RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 LY6G5CQ5SRR4 150 aa16.68■□□□□ 0.26
CHMP4A-207ENST00000533523 EMC10Q5UCC4 262 aa16.68■□□□□ 0.26
CHMP4A-207ENST00000533523 LYSMD4Q5XG99 296 aa16.68■□□□□ 0.26
CHMP4A-207ENST00000533523 KIAA1211LQ6NV74 962 aa16.68■□□□□ 0.26
CHMP4A-207ENST00000533523 RHBDF2Q6PJF5 856 aa16.68■□□□□ 0.26
CHMP4A-207ENST00000533523 SCARA5Q6ZMJ2 495 aa16.68■□□□□ 0.26
CHMP4A-207ENST00000533523 RBM43Q6ZSC3 357 aaKnown RBP16.68■□□□□ 0.26
CHMP4A-207ENST00000533523 C12orf56Q8IXR9 622 aa16.68■□□□□ 0.26
CHMP4A-207ENST00000533523 ADGRG2Q8IZP9 1017 aa16.68■□□□□ 0.26
CHMP4A-207ENST00000533523 FRMD1Q8N878 549 aa16.68■□□□□ 0.26
CHMP4A-207ENST00000533523 KIAA1958Q8N8K9 716 aa16.68■□□□□ 0.26
CHMP4A-207ENST00000533523 PDZD8Q8NEN9 1154 aa16.68■□□□□ 0.26
CHMP4A-207ENST00000533523 ERCC4Q92889 916 aaPredicted RBP16.68■□□□□ 0.26
CHMP4A-207ENST00000533523 SCNM1Q9BWG6 230 aa16.68■□□□□ 0.26
CHMP4A-207ENST00000533523 NXF1Q9UBU9 619 aaKnown RBP16.68■□□□□ 0.26
CHMP4A-207ENST00000533523 EVLQ9UI08 416 aaPredicted RBP16.68■□□□□ 0.26
CHMP4A-207ENST00000533523 MBD1Q9UIS9 605 aaPredicted RBP16.68■□□□□ 0.26
CHMP4A-207ENST00000533523 PCDH15Q96QU1 1955 aa16.68■□□□□ 0.26
CHMP4A-207ENST00000533523 CLIC2O15247 247 aa16.67■□□□□ 0.26
CHMP4A-207ENST00000533523 TGFB1I1O43294 461 aa16.67■□□□□ 0.26
CHMP4A-207ENST00000533523 COCHO43405 550 aa16.67■□□□□ 0.26
CHMP4A-207ENST00000533523 RTN3O95197 1032 aaPredicted RBP16.67■□□□□ 0.26
CHMP4A-207ENST00000533523 LETM1O95202 739 aaPredicted RBP16.67■□□□□ 0.26
CHMP4A-207ENST00000533523 CFIP05156 583 aa16.67■□□□□ 0.26
CHMP4A-207ENST00000533523 IRF1P10914 325 aa16.67■□□□□ 0.26
CHMP4A-207ENST00000533523 CHRM1P11229 460 aaPredicted RBP16.67■□□□□ 0.26
CHMP4A-207ENST00000533523 YWHAQP27348 245 aa16.67■□□□□ 0.26
CHMP4A-207ENST00000533523 PTGER3P43115 390 aa16.67■□□□□ 0.26
CHMP4A-207ENST00000533523 KIR2DL1P43626 348 aaPredicted RBP16.67■□□□□ 0.26
CHMP4A-207ENST00000533523 PSMD6Q15008 389 aa16.67■□□□□ 0.26
CHMP4A-207ENST00000533523 BTBD8Q5XKL5 378 aa16.67■□□□□ 0.26
CHMP4A-207ENST00000533523 NUP93Q8N1F7 819 aa16.67■□□□□ 0.26
CHMP4A-207ENST00000533523 XXYLT1Q8NBI6 393 aa16.67■□□□□ 0.26
CHMP4A-207ENST00000533523 MED10Q9BTT4 135 aa16.67■□□□□ 0.26
CHMP4A-207ENST00000533523 B3GNT5Q9BYG0 378 aa16.67■□□□□ 0.26
CHMP4A-207ENST00000533523 SMYD3Q9H7B4 428 aa16.67■□□□□ 0.26
CHMP4A-207ENST00000533523 TBC1D14Q9P2M4 693 aa16.67■□□□□ 0.26
CHMP4A-207ENST00000533523 SH3BP1Q9Y3L3 701 aa16.67■□□□□ 0.26
CHMP4A-207ENST00000533523 ACACAQ13085 2346 aa16.67■□□□□ 0.26
CHMP4A-207ENST00000533523 E2F8A0AVK6 867 aa16.66■□□□□ 0.26
CHMP4A-207ENST00000533523 SYCE3A1L190 88 aa16.66■□□□□ 0.26
CHMP4A-207ENST00000533523 TNFRSF10BO14763 440 aa16.66■□□□□ 0.26
CHMP4A-207ENST00000533523 ADAM23O75077 832 aa16.66■□□□□ 0.26
CHMP4A-207ENST00000533523 CST3P01034 146 aaPredicted RBP16.66■□□□□ 0.26
CHMP4A-207ENST00000533523 ENGP17813 658 aa16.66■□□□□ 0.26
CHMP4A-207ENST00000533523 TNFRSF4P43489 277 aa16.66■□□□□ 0.26
CHMP4A-207ENST00000533523 SLC5A3P53794 718 aa16.66■□□□□ 0.26
CHMP4A-207ENST00000533523 MYL6P60660 151 aa16.66■□□□□ 0.26
CHMP4A-207ENST00000533523 GAD2Q05329 585 aa16.66■□□□□ 0.26
CHMP4A-207ENST00000533523 STK4Q13043 487 aa16.66■□□□□ 0.26
CHMP4A-207ENST00000533523 BYSLQ13895 437 aaKnown RBP16.66■□□□□ 0.26
CHMP4A-207ENST00000533523 FAM35AQ86V20 835 aa16.66■□□□□ 0.26
CHMP4A-207ENST00000533523 SYT12Q8IV01 421 aa16.66■□□□□ 0.26
CHMP4A-207ENST00000533523 ZNF513Q8N8E2 541 aaPredicted RBP16.66■□□□□ 0.26
CHMP4A-207ENST00000533523 NAT16Q8N8M0 369 aa16.66■□□□□ 0.26
CHMP4A-207ENST00000533523 KIAA0895Q8NCT3 520 aa16.66■□□□□ 0.26
CHMP4A-207ENST00000533523 ZFRQ96KR1 1074 aaKnown RBP16.66■□□□□ 0.26
CHMP4A-207ENST00000533523 ANP32EQ9BTT0 268 aa16.66■□□□□ 0.26
CHMP4A-207ENST00000533523 NACA2Q9H009 215 aa16.66■□□□□ 0.26
CHMP4A-207ENST00000533523 CCSER2Q9H7U1 834 aa16.66■□□□□ 0.26
CHMP4A-207ENST00000533523 KIAA1468Q9P260 1216 aa16.66■□□□□ 0.26
CHMP4A-207ENST00000533523 LHX6Q9UPM6 363 aa16.66■□□□□ 0.26
CHMP4A-207ENST00000533523 PLXNB3Q9ULL4 1909 aa16.66■□□□□ 0.26
CHMP4A-207ENST00000533523 APC2O95996 2303 aa16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 TBC1D3BA6NDS4 549 aa16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 PHACTR2O75167 634 aa16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 RHOBTB3O94955 611 aa16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 SMC2O95347 1197 aa16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 ZIC2O95409 532 aaPredicted RBP16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 ITPKAP23677 461 aa16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 DPYDQ12882 1025 aa16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 BIRC3Q13489 604 aa16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 MAP7D1Q3KQU3 841 aa16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 C10orf76Q5T2E6 689 aa16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 HECTD3Q5T447 861 aa16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 TRMT11Q7Z4G4 463 aaKnown RBP16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 PHTF2Q8N3S3 785 aa16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 SCAMP5Q8TAC9 235 aa16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 ZCCHC14Q8WYQ9 949 aaKnown RBP16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 OVCA2Q8WZ82 227 aa16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 SMARCE1Q969G3 411 aa16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 OTUB2Q96DC9 234 aa16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 SLC32A1Q9H598 525 aa16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 DMAP1Q9NPF5 467 aaPredicted RBP16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 FSCN3Q9NQT6 498 aa16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 KRT82Q9NSB4 513 aa16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 TMEM74BQ9NUR3 256 aa16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 GMIPQ9P107 970 aa16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 KLK13Q9UKR3 277 aa16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 PCDHA5Q9Y5H7 936 aa16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 KNL1Q8NG31 2342 aa16.65■□□□□ 0.26
CHMP4A-207ENST00000533523 HOXC11O43248 304 aaPredicted RBP16.64■□□□□ 0.25
CHMP4A-207ENST00000533523 EXOC3O60645 756 aa16.64■□□□□ 0.25
CHMP4A-207ENST00000533523 TULP3O75386 442 aa16.64■□□□□ 0.25
CHMP4A-207ENST00000533523 HOXB2P14652 356 aa16.64■□□□□ 0.25
CHMP4A-207ENST00000533523 DPP6P42658 865 aa16.64■□□□□ 0.25
CHMP4A-207ENST00000533523 WASP42768 502 aa16.64■□□□□ 0.25
CHMP4A-207ENST00000533523 ATXN3P54252 364 aaPredicted RBP16.64■□□□□ 0.25
CHMP4A-207ENST00000533523 RPL6Q02878 288 aaKnown RBP16.64■□□□□ 0.25
CHMP4A-207ENST00000533523 ANO4Q32M45 955 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms