RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 ZNF197O14709 1029 aa11.99□□□□□ -0.49
CAPN1-217ENST00000529133 ABL1P00519 1130 aa11.99□□□□□ -0.49
CAPN1-217ENST00000529133 FSHRP23945 695 aa11.99□□□□□ -0.49
CAPN1-217ENST00000529133 VAV2P52735 878 aa11.99□□□□□ -0.49
CAPN1-217ENST00000529133 YWHAZP63104 245 aaKnown RBP11.99□□□□□ -0.49
CAPN1-217ENST00000529133 KRT83P78385 493 aa11.99□□□□□ -0.49
CAPN1-217ENST00000529133 SMAD4Q13485 552 aaKnown RBP11.99□□□□□ -0.49
CAPN1-217ENST00000529133 MAMLD1Q13495 774 aa11.99□□□□□ -0.49
CAPN1-217ENST00000529133 STXBP5Q5T5C0 1151 aa11.99□□□□□ -0.49
CAPN1-217ENST00000529133 BTBD8Q5XKL5 378 aa11.99□□□□□ -0.49
CAPN1-217ENST00000529133 TRNP1Q6NT89 227 aa11.99□□□□□ -0.49
CAPN1-217ENST00000529133 BEND5Q7L4P6 421 aa11.99□□□□□ -0.49
CAPN1-217ENST00000529133 DEFB106AQ8N104 65 aa11.99□□□□□ -0.49
CAPN1-217ENST00000529133 EMC1Q8N766 993 aa11.99□□□□□ -0.49
CAPN1-217ENST00000529133 JOSD2Q8TAC2 188 aa11.99□□□□□ -0.49
CAPN1-217ENST00000529133 ING5Q8WYH8 240 aa11.99□□□□□ -0.49
CAPN1-217ENST00000529133 SUSD6Q92537 303 aa11.99□□□□□ -0.49
CAPN1-217ENST00000529133 EDEM1Q92611 657 aa11.99□□□□□ -0.49
CAPN1-217ENST00000529133 MRPS31Q92665 395 aaKnown RBP11.99□□□□□ -0.49
CAPN1-217ENST00000529133 HLA-CQ95604 372 aa11.99□□□□□ -0.49
CAPN1-217ENST00000529133 MCEEQ96PE7 176 aa11.99□□□□□ -0.49
CAPN1-217ENST00000529133 TRIM62Q9BVG3 475 aa11.99□□□□□ -0.49
CAPN1-217ENST00000529133 SELENOOQ9BVL4 669 aa11.99□□□□□ -0.49
CAPN1-217ENST00000529133 CCSER2Q9H7U1 834 aa11.99□□□□□ -0.49
CAPN1-217ENST00000529133 POPDC2Q9HBU9 364 aa11.99□□□□□ -0.49
CAPN1-217ENST00000529133 PARVAQ9NVD7 372 aa11.99□□□□□ -0.49
CAPN1-217ENST00000529133 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.99□□□□□ -0.49
CAPN1-217ENST00000529133 SCINQ9Y6U3 715 aa11.99□□□□□ -0.49
CAPN1-217ENST00000529133 GREB1Q4ZG55 1949 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 A0A0U1RQJ8 604 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 C2orf78A6NCI8 922 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 TLR5O60602 858 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 OAS1P00973 400 aaKnown RBP11.98□□□□□ -0.49
CAPN1-217ENST00000529133 RALAP11233 206 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 KRT3P12035 628 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 RARGP13631 454 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 FLT3P36888 993 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 TUBP50607 506 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 RNASE9P60153 205 aaKnown RBP11.98□□□□□ -0.49
CAPN1-217ENST00000529133 RPL7AP62424 266 aaKnown RBP11.98□□□□□ -0.49
CAPN1-217ENST00000529133 ARHGAP15Q53QZ3 475 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 HECTD3Q5T447 861 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 GPR158Q5T848 1215 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 SYPL2Q5VXT5 272 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 TXNDC8Q6A555 127 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 MSANTD2Q6P1R3 559 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 GET4Q7L5D6 327 aaPredicted RBP11.98□□□□□ -0.49
CAPN1-217ENST00000529133 ARCQ7LC44 396 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 KIAA1328Q86T90 577 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 ZNF276Q8N554 614 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 ATRIPQ8WXE1 791 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 RFFLQ8WZ73 363 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 NECTIN4Q96NY8 510 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 NUP85Q9BW27 656 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 POMKQ9H5K3 350 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 TASP1Q9H6P5 420 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 TRPC7Q9HCX4 862 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 MRPL47Q9HD33 250 aaKnown RBP11.98□□□□□ -0.49
CAPN1-217ENST00000529133 ABCC13Q9NSE7 274 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 NUDT5Q9UKK9 219 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 COG5Q9UP83 839 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 NAALADL1Q9UQQ1 740 aa11.98□□□□□ -0.49
CAPN1-217ENST00000529133 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.98□□□□□ -0.49
CAPN1-217ENST00000529133 MYO16Q9Y6X6 1858 aa11.97□□□□□ -0.49
CAPN1-217ENST00000529133 TMEM191CA6NGB0 347 aa11.97□□□□□ -0.49
CAPN1-217ENST00000529133 C2CD4BA6NLJ0 364 aa11.97□□□□□ -0.49
CAPN1-217ENST00000529133 DPYSL4O14531 572 aa11.97□□□□□ -0.49
CAPN1-217ENST00000529133 CAPN9O14815 690 aa11.97□□□□□ -0.49
CAPN1-217ENST00000529133 MDM4O15151 490 aa11.97□□□□□ -0.49
CAPN1-217ENST00000529133 PJA2O43164 708 aa11.97□□□□□ -0.49
CAPN1-217ENST00000529133 COCHO43405 550 aa11.97□□□□□ -0.49
CAPN1-217ENST00000529133 MBTPS2O43462 519 aa11.97□□□□□ -0.49
CAPN1-217ENST00000529133 OLFM2O95897 454 aa11.97□□□□□ -0.49
CAPN1-217ENST00000529133 CCDC175P0C221 793 aa11.97□□□□□ -0.49
CAPN1-217ENST00000529133 NCAM1P13591 858 aa11.97□□□□□ -0.49
CAPN1-217ENST00000529133 DDX6P26196 483 aaKnown RBP eCLIP11.97□□□□□ -0.49
CAPN1-217ENST00000529133 RFC1P35251 1148 aaPredicted RBP11.97□□□□□ -0.49
CAPN1-217ENST00000529133 MATKP42679 507 aa11.97□□□□□ -0.49
CAPN1-217ENST00000529133 PITX1P78337 314 aaPredicted RBP11.97□□□□□ -0.49
CAPN1-217ENST00000529133 OGDHQ02218 1023 aa11.97□□□□□ -0.49
CAPN1-217ENST00000529133 CBX2Q14781 532 aaPredicted RBP11.97□□□□□ -0.49
CAPN1-217ENST00000529133 TCEAL1Q15170 157 aa11.97□□□□□ -0.49
CAPN1-217ENST00000529133 LEXMQ3ZCV2 418 aa11.97□□□□□ -0.49
CAPN1-217ENST00000529133 DCAF6Q58WW2 860 aa11.97□□□□□ -0.49
CAPN1-217ENST00000529133 C10orf120Q5SQS8 335 aa11.97□□□□□ -0.49
CAPN1-217ENST00000529133 OTUD1Q5VV17 481 aaPredicted RBP11.97□□□□□ -0.49
CAPN1-217ENST00000529133 DCUN1D2Q6PH85 259 aa11.97□□□□□ -0.49
CAPN1-217ENST00000529133 POTEHQ6S545 545 aa11.97□□□□□ -0.49
CAPN1-217ENST00000529133 RSRC2Q7L4I2 434 aaKnown RBP11.97□□□□□ -0.49
CAPN1-217ENST00000529133 NPAS3Q8IXF0 933 aa11.97□□□□□ -0.49
CAPN1-217ENST00000529133 MAB21L3Q8N8X9 362 aa11.97□□□□□ -0.49
CAPN1-217ENST00000529133 DQX1Q8TE96 717 aaKnown RBP11.97□□□□□ -0.49
CAPN1-217ENST00000529133 RNF139Q8WU17 664 aa11.97□□□□□ -0.49
CAPN1-217ENST00000529133 RXFP2Q8WXD0 754 aa11.97□□□□□ -0.49
CAPN1-217ENST00000529133 ZSWIM3Q96MP5 696 aa11.97□□□□□ -0.49
CAPN1-217ENST00000529133 SLC22A12Q96S37 553 aa11.97□□□□□ -0.49
CAPN1-217ENST00000529133 CDK5RAP1Q96SZ6 601 aaKnown RBP11.97□□□□□ -0.49
CAPN1-217ENST00000529133 DDX23Q9BUQ8 820 aaKnown RBP11.97□□□□□ -0.49
CAPN1-217ENST00000529133 SLC46A2Q9BY10 475 aa11.97□□□□□ -0.49
CAPN1-217ENST00000529133 TRIM7Q9C029 511 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms