RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	GBP6	Q6ZN66	633 aa		25.41	■■□□□ 1.66
CNOT7-204	ENST00000518885	HTR3D	Q70Z44	454 aa		25.41	■■□□□ 1.66
CNOT7-204	ENST00000518885	RSRC2	Q7L4I2	434 aa	Known RBP	25.41	■■□□□ 1.66
CNOT7-204	ENST00000518885	RRAGA	Q7L523	313 aa		25.41	■■□□□ 1.66
CNOT7-204	ENST00000518885	TTC30A	Q86WT1	665 aa		25.41	■■□□□ 1.66
CNOT7-204	ENST00000518885	RBBP8NL	Q8NC74	664 aa	Predicted RBP	25.41	■■□□□ 1.66
CNOT7-204	ENST00000518885	KLF16	Q9BXK1	252 aa	Predicted RBP	25.41	■■□□□ 1.66
CNOT7-204	ENST00000518885	LMBRD1	Q9NUN5	540 aa		25.41	■■□□□ 1.66
CNOT7-204	ENST00000518885	RAB23	Q9ULC3	237 aa		25.41	■■□□□ 1.66
CNOT7-204	ENST00000518885	ZNF510	Q9Y2H8	683 aa		25.41	■■□□□ 1.66
CNOT7-204	ENST00000518885	VPS13A	Q96RL7	3174 aa		25.41	■■□□□ 1.66
CNOT7-204	ENST00000518885	CACNA1I	Q9P0X4	2223 aa		25.4	■■□□□ 1.66
CNOT7-204	ENST00000518885	GTPBP10	A4D1E9	387 aa	Known RBP	25.4	■■□□□ 1.66
CNOT7-204	ENST00000518885	CNGA2	Q16280	664 aa		25.4	■■□□□ 1.66
CNOT7-204	ENST00000518885	KCTD13	Q8WZ19	329 aa		25.4	■■□□□ 1.66
CNOT7-204	ENST00000518885	PNKP	Q96T60	521 aa		25.4	■■□□□ 1.66
CNOT7-204	ENST00000518885	DCLK3	Q9C098	648 aa		25.4	■■□□□ 1.66
CNOT7-204	ENST00000518885	NMUR1	Q9HB89	426 aa		25.4	■■□□□ 1.66
CNOT7-204	ENST00000518885	OLA1	Q9NTK5	396 aa	Known RBP	25.4	■■□□□ 1.66
CNOT7-204	ENST00000518885	LILRB5	O75023	590 aa		25.39	■■□□□ 1.66
CNOT7-204	ENST00000518885	TBX18	O95935	607 aa		25.39	■■□□□ 1.66
CNOT7-204	ENST00000518885	APOD	P05090	189 aa		25.39	■■□□□ 1.66
CNOT7-204	ENST00000518885	TDGF1	P13385	188 aa		25.39	■■□□□ 1.66
CNOT7-204	ENST00000518885	YWHAG	P61981	247 aa	Known RBP eCLIP	25.39	■■□□□ 1.66
CNOT7-204	ENST00000518885	PM20D1	Q6GTS8	502 aa		25.39	■■□□□ 1.66
CNOT7-204	ENST00000518885	RHBDF2	Q6PJF5	856 aa		25.39	■■□□□ 1.66
CNOT7-204	ENST00000518885	LONP2	Q86WA8	852 aa		25.39	■■□□□ 1.66
CNOT7-204	ENST00000518885	HINFP	Q9BQA5	517 aa		25.39	■■□□□ 1.66
CNOT7-204	ENST00000518885	EPC1	Q9H2F5	836 aa		25.39	■■□□□ 1.66
CNOT7-204	ENST00000518885	UBE2T	Q9NPD8	197 aa	Predicted RBP	25.39	■■□□□ 1.66
CNOT7-204	ENST00000518885	SPHK2	Q9NRA0	654 aa		25.39	■■□□□ 1.66
CNOT7-204	ENST00000518885	OSER1	Q9NX31	292 aa		25.39	■■□□□ 1.66
CNOT7-204	ENST00000518885	MED7	O43513	233 aa		25.38	■■□□□ 1.65
CNOT7-204	ENST00000518885	KRT5	P13647	590 aa		25.38	■■□□□ 1.65
CNOT7-204	ENST00000518885	PGF	P49763	221 aa		25.38	■■□□□ 1.65
CNOT7-204	ENST00000518885	EXOC3L4	Q17RC7	722 aa		25.38	■■□□□ 1.65
CNOT7-204	ENST00000518885	LY6G5C	Q5SRR4	150 aa		25.38	■■□□□ 1.65
CNOT7-204	ENST00000518885	SCD5	Q86SK9	330 aa		25.38	■■□□□ 1.65
CNOT7-204	ENST00000518885	MIB1	Q86YT6	1006 aa		25.38	■■□□□ 1.65
CNOT7-204	ENST00000518885	ARHGEF19	Q8IW93	802 aa		25.38	■■□□□ 1.65
CNOT7-204	ENST00000518885	BBS7	Q8IWZ6	715 aa		25.38	■■□□□ 1.65
CNOT7-204	ENST00000518885	CAMKK1	Q8N5S9	505 aa		25.38	■■□□□ 1.65
CNOT7-204	ENST00000518885	RUBCN	Q92622	972 aa		25.38	■■□□□ 1.65
CNOT7-204	ENST00000518885	GOLGA1	Q92805	767 aa		25.38	■■□□□ 1.65
CNOT7-204	ENST00000518885	FBRSL1	Q9HCM7	1045 aa	Known RBP	25.38	■■□□□ 1.65
CNOT7-204	ENST00000518885	CNGB3	Q9NQW8	809 aa		25.38	■■□□□ 1.65
CNOT7-204	ENST00000518885	WDR35	Q9P2L0	1181 aa		25.38	■■□□□ 1.65
CNOT7-204	ENST00000518885	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	25.38	■■□□□ 1.65
CNOT7-204	ENST00000518885		M0QYV0	167 aa		25.37	■■□□□ 1.65
CNOT7-204	ENST00000518885	SCAMP3	O14828	347 aa	Known RBP	25.37	■■□□□ 1.65
CNOT7-204	ENST00000518885	HOXC11	O43248	304 aa	Predicted RBP	25.37	■■□□□ 1.65
CNOT7-204	ENST00000518885	OPRD1	P41143	372 aa		25.37	■■□□□ 1.65
CNOT7-204	ENST00000518885	MAN2A1	Q16706	1144 aa		25.37	■■□□□ 1.65
CNOT7-204	ENST00000518885	DPCR1	Q3MIW9	517 aa		25.37	■■□□□ 1.65
CNOT7-204	ENST00000518885	SCML4	Q8N228	414 aa		25.37	■■□□□ 1.65
CNOT7-204	ENST00000518885	RPLP0P6	Q8NHW5	317 aa		25.37	■■□□□ 1.65
CNOT7-204	ENST00000518885	UBA3	Q8TBC4	463 aa		25.37	■■□□□ 1.65
CNOT7-204	ENST00000518885	RNF139	Q8WU17	664 aa		25.37	■■□□□ 1.65
CNOT7-204	ENST00000518885	ULBP1	Q9BZM6	244 aa		25.37	■■□□□ 1.65
CNOT7-204	ENST00000518885	RASAL2	Q9UJF2	1139 aa		25.37	■■□□□ 1.65
CNOT7-204	ENST00000518885	CCDC163	A0A0D9SF12	145 aa		25.36	■■□□□ 1.65
CNOT7-204	ENST00000518885		K7ESF4	209 aa		25.36	■■□□□ 1.65
CNOT7-204	ENST00000518885	GRIA2	P42262	883 aa		25.36	■■□□□ 1.65
CNOT7-204	ENST00000518885	ZNF132	P52740	706 aa		25.36	■■□□□ 1.65
CNOT7-204	ENST00000518885	ADIG	Q0VDE8	80 aa		25.36	■■□□□ 1.65
CNOT7-204	ENST00000518885	MEA1	Q16626	185 aa		25.36	■■□□□ 1.65
CNOT7-204	ENST00000518885	ANO4	Q32M45	955 aa		25.36	■■□□□ 1.65
CNOT7-204	ENST00000518885	TRIM65	Q6PJ69	517 aa		25.36	■■□□□ 1.65
CNOT7-204	ENST00000518885	SYT13	Q7L8C5	426 aa		25.36	■■□□□ 1.65
CNOT7-204	ENST00000518885	KAT5	Q92993	513 aa		25.36	■■□□□ 1.65
CNOT7-204	ENST00000518885	XPO6	Q96QU8	1125 aa	Known RBP	25.36	■■□□□ 1.65
CNOT7-204	ENST00000518885	ARHGEF4	Q9NR80	690 aa		25.36	■■□□□ 1.65
CNOT7-204	ENST00000518885	DEC1	Q9P2X7	70 aa		25.36	■■□□□ 1.65
CNOT7-204	ENST00000518885	NCDN	Q9UBB6	729 aa		25.36	■■□□□ 1.65
CNOT7-204	ENST00000518885	APEX2	Q9UBZ4	518 aa		25.36	■■□□□ 1.65
CNOT7-204	ENST00000518885	CNTN6	Q9UQ52	1028 aa		25.36	■■□□□ 1.65
CNOT7-204	ENST00000518885	MRPS21	P82921	87 aa	Known RBP	25.35	■■□□□ 1.65
CNOT7-204	ENST00000518885	EFEMP1	Q12805	493 aa		25.35	■■□□□ 1.65
CNOT7-204	ENST00000518885	HSF5	Q4G112	596 aa	Predicted RBP	25.35	■■□□□ 1.65
CNOT7-204	ENST00000518885	IRGQ	Q8WZA9	623 aa		25.35	■■□□□ 1.65
CNOT7-204	ENST00000518885	HSFY1	Q96LI6	401 aa		25.35	■■□□□ 1.65
CNOT7-204	ENST00000518885	CRACR2A	Q9BSW2	395 aa		25.35	■■□□□ 1.65
CNOT7-204	ENST00000518885	ABCC13	Q9NSE7	274 aa		25.35	■■□□□ 1.65
CNOT7-204	ENST00000518885	MARCH2	Q9P0N8	246 aa		25.35	■■□□□ 1.65
CNOT7-204	ENST00000518885	NUDT5	Q9UKK9	219 aa		25.35	■■□□□ 1.65
CNOT7-204	ENST00000518885	SMG5	Q9UPR3	1016 aa	Known RBP	25.35	■■□□□ 1.65
CNOT7-204	ENST00000518885	FANCM	Q8IYD8	2048 aa		25.35	■■□□□ 1.65
CNOT7-204	ENST00000518885	SART1	O43290	800 aa	Known RBP	25.34	■■□□□ 1.65
CNOT7-204	ENST00000518885	FBXO21	O94952	628 aa		25.34	■■□□□ 1.65
CNOT7-204	ENST00000518885	KAT7	O95251	611 aa		25.34	■■□□□ 1.65
CNOT7-204	ENST00000518885	MBD3	O95983	291 aa		25.34	■■□□□ 1.65
CNOT7-204	ENST00000518885	BRD2	P25440	801 aa	Known RBP	25.34	■■□□□ 1.65
CNOT7-204	ENST00000518885	CHKA	P35790	457 aa		25.34	■■□□□ 1.65
CNOT7-204	ENST00000518885	TNFRSF4	P43489	277 aa		25.34	■■□□□ 1.65
CNOT7-204	ENST00000518885	FNTB	P49356	437 aa		25.34	■■□□□ 1.65
CNOT7-204	ENST00000518885	PKDCC	Q504Y2	493 aa		25.34	■■□□□ 1.65
CNOT7-204	ENST00000518885	NAIF1	Q69YI7	327 aa	Predicted RBP	25.34	■■□□□ 1.65
CNOT7-204	ENST00000518885	WDR5B	Q86VZ2	330 aa		25.34	■■□□□ 1.65
CNOT7-204	ENST00000518885	SUMF1	Q8NBK3	374 aa		25.34	■■□□□ 1.65
CNOT7-204	ENST00000518885	SLC35F5	Q8WV83	523 aa		25.34	■■□□□ 1.65

Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms