RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 TFB1MQ8WVM0 346 aaKnown RBP14.64□□□□□ -0.07
PCF11-204ENST00000530660 GPR101Q96P66 508 aaPredicted RBP14.64□□□□□ -0.07
PCF11-204ENST00000530660 DHRS4Q9BTZ2 278 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 SLC13A1Q9BZW2 595 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 TMEM117Q9H0C3 514 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 ACSS3Q9H6R3 686 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 NOCTQ9UK39 431 aaKnown RBP14.64□□□□□ -0.07
PCF11-204ENST00000530660 C7orf72A4D263 438 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 NOTOA8MTQ0 251 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 PI4K2BG5E9Z4 385 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 ATP2A1O14983 1001 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 FAM155BO75949 473 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 EIF2AK2P19525 551 aaKnown RBP14.64□□□□□ -0.07
PCF11-204ENST00000530660 TRPC1P48995 793 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 OTUD4Q01804 1114 aaKnown RBP14.64□□□□□ -0.07
PCF11-204ENST00000530660 TRIM16LQ309B1 348 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 TIGD2Q4W5G0 525 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 RHPN2Q8IUC4 686 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 CADM3Q8N126 398 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 TANKQ92844 425 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 WNK4Q96J92 1243 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 CDH19Q9H159 772 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.64□□□□□ -0.07
PCF11-204ENST00000530660 PCDHGA3Q9Y5H0 932 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 GIPC1O14908 333 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 IL1BP01584 269 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 CD1EP15812 388 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 CCT8P50990 548 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 HSD17B4P51659 736 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 FMO1Q01740 532 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 NSUN2Q08J23 767 aaKnown RBP eCLIP14.64□□□□□ -0.07
PCF11-204ENST00000530660 LRP8Q14114 963 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 E2F2Q14209 437 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 ERFEQ4G0M1 354 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 ANKRD22Q5VYY1 191 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 SETD3Q86TU7 594 aaPredicted RBP14.64□□□□□ -0.07
PCF11-204ENST00000530660 CHERPQ8IWX8 916 aaKnown RBP14.64□□□□□ -0.07
PCF11-204ENST00000530660 FBXO36Q8NEA4 188 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 HERC2P3Q9BVR0 1158 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 RIOX1Q9H6W3 641 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 C10orf88Q9H8K7 445 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 XAB2Q9HCS7 855 aaKnown RBP14.64□□□□□ -0.07
PCF11-204ENST00000530660 PPME1Q9Y570 386 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 SCN7AQ01118 1682 aa14.64□□□□□ -0.07
PCF11-204ENST00000530660 COPEO14579 308 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 KLHL41O60662 606 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 CDK8P49336 464 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 STAT2P52630 851 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 MAPK10P53779 464 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 PARP10Q53GL7 1025 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 RNASEH2BQ5TBB1 312 aaKnown RBP14.63□□□□□ -0.07
PCF11-204ENST00000530660 RNF148Q8N7C7 305 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 GCOM2Q9BZD3 368 aaPredicted RBP14.63□□□□□ -0.07
PCF11-204ENST00000530660 OLAHQ9NV23 265 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 KLF11O14901 512 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 LYPLA1O75608 230 aaPredicted RBP14.63□□□□□ -0.07
PCF11-204ENST00000530660 IREB2P48200 963 aaKnown RBP14.63□□□□□ -0.07
PCF11-204ENST00000530660 SCNN1DP51172 638 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 MRPS9P82933 396 aaKnown RBP14.63□□□□□ -0.07
PCF11-204ENST00000530660 GRIK5Q16478 980 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 EPC2Q52LR7 807 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 SH2D5Q6ZV89 423 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 NLRP4Q96MN2 994 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 CTRCQ99895 268 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 NAA50Q9GZZ1 169 aaKnown RBP14.63□□□□□ -0.07
PCF11-204ENST00000530660 HIPK3Q9H422 1215 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 A0A0B4J269 797 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 TMEM114B3SHH9 223 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 H3BNH8 94 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 PLOD2O00469 737 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 GZMAP12544 262 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 EIF6P56537 245 aaKnown RBP14.63□□□□□ -0.07
PCF11-204ENST00000530660 EIF3EP60228 445 aaKnown RBP14.63□□□□□ -0.07
PCF11-204ENST00000530660 TUBB3Q13509 450 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 TEX44Q53QW1 395 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 INTS5Q6P9B9 1019 aaKnown RBP14.63□□□□□ -0.07
PCF11-204ENST00000530660 CATSPER3Q86XQ3 398 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 NUDCD3Q8IVD9 361 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 PALM2Q8IXS6 379 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 ANKK1Q8NFD2 765 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 DCPSQ96C86 337 aaKnown RBP14.63□□□□□ -0.07
PCF11-204ENST00000530660 PPCSQ9HAB8 311 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 MYRFQ9Y2G1 1151 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 SNX9Q9Y5X1 595 aa14.63□□□□□ -0.07
PCF11-204ENST00000530660 ARHGEF37A1IGU5 675 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 TNFRSF10AO00220 468 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 SLITRK3O94933 977 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 P4HA1P13674 534 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 TAS2R40P59535 323 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 MORF4L2Q15014 288 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 BBS9Q3SYG4 887 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 ATP13A4Q4VNC1 1196 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 AARS2Q5JTZ9 985 aaKnown RBP14.62□□□□□ -0.07
PCF11-204ENST00000530660 GPR107Q5VW38 600 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 LYSMD3Q7Z3D4 306 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 PHTF2Q8N3S3 785 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 ADCY4Q8NFM4 1077 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 SEMA6AQ9H2E6 1030 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 PARVBQ9HBI1 364 aa14.62□□□□□ -0.07
PCF11-204ENST00000530660 ERGIC3Q9Y282 383 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms