RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 NUDT5Q9UKK9 219 aa9.4□□□□□ -0.9
COPB1-211ENST00000534234 PCDHGA5Q9Y5G8 931 aa9.4□□□□□ -0.9
COPB1-211ENST00000534234 PCDHA5Q9Y5H7 936 aa9.4□□□□□ -0.9
COPB1-211ENST00000534234 DCHS1Q96JQ0 3298 aa9.39□□□□□ -0.91
COPB1-211ENST00000534234 A0A1W2PQH9 124 aa9.39□□□□□ -0.91
COPB1-211ENST00000534234 GREM1O60565 184 aa9.39□□□□□ -0.91
COPB1-211ENST00000534234 TULP3O75386 442 aa9.39□□□□□ -0.91
COPB1-211ENST00000534234 ALDH1A2O94788 518 aa9.39□□□□□ -0.91
COPB1-211ENST00000534234 KLF8O95600 359 aaPredicted RBP9.39□□□□□ -0.91
COPB1-211ENST00000534234 RARGP13631 454 aa9.39□□□□□ -0.91
COPB1-211ENST00000534234 GBP1P32455 592 aa9.39□□□□□ -0.91
COPB1-211ENST00000534234 KIR2DL1P43626 348 aaPredicted RBP9.39□□□□□ -0.91
COPB1-211ENST00000534234 PLA2G4AP47712 749 aa9.39□□□□□ -0.91
COPB1-211ENST00000534234 PSEN1P49768 467 aa9.39□□□□□ -0.91
COPB1-211ENST00000534234 FKBP3Q00688 224 aaKnown RBP9.39□□□□□ -0.91
COPB1-211ENST00000534234 KDSRQ06136 332 aa9.39□□□□□ -0.91
COPB1-211ENST00000534234 GOLGA8FQ08AF8 430 aa9.39□□□□□ -0.91
COPB1-211ENST00000534234 GOLGA8DPQ0D2H9 430 aa9.39□□□□□ -0.91
COPB1-211ENST00000534234 HSF5Q4G112 596 aaPredicted RBP9.39□□□□□ -0.91
COPB1-211ENST00000534234 PREPLQ4J6C6 727 aaPredicted RBP9.39□□□□□ -0.91
COPB1-211ENST00000534234 AASDHQ4L235 1098 aaPredicted RBP9.39□□□□□ -0.91
COPB1-211ENST00000534234 C10orf120Q5SQS8 335 aa9.39□□□□□ -0.91
COPB1-211ENST00000534234 TCERG1LQ5VWI1 586 aa9.39□□□□□ -0.91
COPB1-211ENST00000534234 ANKRD40Q6AI12 368 aa9.39□□□□□ -0.91
COPB1-211ENST00000534234 KLHDC10Q6PID8 442 aa9.39□□□□□ -0.91
COPB1-211ENST00000534234 NUDT18Q6ZVK8 323 aa9.39□□□□□ -0.91
COPB1-211ENST00000534234 RASSF3Q86WH2 238 aa9.39□□□□□ -0.91
COPB1-211ENST00000534234 ETFBKMTQ8IXQ9 262 aa9.39□□□□□ -0.91
COPB1-211ENST00000534234 C12orf50Q8NA57 414 aaPredicted RBP9.39□□□□□ -0.91
COPB1-211ENST00000534234 ERCC4Q92889 916 aaPredicted RBP9.39□□□□□ -0.91
COPB1-211ENST00000534234 TMEM176AQ96HP8 235 aa9.39□□□□□ -0.91
COPB1-211ENST00000534234 CNOT6LQ96LI5 555 aaKnown RBP9.39□□□□□ -0.91
COPB1-211ENST00000534234 TSG101Q99816 390 aa9.39□□□□□ -0.91
COPB1-211ENST00000534234 ZDHHC4Q9NPG8 344 aa9.39□□□□□ -0.91
COPB1-211ENST00000534234 CISHQ9NSE2 258 aa9.39□□□□□ -0.91
COPB1-211ENST00000534234 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.39□□□□□ -0.91
COPB1-211ENST00000534234 DNMT3LQ9UJW3 386 aa9.39□□□□□ -0.91
COPB1-211ENST00000534234 NAGPAQ9UK23 515 aa9.39□□□□□ -0.91
COPB1-211ENST00000534234 LSM7Q9UK45 103 aaKnown RBP9.39□□□□□ -0.91
COPB1-211ENST00000534234 SGK1O00141 431 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 MDM4O15151 490 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 TRIM24O15164 1050 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 HOXC11O43248 304 aaPredicted RBP9.38□□□□□ -0.91
COPB1-211ENST00000534234 HNRNPLP14866 589 aaKnown RBP eCLIP9.38□□□□□ -0.912e-6■□□□□ 8.3
COPB1-211ENST00000534234 MPLP40238 635 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 RAD23BP54727 409 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 CREB5Q02930 508 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 COBLL1Q53SF7 1204 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 EOGTQ5NDL2 527 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 PLA2G2CQ5R387 149 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 TPGS1Q6ZTW0 290 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 CCDC186Q7Z3E2 898 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 SCD5Q86SK9 330 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 PHTF2Q8N3S3 785 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 ZNF276Q8N554 614 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 SLC4A11Q8NBS3 891 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 MDGA1Q8NFP4 955 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 SPATA20Q8TB22 786 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 KCNV2Q8TDN2 545 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 SMARCE1Q969G3 411 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 TIGD1Q96MW7 591 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 ARID3AQ99856 593 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 SMOC1Q9H4F8 434 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 POLMQ9NP87 494 aaPredicted RBP9.38□□□□□ -0.91
COPB1-211ENST00000534234 VPS45Q9NRW7 570 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 RXFP3Q9NSD7 469 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 HOOK1Q9UJC3 728 aaKnown RBP9.38□□□□□ -0.91
COPB1-211ENST00000534234 COQ4Q9Y3A0 265 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 USP3Q9Y6I4 520 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 CACNA1AO00555 2505 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 CEP250Q9BV73 2442 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 DMXL1Q9Y485 3027 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 DNAH14Q0VDD8 3507 aa9.38□□□□□ -0.91
COPB1-211ENST00000534234 KIF26AQ9ULI4 1882 aaPredicted RBP9.37□□□□□ -0.91
COPB1-211ENST00000534234 SLC16A3O15427 465 aaKnown RBP9.37□□□□□ -0.91
COPB1-211ENST00000534234 ADAM23O75077 832 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 CHRM1P11229 460 aaPredicted RBP9.37□□□□□ -0.91
COPB1-211ENST00000534234 RALAP11233 206 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 PMS1P54277 932 aaKnown RBP9.37□□□□□ -0.91
COPB1-211ENST00000534234 SLC8A3P57103 927 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 LRRC63Q05C16 580 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 CBWD6Q4V339 395 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 DCAF17Q5H9S7 520 aaPredicted RBP9.37□□□□□ -0.91
COPB1-211ENST00000534234 CBWD3Q5JTY5 395 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 CBWD5Q5RIA9 395 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 C10orf76Q5T2E6 689 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 IL31Q6EBC2 164 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 ISM2Q6H9L7 571 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 TADA2BQ86TJ2 420 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 C11orf74Q86VG3 221 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 MIB1Q86YT6 1006 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 ZNF513Q8N8E2 541 aaPredicted RBP9.37□□□□□ -0.91
COPB1-211ENST00000534234 ANKRD52Q8NB46 1076 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 XPO6Q96QU8 1125 aaKnown RBP9.37□□□□□ -0.91
COPB1-211ENST00000534234 BBS2Q9BXC9 721 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 GTPBP4Q9BZE4 634 aaKnown RBP9.37□□□□□ -0.91
COPB1-211ENST00000534234 UBXN6Q9BZV1 441 aa9.37□□□□□ -0.91
COPB1-211ENST00000534234 FAM124BQ9H5Z6 455 aaPredicted RBP9.37□□□□□ -0.91
COPB1-211ENST00000534234 RTN4Q9NQC3 1192 aaKnown RBP9.37□□□□□ -0.91
COPB1-211ENST00000534234 CLIC5Q9NZA1 410 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms