RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 MAGEB5Q9BZ81 275 aa29.64■■■□□ 2.34
SAMD1-202ENST00000533683 HEY1Q9Y5J3 304 aa29.64■■■□□ 2.34
SAMD1-202ENST00000533683 A0A087WUV0 522 aaPredicted RBP29.63■■■□□ 2.33
SAMD1-202ENST00000533683 CASTOR2A6NHX0 329 aa29.63■■■□□ 2.33
SAMD1-202ENST00000533683 CST5P28325 142 aaPredicted RBP29.63■■■□□ 2.33
SAMD1-202ENST00000533683 TMEM86AQ8N2M4 240 aa29.63■■■□□ 2.33
SAMD1-202ENST00000533683 ZNF473Q8WTR7 871 aaKnown RBP29.63■■■□□ 2.33
SAMD1-202ENST00000533683 MED10Q9BTT4 135 aa29.63■■■□□ 2.33
SAMD1-202ENST00000533683 DHX35Q9H5Z1 703 aaKnown RBP29.63■■■□□ 2.33
SAMD1-202ENST00000533683 USP29Q9HBJ7 922 aa29.63■■■□□ 2.33
SAMD1-202ENST00000533683 LGALS13Q9UHV8 139 aa29.63■■■□□ 2.33
SAMD1-202ENST00000533683 TCRBV7S3A2A0A539 114 aa29.63■■■□□ 2.33
SAMD1-202ENST00000533683 ZNF487B1APH4 448 aa29.63■■■□□ 2.33
SAMD1-202ENST00000533683 ZNF623O75123 536 aa29.63■■■□□ 2.33
SAMD1-202ENST00000533683 LHX1P48742 406 aa29.63■■■□□ 2.33
SAMD1-202ENST00000533683 DEFB106AQ8N104 65 aa29.63■■■□□ 2.33
SAMD1-202ENST00000533683 CCDC185Q8N715 623 aa29.63■■■□□ 2.33
SAMD1-202ENST00000533683 KCTD13Q8WZ19 329 aa29.63■■■□□ 2.33
SAMD1-202ENST00000533683 FAM149B1Q96BN6 582 aa29.63■■■□□ 2.33
SAMD1-202ENST00000533683 XPO6Q96QU8 1125 aaKnown RBP29.63■■■□□ 2.33
SAMD1-202ENST00000533683 MTMR10Q9NXD2 777 aa29.63■■■□□ 2.33
SAMD1-202ENST00000533683 AP4E1Q9UPM8 1137 aa29.63■■■□□ 2.33
SAMD1-202ENST00000533683 EBAG9O00559 213 aa29.62■■■□□ 2.33
SAMD1-202ENST00000533683 CDH16O75309 829 aa29.62■■■□□ 2.33
SAMD1-202ENST00000533683 BANF1O75531 89 aa29.62■■■□□ 2.33
SAMD1-202ENST00000533683 ATP5DP30049 168 aa29.62■■■□□ 2.33
SAMD1-202ENST00000533683 RDXP35241 583 aaKnown RBP29.62■■■□□ 2.33
SAMD1-202ENST00000533683 NDUFV1P49821 464 aa29.62■■■□□ 2.33
SAMD1-202ENST00000533683 MRPS5P82675 430 aaKnown RBP29.62■■■□□ 2.33
SAMD1-202ENST00000533683 DSTYKQ6XUX3 929 aa29.62■■■□□ 2.33
SAMD1-202ENST00000533683 STRADAQ7RTN6 431 aa29.62■■■□□ 2.33
SAMD1-202ENST00000533683 CYP4X1Q8N118 509 aa29.62■■■□□ 2.33
SAMD1-202ENST00000533683 NRDE2Q9H7Z3 1164 aa29.62■■■□□ 2.33
SAMD1-202ENST00000533683 NAALADL1Q9UQQ1 740 aa29.62■■■□□ 2.33
SAMD1-202ENST00000533683 CYP2F1P24903 491 aa29.62■■■□□ 2.33
SAMD1-202ENST00000533683 LPIN1Q14693 890 aa29.62■■■□□ 2.33
SAMD1-202ENST00000533683 UPP1Q16831 310 aa29.62■■■□□ 2.33
SAMD1-202ENST00000533683 FNBP1LQ5T0N5 605 aa29.62■■■□□ 2.33
SAMD1-202ENST00000533683 CCDC13Q8IYE1 715 aa29.62■■■□□ 2.33
SAMD1-202ENST00000533683 RNF169Q8NCN4 708 aa29.62■■■□□ 2.33
SAMD1-202ENST00000533683 SYT15Q9BQS2 421 aa29.62■■■□□ 2.33
SAMD1-202ENST00000533683 FAM107BQ9H098 131 aa29.62■■■□□ 2.33
SAMD1-202ENST00000533683 KRT82Q9NSB4 513 aa29.62■■■□□ 2.33
SAMD1-202ENST00000533683 EURLQ9NYK6 297 aa29.62■■■□□ 2.33
SAMD1-202ENST00000533683 FOXO6A8MYZ6 492 aa29.61■■■□□ 2.33
SAMD1-202ENST00000533683 TMEM63AO94886 807 aa29.61■■■□□ 2.33
SAMD1-202ENST00000533683 RPL9P32969 192 aaKnown RBP29.61■■■□□ 2.33
SAMD1-202ENST00000533683 MAP3K7CLP57077 242 aa29.61■■■□□ 2.33
SAMD1-202ENST00000533683 SP3Q02447 781 aa29.61■■■□□ 2.33
SAMD1-202ENST00000533683 DSC3Q14574 896 aa29.61■■■□□ 2.33
SAMD1-202ENST00000533683 SLC25A52Q3SY17 297 aa29.61■■■□□ 2.33
SAMD1-202ENST00000533683 MSS51Q4VC12 460 aa29.61■■■□□ 2.33
SAMD1-202ENST00000533683 ATXN2LQ8WWM7 1075 aaKnown RBP29.61■■■□□ 2.33
SAMD1-202ENST00000533683 LRRC4Q9HBW1 653 aa29.61■■■□□ 2.33
SAMD1-202ENST00000533683 TBK1Q9UHD2 729 aa29.61■■■□□ 2.33
SAMD1-202ENST00000533683 AOC2O75106 756 aa29.6■■■□□ 2.33
SAMD1-202ENST00000533683 FAM200BP0CF97 657 aa29.6■■■□□ 2.33
SAMD1-202ENST00000533683 CREB1P16220 341 aa29.6■■■□□ 2.33
SAMD1-202ENST00000533683 ARL4CP56559 192 aa29.6■■■□□ 2.33
SAMD1-202ENST00000533683 YWHAZP63104 245 aaKnown RBP29.6■■■□□ 2.33
SAMD1-202ENST00000533683 BASP1P80723 227 aaKnown RBP29.6■■■□□ 2.33
SAMD1-202ENST00000533683 PHACTR1Q9C0D0 580 aa29.6■■■□□ 2.33
SAMD1-202ENST00000533683 TRMT13Q9NUP7 481 aaKnown RBP29.6■■■□□ 2.33
SAMD1-202ENST00000533683 BRCA2P51587 3418 aa29.6■■■□□ 2.33
SAMD1-202ENST00000533683 MYBPHLA2RUH7 354 aa29.6■■■□□ 2.33
SAMD1-202ENST00000533683 DAB1O75553 588 aa29.6■■■□□ 2.33
SAMD1-202ENST00000533683 MAP3K6O95382 1288 aa29.6■■■□□ 2.33
SAMD1-202ENST00000533683 IBSPP21815 317 aaPredicted RBP29.6■■■□□ 2.33
SAMD1-202ENST00000533683 RAB27AP51159 221 aa29.6■■■□□ 2.33
SAMD1-202ENST00000533683 DCAF6Q58WW2 860 aa29.6■■■□□ 2.33
SAMD1-202ENST00000533683 ANKMY2Q8IV38 441 aa29.6■■■□□ 2.33
SAMD1-202ENST00000533683 PCSK9Q8NBP7 692 aaKnown RBP29.6■■■□□ 2.33
SAMD1-202ENST00000533683 KCTD15Q96SI1 283 aaPredicted RBP29.6■■■□□ 2.33
SAMD1-202ENST00000533683 VPS37BQ9H9H4 285 aa29.6■■■□□ 2.33
SAMD1-202ENST00000533683 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP29.59■■■□□ 2.33
SAMD1-202ENST00000533683 A0A0U1RQF3 1178 aa29.59■■■□□ 2.33
SAMD1-202ENST00000533683 SULT1E1P49888 294 aa29.59■■■□□ 2.33
SAMD1-202ENST00000533683 TIGD5Q53EQ6 642 aa29.59■■■□□ 2.33
SAMD1-202ENST00000533683 FAM182AQ5T1J6 154 aa29.59■■■□□ 2.33
SAMD1-202ENST00000533683 INTS9Q9NV88 658 aaKnown RBP29.59■■■□□ 2.33
SAMD1-202ENST00000533683 XPO7Q9UIA9 1087 aaKnown RBP29.59■■■□□ 2.33
SAMD1-202ENST00000533683 GTF3C5Q9Y5Q8 519 aaPredicted RBP29.59■■■□□ 2.33
SAMD1-202ENST00000533683 EXOC1LA0A1B0GW35 172 aa29.59■■■□□ 2.33
SAMD1-202ENST00000533683 SMAPO00193 183 aa29.59■■■□□ 2.33
SAMD1-202ENST00000533683 KCNN4O15554 427 aa29.59■■■□□ 2.33
SAMD1-202ENST00000533683 POMCP01189 267 aa29.59■■■□□ 2.33
SAMD1-202ENST00000533683 GCAP28676 217 aa29.59■■■□□ 2.33
SAMD1-202ENST00000533683 PITX1P78337 314 aaPredicted RBP29.59■■■□□ 2.33
SAMD1-202ENST00000533683 ITGA7Q13683 1181 aa29.59■■■□□ 2.33
SAMD1-202ENST00000533683 CAPN12Q6ZSI9 719 aa29.59■■■□□ 2.33
SAMD1-202ENST00000533683 FAM131BQ86XD5 332 aa29.59■■■□□ 2.33
SAMD1-202ENST00000533683 SIX6OS1Q8N1H7 587 aa29.59■■■□□ 2.33
SAMD1-202ENST00000533683 RTP4Q96DX8 246 aa29.59■■■□□ 2.33
SAMD1-202ENST00000533683 PCED1BQ96HM7 432 aa29.59■■■□□ 2.33
SAMD1-202ENST00000533683 RBL1P28749 1068 aa29.58■■■□□ 2.33
SAMD1-202ENST00000533683 TKTL1P51854 596 aa29.58■■■□□ 2.33
SAMD1-202ENST00000533683 RABGGTBP53611 331 aa29.58■■■□□ 2.33
SAMD1-202ENST00000533683 PTK7Q13308 1070 aa29.58■■■□□ 2.33
SAMD1-202ENST00000533683 OTUD1Q5VV17 481 aaPredicted RBP29.58■■■□□ 2.33
SAMD1-202ENST00000533683 FAM35AQ86V20 835 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms