RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 MYO18AQ92614 2054 aaKnown RBP11.93□□□□□ -0.5
CLCF1-202ENST00000533438 THADAQ6YHU6 1953 aa11.93□□□□□ -0.5
CLCF1-202ENST00000533438 CETN3O15182 167 aa11.93□□□□□ -0.5
CLCF1-202ENST00000533438 HOXC11O43248 304 aaPredicted RBP11.93□□□□□ -0.5
CLCF1-202ENST00000533438 KAT7O95251 611 aa11.93□□□□□ -0.5
CLCF1-202ENST00000533438 CD58P19256 250 aa11.93□□□□□ -0.5
CLCF1-202ENST00000533438 TRIM21P19474 475 aaKnown RBP11.93□□□□□ -0.5
CLCF1-202ENST00000533438 KIR2DL1P43626 348 aaPredicted RBP11.93□□□□□ -0.5
CLCF1-202ENST00000533438 MXI1P50539 228 aa11.93□□□□□ -0.5
CLCF1-202ENST00000533438 GAD2Q05329 585 aa11.93□□□□□ -0.5
CLCF1-202ENST00000533438 ST3GAL2Q16842 350 aa11.93□□□□□ -0.5
CLCF1-202ENST00000533438 ZSCAN23Q3MJ62 389 aa11.93□□□□□ -0.5
CLCF1-202ENST00000533438 PLA2G2CQ5R387 149 aa11.93□□□□□ -0.5
CLCF1-202ENST00000533438 PPP1R26Q5T8A7 1209 aaPredicted RBP11.93□□□□□ -0.5
CLCF1-202ENST00000533438 ZNF658Q5TYW1 1059 aaPredicted RBP11.93□□□□□ -0.5
CLCF1-202ENST00000533438 HTR3DQ70Z44 454 aa11.93□□□□□ -0.5
CLCF1-202ENST00000533438 ETFBKMTQ8IXQ9 262 aa11.93□□□□□ -0.5
CLCF1-202ENST00000533438 CCDC150Q8NCX0 1101 aa11.93□□□□□ -0.5
CLCF1-202ENST00000533438 FBXL13Q8NEE6 735 aa11.93□□□□□ -0.5
CLCF1-202ENST00000533438 ANP32EQ9BTT0 268 aa11.93□□□□□ -0.5
CLCF1-202ENST00000533438 KLF16Q9BXK1 252 aaPredicted RBP11.93□□□□□ -0.5
CLCF1-202ENST00000533438 DUSP15Q9H1R2 295 aaPredicted RBP11.93□□□□□ -0.5
CLCF1-202ENST00000533438 ARRDC1-AS1Q9H2J1 176 aa11.93□□□□□ -0.5
CLCF1-202ENST00000533438 SPHK2Q9NRA0 654 aa11.93□□□□□ -0.5
CLCF1-202ENST00000533438 RMND1Q9NWS8 449 aa11.93□□□□□ -0.5
CLCF1-202ENST00000533438 RAB20Q9NX57 234 aa11.93□□□□□ -0.5
CLCF1-202ENST00000533438 KIAA1468Q9P260 1216 aa11.93□□□□□ -0.5
CLCF1-202ENST00000533438 PCDHA5Q9Y5H7 936 aa11.93□□□□□ -0.5
CLCF1-202ENST00000533438 TNRC6BQ9UPQ9 1833 aaKnown RBP11.93□□□□□ -0.5
CLCF1-202ENST00000533438 SPTBN2O15020 2390 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.92□□□□□ -0.5
CLCF1-202ENST00000533438 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.92□□□□□ -0.5
CLCF1-202ENST00000533438 SLC16A3O15427 465 aaKnown RBP11.92□□□□□ -0.5
CLCF1-202ENST00000533438 CYP26A1O43174 497 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 GDF9O60383 454 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 TBX18O95935 607 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 APODP05090 189 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 ZNF806P0C7X5 589 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 EPB41P11171 864 aaKnown RBP11.92□□□□□ -0.5
CLCF1-202ENST00000533438 ACO1P21399 889 aaKnown RBP11.92□□□□□ -0.5
CLCF1-202ENST00000533438 ATP5C1P36542 298 aaKnown RBP11.92□□□□□ -0.5
CLCF1-202ENST00000533438 GRIA2P42262 883 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 DGKEP52429 567 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 KIF11P52732 1056 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 PMS1P54277 932 aaKnown RBP11.92□□□□□ -0.5
CLCF1-202ENST00000533438 CRY1Q16526 586 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 HSF5Q4G112 596 aaPredicted RBP11.92□□□□□ -0.5
CLCF1-202ENST00000533438 CBWD6Q4V339 395 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 ZNF394Q53GI3 561 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 PPM1JQ5JR12 505 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 CBWD3Q5JTY5 395 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 CBWD5Q5RIA9 395 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 KLHDC10Q6PID8 442 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 TMEM92Q6UXU6 159 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 ZNF276Q8N554 614 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 IL17RCQ8NAC3 791 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 SLC4A11Q8NBS3 891 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 TSTD1Q8NFU3 115 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 JAKMIP2Q96AA8 810 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 CNOT6LQ96LI5 555 aaKnown RBP11.92□□□□□ -0.5
CLCF1-202ENST00000533438 DUSP16Q9BY84 665 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 FAM124BQ9H5Z6 455 aaPredicted RBP11.92□□□□□ -0.5
CLCF1-202ENST00000533438 NMUR1Q9HB89 426 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 ARHGEF4Q9NR80 690 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 CISHQ9NSE2 258 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.92□□□□□ -0.5
CLCF1-202ENST00000533438 COQ4Q9Y3A0 265 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 PCDHGA5Q9Y5G8 931 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 USP3Q9Y6I4 520 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 SDK1Q7Z5N4 2213 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 LAMA1P25391 3075 aa11.92□□□□□ -0.5
CLCF1-202ENST00000533438 FRYQ5TBA9 3013 aa11.91□□□□□ -0.5
CLCF1-202ENST00000533438 A0A1W2PQH9 124 aa11.91□□□□□ -0.5
CLCF1-202ENST00000533438 SGK1O00141 431 aa11.91□□□□□ -0.5
CLCF1-202ENST00000533438 DCLK1O15075 740 aa11.91□□□□□ -0.5
CLCF1-202ENST00000533438 STX10O60499 249 aa11.91□□□□□ -0.5
CLCF1-202ENST00000533438 SMC2O95347 1197 aa11.91□□□□□ -0.5
CLCF1-202ENST00000533438 IRF1P10914 325 aa11.91□□□□□ -0.5
CLCF1-202ENST00000533438 HNRNPLP14866 589 aaKnown RBP eCLIP11.91□□□□□ -0.5
CLCF1-202ENST00000533438 TIE1P35590 1138 aa11.91□□□□□ -0.5
CLCF1-202ENST00000533438 TNFRSF4P43489 277 aa11.91□□□□□ -0.5
CLCF1-202ENST00000533438 RAD23BP54727 409 aa11.91□□□□□ -0.5
CLCF1-202ENST00000533438 FKBP3Q00688 224 aaKnown RBP11.91□□□□□ -0.5
CLCF1-202ENST00000533438 KDSRQ06136 332 aa11.91□□□□□ -0.5
CLCF1-202ENST00000533438 SF3A2Q15428 464 aaKnown RBP11.91□□□□□ -0.5
CLCF1-202ENST00000533438 CCDC6Q16204 474 aa11.91□□□□□ -0.5
CLCF1-202ENST00000533438 EMC10Q5UCC4 262 aa11.91□□□□□ -0.5
CLCF1-202ENST00000533438 ANKRD40Q6AI12 368 aa11.91□□□□□ -0.5
CLCF1-202ENST00000533438 CCDC186Q7Z3E2 898 aa11.91□□□□□ -0.5
CLCF1-202ENST00000533438 SCD5Q86SK9 330 aa11.91□□□□□ -0.5
CLCF1-202ENST00000533438 TMEM25Q86YD3 366 aa11.91□□□□□ -0.5
CLCF1-202ENST00000533438 ABCA7Q8IZY2 2146 aa11.91□□□□□ -0.5
CLCF1-202ENST00000533438 TTC39CQ8N584 583 aa11.91□□□□□ -0.5
CLCF1-202ENST00000533438 CCDC33Q8N5R6 958 aa11.91□□□□□ -0.5
CLCF1-202ENST00000533438 ALLCQ8N6M5 410 aa11.91□□□□□ -0.5
CLCF1-202ENST00000533438 MDGA1Q8NFP4 955 aa11.91□□□□□ -0.5
CLCF1-202ENST00000533438 OLIG1Q8TAK6 271 aa11.91□□□□□ -0.5
CLCF1-202ENST00000533438 ERCC4Q92889 916 aaPredicted RBP11.91□□□□□ -0.5
CLCF1-202ENST00000533438 TATDN2Q93075 761 aa11.91□□□□□ -0.5
CLCF1-202ENST00000533438 SMARCE1Q969G3 411 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms