.66
CSDE1-217ENST00000534699 RBM12Q9NTZ6 932 aaKnown RBP10.93□□□□□ -0.66
CSDE1-217ENST00000534699 DACH1Q9UI36 760 aa10.93□□□□□ -0.66
CSDE1-217ENST00000534699 STOML2Q9UJZ1 356 aa10.93□□□□□ -0.66
CSDE1-217ENST00000534699 OTOL1A6NHN0 477 aaPredicted RBP10.92□□□□□ -0.66
CSDE1-217ENST00000534699 MED7O43513 233 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 TGM1P22735 817 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 SNX16P57768 344 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 CCDC142Q17RM4 750 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 CCDC40Q4G0X9 1142 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 PPP1R26Q5T8A7 1209 aaPredicted RBP10.92□□□□□ -0.66
CSDE1-217ENST00000534699 SPOPLQ6IQ16 392 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 SDE2Q6IQ49 451 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 Q6ZS52 159 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 FAM114A1Q8IWE2 563 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 TRIM59Q8IWR1 403 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 EHBP1Q8NDI1 1231 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 WFIKKN2Q8TEU8 576 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 SPACA7Q96KW9 195 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 LINC00597Q9H2U6 94 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 ARHGEF4Q9NR80 690 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 ABCC13Q9NSE7 274 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 EVLQ9UI08 416 aaPredicted RBP10.92□□□□□ -0.66
CSDE1-217ENST00000534699 RWDD2AQ9UIY3 292 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 CACNA1HO95180 2353 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.92□□□□□ -0.66
CSDE1-217ENST00000534699 PPP1R3GB7ZBB8 358 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 GREM1O60565 184 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 CYBBP04839 570 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 ADORA2BP29275 332 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 PKDCCQ504Y2 493 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 PLA2G2CQ5R387 149 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 RPLP0P6Q8NHW5 317 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 SCAMP5Q8TAC9 235 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 UCMAQ8WVF2 138 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 TWNKQ96RR1 684 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 PCED1AQ9H1Q7 454 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 MAPK8IP1Q9UQF2 711 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 TNRC6BQ9UPQ9 1833 aaKnown RBP10.92□□□□□ -0.66
CSDE1-217ENST00000534699 ZNF217O75362 1048 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 ABL1P00519 1130 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 KIR2DL1P43626 348 aaPredicted RBP10.92□□□□□ -0.66
CSDE1-217ENST00000534699 RING1Q06587 406 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 TRIP4Q15650 581 aaPredicted RBP10.92□□□□□ -0.66
CSDE1-217ENST00000534699 MPP7Q5T2T1 576 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 TCERG1LQ5VWI1 586 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 TSSK4Q6SA08 328 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 FAM160A2Q8N612 972 aaPredicted RBP10.92□□□□□ -0.66
CSDE1-217ENST00000534699 TERB1Q8NA31 727 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 NELFBQ8WX92 580 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 LRRC4Q9HBW1 653 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 HMGXB4Q9UGU5 601 aa10.92□□□□□ -0.66
CSDE1-217ENST00000534699 CHORDC1Q9UHD1 332 aaPredicted RBP10.92□□□□□ -0.66
CSDE1-217ENST00000534699 CDV3Q9UKY7 258 aaKnown RBP10.92□□□□□ -0.66
CSDE1-217ENST00000534699 IRAK2O43187 625 aa10.91□□□□□ -0.66
CSDE1-217ENST00000534699 BEST1O76090 585 aa10.91□□□□□ -0.66
CSDE1-217ENST00000534699 ZBED1O96006 694 aa10.91□□□□□ -0.66
CSDE1-217ENST00000534699 PENKP01210 267 aaPredicted RBP10.91□□□□□ -0.66
CSDE1-217ENST00000534699 AFPP02771 609 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms