RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 LACRTQ9GZZ8 138 aa12.48□□□□□ -0.41
COMMD9-208ENST00000533643 ATXN3LQ9H3M9 355 aa12.48□□□□□ -0.41
COMMD9-208ENST00000533643 POPDC2Q9HBU9 364 aa12.48□□□□□ -0.41
COMMD9-208ENST00000533643 WDR6Q9NNW5 1121 aaKnown RBP12.48□□□□□ -0.41
COMMD9-208ENST00000533643 METTL5Q9NRN9 209 aaKnown RBP12.48□□□□□ -0.41
COMMD9-208ENST00000533643 ABCC13Q9NSE7 274 aa12.48□□□□□ -0.41
COMMD9-208ENST00000533643 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.48□□□□□ -0.41
COMMD9-208ENST00000533643 CLIC5Q9NZA1 410 aa12.48□□□□□ -0.41
COMMD9-208ENST00000533643 CD207Q9UJ71 328 aa12.48□□□□□ -0.41
COMMD9-208ENST00000533643 PYCARDQ9ULZ3 195 aa12.48□□□□□ -0.41
COMMD9-208ENST00000533643 TMEM191CA6NGB0 347 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 ZNF197O14709 1029 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 PJA2O43164 708 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 DAB1O75553 588 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 RARGP13631 454 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 KCNA5P22460 613 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 RFC1P35251 1148 aaPredicted RBP12.47□□□□□ -0.41
COMMD9-208ENST00000533643 FLT3P36888 993 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 MTHFRP42898 656 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 RPL7AP62424 266 aaKnown RBP12.47□□□□□ -0.41
COMMD9-208ENST00000533643 CYP4F8P98187 520 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 TCEAL1Q15170 157 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 TEAD2Q15562 447 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 ATAT1Q5SQI0 421 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 HECTD3Q5T447 861 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 SYPL2Q5VXT5 272 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 BTBD8Q5XKL5 378 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 TXNDC8Q6A555 127 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 TRNP1Q6NT89 227 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 POTEHQ6S545 545 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 BEND5Q7L4P6 421 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 ARCQ7LC44 396 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 DEFB106AQ8N104 65 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 ZNF276Q8N554 614 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 EMC1Q8N766 993 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 ITFG1Q8TB96 612 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 SLC35G2Q8TBE7 412 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 MRPS31Q92665 395 aaKnown RBP12.47□□□□□ -0.41
COMMD9-208ENST00000533643 GOLGA1Q92805 767 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 HLA-CQ95604 372 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 RIPOR3Q96MK2 946 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 MCEEQ96PE7 176 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 GCNAQ96QF7 691 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 DDX23Q9BUQ8 820 aaKnown RBP12.47□□□□□ -0.41
COMMD9-208ENST00000533643 SELENOOQ9BVL4 669 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 NUP85Q9BW27 656 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 TRIM7Q9C029 511 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 CCSER2Q9H7U1 834 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 MRPL47Q9HD33 250 aaKnown RBP12.47□□□□□ -0.41
COMMD9-208ENST00000533643 CTTNBP2NLQ9P2B4 639 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 COG5Q9UP83 839 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 NAALADL1Q9UQQ1 740 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 PPP2R2CQ9Y2T4 447 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 MRPS23Q9Y3D9 190 aaKnown RBP12.47□□□□□ -0.41
COMMD9-208ENST00000533643 SCINQ9Y6U3 715 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 DUSP10Q9Y6W6 482 aa12.47□□□□□ -0.41
COMMD9-208ENST00000533643 CLUHO75153 1309 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 NOTCH4Q99466 2003 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 C2orf78A6NCI8 922 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 GRXCR2A6NFK2 248 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 C2CD4BA6NLJ0 364 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 TLR5O60602 858 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 TBX18O95935 607 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 CCDC175P0C221 793 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 RALAP11233 206 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 NCAM1P13591 858 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 PDGFRAP16234 1089 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 CEBPBP17676 345 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 FSHRP23945 695 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 TUBP50607 506 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 OGDHQ02218 1023 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 DCAF6Q58WW2 860 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 C10orf120Q5SQS8 335 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 STXBP5Q5T5C0 1151 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 MSANTD2Q6P1R3 559 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 DCUN1D2Q6PH85 259 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 MAFAQ8NHW3 353 aaPredicted RBP12.46□□□□□ -0.41
COMMD9-208ENST00000533643 RXFP2Q8WXD0 754 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 ING5Q8WYH8 240 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 RFFLQ8WZ73 363 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 SUSD6Q92537 303 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 SLC22A12Q96S37 553 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 CYP2S1Q96SQ9 504 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 TRIM62Q9BVG3 475 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 SLC46A2Q9BY10 475 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 TASP1Q9H6P5 420 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.46□□□□□ -0.41
COMMD9-208ENST00000533643 UVRAGQ9P2Y5 699 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 SALL4Q9UJQ4 1053 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 NUDT5Q9UKK9 219 aa12.46□□□□□ -0.41
COMMD9-208ENST00000533643 USP15Q9Y4E8 981 aaPredicted RBP12.46□□□□□ -0.41
COMMD9-208ENST00000533643 ZNF638Q14966 1978 aaKnown RBP12.45□□□□□ -0.42
COMMD9-208ENST00000533643 A0A0A6YYK5 440 aaPredicted RBP12.45□□□□□ -0.42
COMMD9-208ENST00000533643 BTNL10A8MVZ5 291 aa12.45□□□□□ -0.42
COMMD9-208ENST00000533643 CAPN9O14815 690 aa12.45□□□□□ -0.42
COMMD9-208ENST00000533643 MDM4O15151 490 aa12.45□□□□□ -0.42
COMMD9-208ENST00000533643 COCHO43405 550 aa12.45□□□□□ -0.42
COMMD9-208ENST00000533643 MTA2O94776 668 aa12.45□□□□□ -0.42
COMMD9-208ENST00000533643 OAS1P00973 400 aaKnown RBP12.45□□□□□ -0.42
COMMD9-208ENST00000533643 TFE3P19532 575 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms