RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 ADH1CP00326 375 aa12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 CYP17A1P05093 508 aa12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 TDGF1P13385 188 aa12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 HOXA6P31267 233 aa12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 EIF2DP41214 584 aaKnown RBP12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 MTIF2P46199 727 aaKnown RBP12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 TKTL1P51854 596 aa12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 MFAP3P55082 362 aa12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 MAN2A1Q16706 1144 aa12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 GAB4Q2WGN9 574 aa12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 TRIM65Q6PJ69 517 aa12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 GBP6Q6ZN66 633 aa12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 RBBP8NLQ8NC74 664 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 UBA3Q8TBC4 463 aa12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 GPT2Q8TD30 523 aa12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 SLC35F5Q8WV83 523 aa12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 ATRIPQ8WXE1 791 aa12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 TFAP2BQ92481 460 aa12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 LRRC4Q9HBW1 653 aa12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 FBRSL1Q9HCM7 1045 aaKnown RBP12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 UBE2TQ9NPD8 197 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 R4GN57 208 aa12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 KIAA1549LQ6ZVL6 1849 aa12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 A0A0A0MRY4 1105 aa12.72□□□□□ -0.37
TRAPPC4-209ENST00000528230 TULP2O00295 520 aa12.72□□□□□ -0.37
TRAPPC4-209ENST00000528230 GREM1O60565 184 aa12.72□□□□□ -0.37
TRAPPC4-209ENST00000528230 EGFP01133 1207 aa12.72□□□□□ -0.37
TRAPPC4-209ENST00000528230 LMNAP02545 664 aaKnown RBP12.72□□□□□ -0.37
TRAPPC4-209ENST00000528230 SLC9A1P19634 815 aa12.72□□□□□ -0.37
TRAPPC4-209ENST00000528230 OPRD1P41143 372 aa12.72□□□□□ -0.37
TRAPPC4-209ENST00000528230 YWHAGP61981 247 aaKnown RBP eCLIP12.72□□□□□ -0.37
TRAPPC4-209ENST00000528230 COG7P83436 770 aa12.72□□□□□ -0.37
TRAPPC4-209ENST00000528230 SATB1Q01826 763 aa12.72□□□□□ -0.37
TRAPPC4-209ENST00000528230 GAD2Q05329 585 aa12.72□□□□□ -0.37
TRAPPC4-209ENST00000528230 MEA1Q16626 185 aa12.72□□□□□ -0.37
TRAPPC4-209ENST00000528230 EXOC3L4Q17RC7 722 aa12.72□□□□□ -0.37
TRAPPC4-209ENST00000528230 C10orf120Q5SQS8 335 aa12.72□□□□□ -0.37
TRAPPC4-209ENST00000528230 TSSK4Q6SA08 328 aa12.72□□□□□ -0.37
TRAPPC4-209ENST00000528230 Q6ZS52 159 aa12.72□□□□□ -0.37
TRAPPC4-209ENST00000528230 ASCL5Q7RTU5 278 aa12.72□□□□□ -0.37
TRAPPC4-209ENST00000528230 ENOX1Q8TC92 643 aaKnown RBP12.72□□□□□ -0.37
TRAPPC4-209ENST00000528230 HSFY1Q96LI6 401 aa12.72□□□□□ -0.37
TRAPPC4-209ENST00000528230 ZSWIM1Q9BR11 485 aa12.72□□□□□ -0.37
TRAPPC4-209ENST00000528230 CRACR2AQ9BSW2 395 aa12.72□□□□□ -0.37
TRAPPC4-209ENST00000528230 CNGB3Q9NQW8 809 aa12.72□□□□□ -0.37
TRAPPC4-209ENST00000528230 LSM7Q9UK45 103 aaKnown RBP12.72□□□□□ -0.37
TRAPPC4-209ENST00000528230 ZNF510Q9Y2H8 683 aa12.72□□□□□ -0.37
TRAPPC4-209ENST00000528230 PIEZO1Q92508 2521 aa12.72□□□□□ -0.37
TRAPPC4-209ENST00000528230 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC4-209ENST00000528230 K7ESF4 209 aa12.71□□□□□ -0.37
TRAPPC4-209ENST00000528230 HOXC11O43248 304 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC4-209ENST00000528230 MED7O43513 233 aa12.71□□□□□ -0.37
TRAPPC4-209ENST00000528230 MBD3O95983 291 aa12.71□□□□□ -0.37
TRAPPC4-209ENST00000528230 ADH5P11766 374 aa12.71□□□□□ -0.37
TRAPPC4-209ENST00000528230 PON1P27169 355 aa12.71□□□□□ -0.37
TRAPPC4-209ENST00000528230 PREPLQ4J6C6 727 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC4-209ENST00000528230 VWA3BQ502W6 1294 aa12.71□□□□□ -0.37
TRAPPC4-209ENST00000528230 LY6G5CQ5SRR4 150 aa12.71□□□□□ -0.37
TRAPPC4-209ENST00000528230 BBS7Q8IWZ6 715 aa12.71□□□□□ -0.37
TRAPPC4-209ENST00000528230 IRGQQ8WZA9 623 aa12.71□□□□□ -0.37
TRAPPC4-209ENST00000528230 WBP2Q969T9 261 aa12.71□□□□□ -0.37
TRAPPC4-209ENST00000528230 PNKPQ96T60 521 aa12.71□□□□□ -0.37
TRAPPC4-209ENST00000528230 TUBGCP2Q9BSJ2 902 aa12.71□□□□□ -0.37
TRAPPC4-209ENST00000528230 ULBP1Q9BZM6 244 aa12.71□□□□□ -0.37
TRAPPC4-209ENST00000528230 DCLK3Q9C098 648 aa12.71□□□□□ -0.37
TRAPPC4-209ENST00000528230 NDST4Q9H3R1 872 aa12.71□□□□□ -0.37
TRAPPC4-209ENST00000528230 SPHK2Q9NRA0 654 aa12.71□□□□□ -0.37
TRAPPC4-209ENST00000528230 OLA1Q9NTK5 396 aaKnown RBP12.71□□□□□ -0.37
TRAPPC4-209ENST00000528230 APEX2Q9UBZ4 518 aa12.71□□□□□ -0.37
TRAPPC4-209ENST00000528230 NUDT5Q9UKK9 219 aa12.71□□□□□ -0.37
TRAPPC4-209ENST00000528230 STRIP2Q9ULQ0 834 aa12.71□□□□□ -0.37
TRAPPC4-209ENST00000528230 CCDC163A0A0D9SF12 145 aa12.7□□□□□ -0.38
TRAPPC4-209ENST00000528230 M0QYV0 167 aa12.7□□□□□ -0.38
TRAPPC4-209ENST00000528230 SCAMP3O14828 347 aaKnown RBP12.7□□□□□ -0.38
TRAPPC4-209ENST00000528230 RNF40O75150 1001 aa12.7□□□□□ -0.38
TRAPPC4-209ENST00000528230 STC2O76061 302 aa12.7□□□□□ -0.38
TRAPPC4-209ENST00000528230 IRF1P10914 325 aa12.7□□□□□ -0.38
TRAPPC4-209ENST00000528230 KRT5P13647 590 aa12.7□□□□□ -0.38
TRAPPC4-209ENST00000528230 BRD2P25440 801 aaKnown RBP12.7□□□□□ -0.38
TRAPPC4-209ENST00000528230 EEF1GP26641 437 aaKnown RBP12.7□□□□□ -0.38
TRAPPC4-209ENST00000528230 CNR2P34972 360 aa12.7□□□□□ -0.38
TRAPPC4-209ENST00000528230 RPL34P49207 117 aaKnown RBP12.7□□□□□ -0.38
TRAPPC4-209ENST00000528230 ADIGQ0VDE8 80 aa12.7□□□□□ -0.38
TRAPPC4-209ENST00000528230 MIIPQ5JXC2 388 aa12.7□□□□□ -0.38
TRAPPC4-209ENST00000528230 BTBD8Q5XKL5 378 aa12.7□□□□□ -0.38
TRAPPC4-209ENST00000528230 NAIF1Q69YI7 327 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC4-209ENST00000528230 PMF1Q6P1K2 205 aa12.7□□□□□ -0.38
TRAPPC4-209ENST00000528230 Q6ZNB5 142 aa12.7□□□□□ -0.38
TRAPPC4-209ENST00000528230 RSRC2Q7L4I2 434 aaKnown RBP12.7□□□□□ -0.38
TRAPPC4-209ENST00000528230 BHLHA9Q7RTU4 235 aa12.7□□□□□ -0.38
TRAPPC4-209ENST00000528230 SIX6OS1Q8N1H7 587 aa12.7□□□□□ -0.38
TRAPPC4-209ENST00000528230 CAMKK1Q8N5S9 505 aa12.7□□□□□ -0.38
TRAPPC4-209ENST00000528230 STK32AQ8WU08 396 aa12.7□□□□□ -0.38
TRAPPC4-209ENST00000528230 ZNF606Q8WXB4 792 aa12.7□□□□□ -0.38
TRAPPC4-209ENST00000528230 EZH1Q92800 747 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC4-209ENST00000528230 SECISBP2LQ93073 1101 aaKnown RBP12.7□□□□□ -0.38
TRAPPC4-209ENST00000528230 ABCC13Q9NSE7 274 aa12.7□□□□□ -0.38
TRAPPC4-209ENST00000528230 MARCH2Q9P0N8 246 aa12.7□□□□□ -0.38
TRAPPC4-209ENST00000528230 WDR35Q9P2L0 1181 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms