RNA–Protein interactions for RNA: ENST00000525537.2

ATM-208, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-208ENST00000525537 GALNT4Q8N4A0 578 aa6.63□□□□□ -1.35
ATM-208ENST00000525537 STAMQ92783 540 aa6.63□□□□□ -1.35
ATM-208ENST00000525537 APOPT1Q96IL0 206 aa6.63□□□□□ -1.35
ATM-208ENST00000525537 PHACTR3Q96KR7 559 aa6.63□□□□□ -1.35
ATM-208ENST00000525537 RSF1Q96T23 1441 aaPredicted RBP6.63□□□□□ -1.35
ATM-208ENST00000525537 PAAF1Q9BRP4 392 aa6.63□□□□□ -1.35
ATM-208ENST00000525537 FUZQ9BT04 418 aa6.63□□□□□ -1.35
ATM-208ENST00000525537 MECRQ9BV79 373 aa6.63□□□□□ -1.35
ATM-208ENST00000525537 AP1M1Q9BXS5 423 aa6.63□□□□□ -1.35
ATM-208ENST00000525537 PDCL3Q9H2J4 239 aa6.63□□□□□ -1.35
ATM-208ENST00000525537 C12orf65Q9H3J6 166 aaKnown RBP6.63□□□□□ -1.35
ATM-208ENST00000525537 PLSCR4Q9NRQ2 329 aa6.63□□□□□ -1.35
ATM-208ENST00000525537 GXYLT2A0PJZ3 443 aa6.62□□□□□ -1.35
ATM-208ENST00000525537 H3BNC9 293 aa6.62□□□□□ -1.35
ATM-208ENST00000525537 AGPSO00116 658 aa6.62□□□□□ -1.35
ATM-208ENST00000525537 CSF1RP07333 972 aa6.62□□□□□ -1.35
ATM-208ENST00000525537 ACADMP11310 421 aa6.62□□□□□ -1.35
ATM-208ENST00000525537 AKR1B1P15121 316 aa6.62□□□□□ -1.35
ATM-208ENST00000525537 RNASE9P60153 205 aaKnown RBP6.62□□□□□ -1.35
ATM-208ENST00000525537 RPP30P78346 268 aaKnown RBP6.62□□□□□ -1.35
ATM-208ENST00000525537 CLCA4Q14CN2 919 aa6.62□□□□□ -1.35
ATM-208ENST00000525537 MFSD4BQ5TF39 518 aa6.62□□□□□ -1.35
ATM-208ENST00000525537 ARHGAP40Q5TG30 622 aa6.62□□□□□ -1.35
ATM-208ENST00000525537 SFRP4Q6FHJ7 346 aaPredicted RBP6.62□□□□□ -1.35
ATM-208ENST00000525537 ZNF483Q8TF39 744 aaPredicted RBP6.62□□□□□ -1.35
ATM-208ENST00000525537 TMEM171Q8WVE6 324 aa6.62□□□□□ -1.35
ATM-208ENST00000525537 ST8SIA2Q92186 375 aa6.62□□□□□ -1.35
ATM-208ENST00000525537 NSUN4Q96CB9 384 aaKnown RBP6.62□□□□□ -1.35
ATM-208ENST00000525537 MCRS1Q96EZ8 462 aa6.62□□□□□ -1.35
ATM-208ENST00000525537 ZBTB45Q96K62 511 aaPredicted RBP6.62□□□□□ -1.35
ATM-208ENST00000525537 TTC14Q96N46 770 aa6.62□□□□□ -1.35
ATM-208ENST00000525537 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.62□□□□□ -1.35
ATM-208ENST00000525537 HECAQ9UBI9 543 aaPredicted RBP6.62□□□□□ -1.35
ATM-208ENST00000525537 BAG5Q9UL15 447 aa6.62□□□□□ -1.35
ATM-208ENST00000525537 OAZ3Q9UMX2 235 aa6.62□□□□□ -1.35
ATM-208ENST00000525537 ZBTB1Q9Y2K1 713 aa6.62□□□□□ -1.35
ATM-208ENST00000525537 NEU2Q9Y3R4 380 aa6.62□□□□□ -1.35
ATM-208ENST00000525537 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.62□□□□□ -1.35
ATM-208ENST00000525537 FER1L4A9Z1Z3 1794 aa6.62□□□□□ -1.35
ATM-208ENST00000525537 SPATA31A3Q5VYP0 1347 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 SYNDIG1LA6NDD5 238 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 GUCY1B2O75343 617 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 SUN1O94901 812 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 RPN1P04843 607 aaKnown RBP6.61□□□□□ -1.35
ATM-208ENST00000525537 HSPA1AP0DMV8 641 aaKnown RBP6.61□□□□□ -1.35
ATM-208ENST00000525537 HSPA1BP0DMV9 641 aaKnown RBP6.61□□□□□ -1.35
ATM-208ENST00000525537 KCNA2P16389 499 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 GLDCP23378 1020 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 PSMA4P25789 261 aaKnown RBP6.61□□□□□ -1.35
ATM-208ENST00000525537 EPHA3P29320 983 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 PAFAH1B1P43034 410 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 TERF1P54274 439 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 DCTN1Q14203 1278 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 SEC23BQ15437 767 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 PKN1Q16512 942 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 PRICKLE4Q2TBC4 344 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 ZNF569Q5MCW4 686 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 LIPMQ5VYY2 423 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 RGS7BPQ6MZT1 257 aaPredicted RBP6.61□□□□□ -1.35
ATM-208ENST00000525537 SYT12Q8IV01 421 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 RHOT2Q8IXI1 618 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 FSTL5Q8N475 847 aaPredicted RBP6.61□□□□□ -1.35
ATM-208ENST00000525537 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.61□□□□□ -1.35
ATM-208ENST00000525537 ANKRD44Q8N8A2 993 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 NKAIN3Q8N8D7 197 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 FAM71DQ8N9W8 422 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 FSIP1Q8NA03 581 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 FBXO15Q8NCQ5 510 aaPredicted RBP6.61□□□□□ -1.35
ATM-208ENST00000525537 SLC22A17Q8WUG5 538 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 DPYSL5Q9BPU6 564 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 CCDC134Q9H6E4 229 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 PLEKHA2Q9HB19 425 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 TBC1D14Q9P2M4 693 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 HSFX1Q9UBD0 423 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 CNOT7Q9UIV1 285 aaKnown RBP6.61□□□□□ -1.35
ATM-208ENST00000525537 SLC27A6Q9Y2P4 619 aa6.61□□□□□ -1.35
ATM-208ENST00000525537 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.61□□□□□ -1.35
ATM-208ENST00000525537 LOC105369274A0A096LPK9 316 aa6.6□□□□□ -1.35
ATM-208ENST00000525537 LOC102723532A0A0G2JNH3 316 aa6.6□□□□□ -1.35
ATM-208ENST00000525537 MFAP3LO75121 409 aa6.6□□□□□ -1.35
ATM-208ENST00000525537 IPO13O94829 963 aaKnown RBP6.6□□□□□ -1.35
ATM-208ENST00000525537 MLYCDO95822 493 aa6.6□□□□□ -1.35
ATM-208ENST00000525537 CLEC3BP05452 202 aa6.6□□□□□ -1.35
ATM-208ENST00000525537 HLA-DOAP06340 250 aa6.6□□□□□ -1.35
ATM-208ENST00000525537 CR2P20023 1033 aa6.6□□□□□ -1.35
ATM-208ENST00000525537 ANXA11P50995 505 aaKnown RBP6.6□□□□□ -1.35
ATM-208ENST00000525537 CAMK1Q14012 370 aa6.6□□□□□ -1.35
ATM-208ENST00000525537 ACOX1Q15067 660 aa6.6□□□□□ -1.35
ATM-208ENST00000525537 CBWD5Q5RIA9 395 aa6.6□□□□□ -1.35
ATM-208ENST00000525537 C1QTNF12Q5T7M4 302 aa6.6□□□□□ -1.35
ATM-208ENST00000525537 METRNLQ641Q3 311 aa6.6□□□□□ -1.35
ATM-208ENST00000525537 INO80CQ6PI98 192 aaPredicted RBP6.6□□□□□ -1.35
ATM-208ENST00000525537 CLEC9AQ6UXN8 241 aa6.6□□□□□ -1.35
ATM-208ENST00000525537 PIK3AP1Q6ZUJ8 805 aa6.6□□□□□ -1.35
ATM-208ENST00000525537 CPLX4Q7Z7G2 160 aa6.6□□□□□ -1.35
ATM-208ENST00000525537 ZNF761Q86XN6 746 aaPredicted RBP6.6□□□□□ -1.35
ATM-208ENST00000525537 RPAP2Q8IXW5 612 aaPredicted RBP6.6□□□□□ -1.35
ATM-208ENST00000525537 DIS3L2Q8IYB7 885 aaKnown RBP6.6□□□□□ -1.35
ATM-208ENST00000525537 OR4N4Q8N0Y3 316 aa6.6□□□□□ -1.35
ATM-208ENST00000525537 ADSSL1Q8N142 457 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms