RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 PRPF18Q99633 342 aaKnown RBP13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 HERC5Q9UII4 1024 aaKnown RBP13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 INPP5FQ9Y2H2 1132 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 GOLGA8QA0A0J9YX86 632 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 GOLGA8OA6NCC3 632 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 GOLGA8NF8WBI6 632 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 LDHAP00338 332 aaKnown RBP13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 ICAM1P05362 532 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 DESP17661 470 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 HOXA10P31260 410 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 STIP1P31948 543 aaKnown RBP13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 ETV4P43268 484 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 DGKZQ13574 1117 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 BAATQ14032 418 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 N4BP2L1Q5TBK1 243 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 TTLL6Q8N841 843 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 THAP1Q9NVV9 213 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 USP18Q9UMW8 372 aa13.29□□□□□ -0.28
TRAPPC9-208ENST00000520857 APOC4-APOC2K7ER74 178 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 APOC2P02655 101 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 NPR1P16066 1061 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 PRKG1Q13976 671 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 EMC2Q15006 297 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 TRIML2Q8N7C3 387 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 PIWIL2Q8TC59 973 aaKnown RBP13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 FAM172AQ8WUF8 416 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 CMTM5Q96DZ9 223 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 C7orf26Q96N11 449 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 ANLNQ9NQW6 1124 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 CYP26B1Q9NR63 512 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 SEPT10Q9P0V9 454 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 AK5Q9Y6K8 562 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 M0QYV0 167 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 ZNF862O60290 1169 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 CRABP2P29373 138 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 TYK2P29597 1187 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 SERPINB5P36952 375 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 SLC1A6P48664 564 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 NUDT2P50583 147 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 CRADDP78560 199 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 TBCCQ15814 346 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 PDPK2PQ6A1A2 396 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 DPY19L2Q6NUT2 758 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 CDKL2Q92772 493 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 IFT43Q96FT9 208 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 FBXL18Q96ME1 805 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 WDR83Q9BRX9 315 aaKnown RBP13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 NIF3L1Q9GZT8 377 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 TMEM39BQ9GZU3 492 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 RSAD1Q9HA92 442 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 PNPOQ9NVS9 261 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 PAK5Q9P286 719 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 PDGFRAP16234 1089 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 RBL1P28749 1068 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 PTPN20Q4JDL3 420 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 TRMT10BQ6PF06 316 aaKnown RBP13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 ZNF276Q8N554 614 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 UBA3Q8TBC4 463 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 PGBD4Q96DM1 585 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 PDCD2LQ9BRP1 358 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 ZNF711Q9Y462 761 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 UBIAD1Q9Y5Z9 338 aa13.28□□□□□ -0.28
TRAPPC9-208ENST00000520857 H0YIN7 160 aa13.27□□□□□ -0.28
TRAPPC9-208ENST00000520857 ENTPD3O75355 529 aa13.27□□□□□ -0.28
TRAPPC9-208ENST00000520857 TNNC2P02585 160 aa13.27□□□□□ -0.28
TRAPPC9-208ENST00000520857 ENO3P13929 434 aaPredicted RBP13.27□□□□□ -0.28
TRAPPC9-208ENST00000520857 CDH8P55286 799 aa13.27□□□□□ -0.28
TRAPPC9-208ENST00000520857 YWHAEP62258 255 aaKnown RBP13.27□□□□□ -0.28
TRAPPC9-208ENST00000520857 MRPS22P82650 360 aaKnown RBP13.27□□□□□ -0.28
TRAPPC9-208ENST00000520857 PGM5Q15124 567 aa13.27□□□□□ -0.28
TRAPPC9-208ENST00000520857 RARS2Q5T160 578 aaKnown RBP13.27□□□□□ -0.28
TRAPPC9-208ENST00000520857 SAMD3Q8N6K7 520 aa13.27□□□□□ -0.28
TRAPPC9-208ENST00000520857 TFAP2BQ92481 460 aa13.27□□□□□ -0.28
TRAPPC9-208ENST00000520857 PHF12Q96QT6 1004 aa13.27□□□□□ -0.28
TRAPPC9-208ENST00000520857 CGRRF1Q99675 332 aa13.27□□□□□ -0.28
TRAPPC9-208ENST00000520857 MRPL1Q9BYD6 325 aaKnown RBP13.27□□□□□ -0.28
TRAPPC9-208ENST00000520857 ASNSD1Q9NWL6 643 aa13.27□□□□□ -0.28
TRAPPC9-208ENST00000520857 ADAMTS6Q9UKP5 1117 aa13.27□□□□□ -0.28
TRAPPC9-208ENST00000520857 ZNF541Q9H0D2 1346 aa13.27□□□□□ -0.28
TRAPPC9-208ENST00000520857 KIF13BQ9NQT8 1826 aa13.27□□□□□ -0.28
TRAPPC9-208ENST00000520857 BPGMP07738 259 aa13.27□□□□□ -0.29
TRAPPC9-208ENST00000520857 SLC18A2Q05940 514 aa13.27□□□□□ -0.29
TRAPPC9-208ENST00000520857 DBN1Q16643 649 aa13.27□□□□□ -0.29
TRAPPC9-208ENST00000520857 TBC1D25Q3MII6 688 aa13.27□□□□□ -0.29
TRAPPC9-208ENST00000520857 B3GNT9Q6UX72 402 aa13.27□□□□□ -0.29
TRAPPC9-208ENST00000520857 HEXIM2Q96MH2 286 aaKnown RBP13.27□□□□□ -0.29
TRAPPC9-208ENST00000520857 C17orf75Q9HAS0 396 aa13.27□□□□□ -0.29
TRAPPC9-208ENST00000520857 GPAMQ9HCL2 828 aa13.27□□□□□ -0.29
TRAPPC9-208ENST00000520857 ARHGEF4Q9NR80 690 aa13.27□□□□□ -0.29
TRAPPC9-208ENST00000520857 FETUBQ9UGM5 382 aa13.27□□□□□ -0.29
TRAPPC9-208ENST00000520857 MYOCOSA0A1B0GUC4 107 aa13.27□□□□□ -0.29
TRAPPC9-208ENST00000520857 XPO1O14980 1071 aaKnown RBP13.27□□□□□ -0.29
TRAPPC9-208ENST00000520857 APOEP02649 317 aa13.27□□□□□ -0.29
TRAPPC9-208ENST00000520857 NR3C2P08235 984 aa13.27□□□□□ -0.29
TRAPPC9-208ENST00000520857 CSH1P0DML2 217 aa13.27□□□□□ -0.29
TRAPPC9-208ENST00000520857 CSH2P0DML3 217 aa13.27□□□□□ -0.29
TRAPPC9-208ENST00000520857 TNFSF9P41273 254 aa13.27□□□□□ -0.29
TRAPPC9-208ENST00000520857 ITGA9Q13797 1035 aa13.27□□□□□ -0.29
TRAPPC9-208ENST00000520857 DUOXA2Q1HG44 320 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms