RNA–Protein interactions for RNA: ENST00000528494.5

ATG13-211, Transcript of autophagy related 13, humanhuman

TSL 1 (best) BASIC

Gene ATG13, Length 2,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-211ENST00000528494 RAB6CQ53S08 254 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 KCNT1Q5JUK3 1230 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 ANKRD20A2Q5SQ80 823 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 ANKRD20A1Q5TYW2 823 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 ANKRD20A3Q5VUR7 823 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 LRIG3Q6UXM1 1119 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 ABI1Q8IZP0 508 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 TEKT4Q8WW24 435 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 NDRG1Q92597 394 aaKnown RBP13.34□□□□□ -0.27
ATG13-211ENST00000528494 SEPT8Q92599 483 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 MCRS1Q96EZ8 462 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 ANKRD27Q96NW4 1050 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 SYT15Q9BQS2 421 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 RAB6CQ9H0N0 254 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 ZWILCHQ9H900 591 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 PCSK1NQ9UHG2 260 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 PAPSS1O43252 624 aaPredicted RBP13.34□□□□□ -0.27
ATG13-211ENST00000528494 ODC1P11926 461 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 DRD4P21917 467 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 FLT3P36888 993 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 LHX1P48742 406 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 CCNG1P51959 295 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 BCAT1P54687 386 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 BCAR1P56945 870 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 PPP2R2AP63151 447 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 PPARDQ03181 441 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 TAP1Q03518 808 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 PIGHQ14442 188 aaPredicted RBP13.34□□□□□ -0.27
ATG13-211ENST00000528494 TRADDQ15628 312 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 SMYD5Q6GMV2 418 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 PAQR9Q6ZVX9 377 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 CTU1Q7Z7A3 348 aaKnown RBP13.34□□□□□ -0.27
ATG13-211ENST00000528494 ARFGAP1Q8N6T3 406 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 URGCPQ8TCY9 931 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 FAM193BQ96PV7 902 aaPredicted RBP13.34□□□□□ -0.27
ATG13-211ENST00000528494 PLEKHG4BQ96PX9 1271 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 SLC4A5Q9BY07 1137 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 RHOBTB2Q9BYZ6 727 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 TTC7AQ9ULT0 858 aaPredicted RBP13.34□□□□□ -0.27
ATG13-211ENST00000528494 PCDHGA4Q9Y5G9 962 aa13.34□□□□□ -0.27
ATG13-211ENST00000528494 ZSCAN9O15535 394 aaPredicted RBP13.33□□□□□ -0.28
ATG13-211ENST00000528494 UPP2O95045 317 aa13.33□□□□□ -0.28
ATG13-211ENST00000528494 PDGFRAP16234 1089 aa13.33□□□□□ -0.28
ATG13-211ENST00000528494 MAP3K7CLP57077 242 aa13.33□□□□□ -0.28
ATG13-211ENST00000528494 ATP11AP98196 1134 aa13.33□□□□□ -0.28
ATG13-211ENST00000528494 GUCY2DQ02846 1103 aa13.33□□□□□ -0.28
ATG13-211ENST00000528494 C15orf59Q2T9L4 293 aaPredicted RBP13.33□□□□□ -0.28
ATG13-211ENST00000528494 NUGGCQ68CJ6 796 aa13.33□□□□□ -0.28
ATG13-211ENST00000528494 TRNP1Q6NT89 227 aa13.33□□□□□ -0.28
ATG13-211ENST00000528494 DCLRE1AQ6PJP8 1040 aa13.33□□□□□ -0.28
ATG13-211ENST00000528494 ANKRD33Q7Z3H0 272 aa13.33□□□□□ -0.28
ATG13-211ENST00000528494 ANKS1BQ7Z6G8 1248 aa13.33□□□□□ -0.28
ATG13-211ENST00000528494 TMEM110Q86TL2 294 aa13.33□□□□□ -0.28
ATG13-211ENST00000528494 SLC13A5Q86YT5 568 aaPredicted RBP13.33□□□□□ -0.28
ATG13-211ENST00000528494 TMEM86AQ8N2M4 240 aa13.33□□□□□ -0.28
ATG13-211ENST00000528494 RSPH1Q8WYR4 309 aa13.33□□□□□ -0.28
ATG13-211ENST00000528494 PCED1BQ96HM7 432 aa13.33□□□□□ -0.28
ATG13-211ENST00000528494 NAF1Q96HR8 494 aaKnown RBP13.33□□□□□ -0.28
ATG13-211ENST00000528494 CFAP57Q96MR6 1250 aa13.33□□□□□ -0.28
ATG13-211ENST00000528494 TMEM209Q96SK2 561 aa13.33□□□□□ -0.28
ATG13-211ENST00000528494 KCNK16Q96T55 309 aa13.33□□□□□ -0.28
ATG13-211ENST00000528494 NAP1L3Q99457 506 aaPredicted RBP13.33□□□□□ -0.28
ATG13-211ENST00000528494 HERPUD2Q9BSE4 406 aa13.33□□□□□ -0.28
ATG13-211ENST00000528494 SEZ6LQ9BYH1 1024 aa13.33□□□□□ -0.28
ATG13-211ENST00000528494 DNAI2Q9GZS0 605 aa13.33□□□□□ -0.28
ATG13-211ENST00000528494 CRISPLD2Q9H0B8 497 aa13.33□□□□□ -0.28
ATG13-211ENST00000528494 TMEM161AQ9NX61 479 aa13.33□□□□□ -0.28
ATG13-211ENST00000528494 LRFN2Q9ULH4 789 aa13.33□□□□□ -0.28
ATG13-211ENST00000528494 GOLGA6L10A0A0M3HER8 536 aa13.32□□□□□ -0.28
ATG13-211ENST00000528494 HEXIM1O94992 359 aaKnown RBP13.32□□□□□ -0.28
ATG13-211ENST00000528494 ATP2A2P16615 1042 aaKnown RBP13.32□□□□□ -0.28
ATG13-211ENST00000528494 PBX3P40426 434 aa13.32□□□□□ -0.28
ATG13-211ENST00000528494 TAF11Q15544 211 aa13.32□□□□□ -0.28
ATG13-211ENST00000528494 KAZNQ674X7 775 aa13.32□□□□□ -0.28
ATG13-211ENST00000528494 OLFML1Q6UWY5 402 aa13.32□□□□□ -0.28
ATG13-211ENST00000528494 PIGZQ86VD9 579 aa13.32□□□□□ -0.28
ATG13-211ENST00000528494 RXFP2Q8WXD0 754 aa13.32□□□□□ -0.28
ATG13-211ENST00000528494 PAWRQ96IZ0 340 aaKnown RBP13.32□□□□□ -0.28
ATG13-211ENST00000528494 HNRNPABQ99729 332 aaKnown RBP13.32□□□□□ -0.28
ATG13-211ENST00000528494 FAM118BQ9BPY3 351 aa13.32□□□□□ -0.28
ATG13-211ENST00000528494 RTP3Q9BQQ7 232 aa13.32□□□□□ -0.28
ATG13-211ENST00000528494 KRT82Q9NSB4 513 aa13.32□□□□□ -0.28
ATG13-211ENST00000528494 PSTPIP1O43586 416 aa13.32□□□□□ -0.28
ATG13-211ENST00000528494 LRCH4O75427 683 aa13.32□□□□□ -0.28
ATG13-211ENST00000528494 RARAP10276 462 aa13.32□□□□□ -0.28
ATG13-211ENST00000528494 RALAP11233 206 aa13.32□□□□□ -0.28
ATG13-211ENST00000528494 NQO1P15559 274 aaKnown RBP13.32□□□□□ -0.28
ATG13-211ENST00000528494 MAN1A1P33908 653 aa13.32□□□□□ -0.28
ATG13-211ENST00000528494 NDUFV1P49821 464 aa13.32□□□□□ -0.28
ATG13-211ENST00000528494 CACNA2D1P54289 1103 aa13.32□□□□□ -0.28
ATG13-211ENST00000528494 SLC6A3Q01959 620 aa13.32□□□□□ -0.28
ATG13-211ENST00000528494 FBXO46Q6PJ61 603 aaPredicted RBP13.32□□□□□ -0.28
ATG13-211ENST00000528494 METTL23Q86XA0 190 aa13.32□□□□□ -0.28
ATG13-211ENST00000528494 COLGALT2Q8IYK4 626 aa13.32□□□□□ -0.28
ATG13-211ENST00000528494 CHMP6Q96FZ7 201 aa13.32□□□□□ -0.28
ATG13-211ENST00000528494 DUSP16Q9BY84 665 aa13.32□□□□□ -0.28
ATG13-211ENST00000528494 TMEM39AQ9NV64 488 aa13.32□□□□□ -0.28
ATG13-211ENST00000528494 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.31□□□□□ -0.28
ATG13-211ENST00000528494 TTI1O43156 1089 aa13.31□□□□□ -0.28
ATG13-211ENST00000528494 KRT10P13645 584 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms