RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 BCAT1P54687 386 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 ZBED6P86452 979 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 PRKCQQ04759 706 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 TBX2Q13207 712 aaPredicted RBP12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 GRM2Q14416 872 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 CSRP2Q16527 193 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 IL31Q6EBC2 164 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 DENND1BQ6P3S1 775 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 LCLAT1Q6UWP7 414 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 VSTM1Q6UX27 236 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 PRR23BQ6ZRT6 265 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 DNAJB7Q7Z6W7 309 aaPredicted RBP12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 DRC7Q8IY82 874 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 SPC24Q8NBT2 197 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 ZMIZ2Q8NF64 920 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 UBA3Q8TBC4 463 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 ZNF606Q8WXB4 792 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 IQCDQ96DY2 449 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 LRRC3BQ96PB8 259 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 KCNK16Q96T55 309 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 EDEM3Q9BZQ6 932 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 HSFX1Q9UBD0 423 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 HESX1Q9UBX0 185 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 NOCTQ9UK39 431 aaKnown RBP12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 KIAA1257Q9ULG3 409 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 MAFFQ9ULX9 164 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 MAGED2Q9UNF1 606 aaPredicted RBP12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 LUC7L2Q9Y383 392 aaKnown RBP12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 F5P12259 2224 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 AKAP13Q12802 2813 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 HELZ2Q9BYK8 2649 aaKnown RBP12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 SDK1Q7Z5N4 2213 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 SLC38A8A6NNN8 435 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 TRIM66O15016 1216 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 MED7O43513 233 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 MMEP08473 750 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 POU2F2P09086 479 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 TPM1P09493 284 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 FERP16591 822 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 PTPN2P17706 415 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 GABRR2P28476 465 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 CDC25BP30305 580 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 KRT9P35527 623 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 TUFMP49411 452 aaKnown RBP12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 EPHB3P54753 998 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 ADKP55263 362 aaKnown RBP12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 BPIFB4P59827 614 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 RPL10AP62906 217 aaKnown RBP12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 PDE4CQ08493 712 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 BST2Q10589 180 aaKnown RBP12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 IFRD2Q12894 506 aaPredicted RBP12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 MTAPQ13126 283 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 STILQ15468 1287 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 CNGA2Q16280 664 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 PKDCCQ504Y2 493 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 SLC44A4Q53GD3 710 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 FAM78AQ5JUQ0 283 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 TANGO2Q6ICL3 276 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 CYP26C1Q6V0L0 522 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 PDZD4Q76G19 769 aaPredicted RBP12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 GPRIN1Q7Z2K8 1008 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 KDF1Q8NAX2 398 aaPredicted RBP12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 ANKRD52Q8NB46 1076 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 ZNF397Q8NF99 534 aaPredicted RBP12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 CLDN23Q96B33 292 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 SLC22A12Q96S37 553 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 DUSP16Q9BY84 665 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 FAM126AQ9BYI3 521 aaPredicted RBP12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 DPP7Q9UHL4 492 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 CDH7Q9ULB5 785 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 ITPR1Q14643 2758 aa12.17□□□□□ -0.46
CCDC90B-210ENST00000528149 HHLA1C9JL84 531 aa12.16□□□□□ -0.46
CCDC90B-210ENST00000528149 SCAMP3O14828 347 aaKnown RBP12.16□□□□□ -0.46
CCDC90B-210ENST00000528149 ZIC2O95409 532 aaPredicted RBP12.16□□□□□ -0.46
CCDC90B-210ENST00000528149 SETSIPP0DME0 302 aa12.16□□□□□ -0.46
CCDC90B-210ENST00000528149 SKILP12757 684 aa12.16□□□□□ -0.46
CCDC90B-210ENST00000528149 CHRNB2P17787 502 aa12.16□□□□□ -0.46
CCDC90B-210ENST00000528149 RGS7P49802 495 aa12.16□□□□□ -0.46
CCDC90B-210ENST00000528149 EPHA5P54756 1037 aa12.16□□□□□ -0.46
CCDC90B-210ENST00000528149 FMO1Q01740 532 aa12.16□□□□□ -0.46
CCDC90B-210ENST00000528149 GSE1Q14687 1217 aa12.16□□□□□ -0.46
CCDC90B-210ENST00000528149 VEPH1Q14D04 833 aa12.16□□□□□ -0.46
CCDC90B-210ENST00000528149 TDRD12Q587J7 1177 aaKnown RBP12.16□□□□□ -0.46
CCDC90B-210ENST00000528149 SMYD5Q6GMV2 418 aa12.16□□□□□ -0.46
CCDC90B-210ENST00000528149 IRF2BP2Q7Z5L9 587 aa12.16□□□□□ -0.46
CCDC90B-210ENST00000528149 ELMOD1Q8N336 334 aa12.16□□□□□ -0.46
CCDC90B-210ENST00000528149 CELF5Q8N6W0 485 aaKnown RBP12.16□□□□□ -0.46
CCDC90B-210ENST00000528149 C1orf131Q8NDD1 294 aaKnown RBP12.16□□□□□ -0.46
CCDC90B-210ENST00000528149 OLIG1Q8TAK6 271 aa12.16□□□□□ -0.46
CCDC90B-210ENST00000528149 PSMG2Q969U7 264 aa12.16□□□□□ -0.46
CCDC90B-210ENST00000528149 C8orf48Q96LL4 319 aa12.16□□□□□ -0.46
CCDC90B-210ENST00000528149 ZNF512Q96ME7 567 aaPredicted RBP12.16□□□□□ -0.46
CCDC90B-210ENST00000528149 CSNK1G1Q9HCP0 422 aa12.16□□□□□ -0.46
CCDC90B-210ENST00000528149 ASAH2Q9NR71 780 aa12.16□□□□□ -0.46
CCDC90B-210ENST00000528149 SEPT11Q9NVA2 429 aaKnown RBP12.16□□□□□ -0.46
CCDC90B-210ENST00000528149 AIPL1Q9NZN9 384 aa12.16□□□□□ -0.46
CCDC90B-210ENST00000528149 PCDHGC3Q9UN70 934 aa12.16□□□□□ -0.46
CCDC90B-210ENST00000528149 LOC400499M0QZD8 3231 aa12.16□□□□□ -0.46
CCDC90B-210ENST00000528149 DMXL2Q8TDJ6 3036 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms