RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 EPHA3P29320 983 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 CD6P30203 668 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 CCT4P50991 539 aaKnown RBP5.82□□□□□ -1.48
RFC1-216ENST00000514572 TIRAPP58753 221 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 RNASE9P60153 205 aaKnown RBP5.82□□□□□ -1.48
RFC1-216ENST00000514572 SF3A3Q12874 501 aaKnown RBP eCLIP5.82□□□□□ -1.48
RFC1-216ENST00000514572 ANKRD1Q15327 319 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 FAM90A2PQ658T7 463 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 Q6ZRM9 215 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 SYT13Q7L8C5 426 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 POLNQ7Z5Q5 900 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 METTL25Q8N6Q8 603 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 CCDC89Q8N998 374 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 SLC2A12Q8TD20 617 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 ATG4AQ8WYN0 398 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 GOLGA1Q92805 767 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 ZUFSPQ96AP4 578 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 HAPLN3Q96S86 360 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 TEX101Q9BY14 249 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 CHODLQ9H9P2 273 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 TRIM36Q9NQ86 728 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 TBX20Q9UMR3 447 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 ZFR2Q9UPR6 939 aaKnown RBP5.82□□□□□ -1.48
RFC1-216ENST00000514572 USP22Q9UPT9 525 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 RRP7AQ9Y3A4 280 aaKnown RBP5.82□□□□□ -1.48
RFC1-216ENST00000514572 DUSP10Q9Y6W6 482 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 CEP164Q9UPV0 1460 aa5.82□□□□□ -1.48
RFC1-216ENST00000514572 AHRRA9YTQ3 701 aa5.81□□□□□ -1.48
RFC1-216ENST00000514572 STX16-NPEPL1H3BU86 382 aa5.81□□□□□ -1.48
RFC1-216ENST00000514572 STX16O14662 325 aa5.81□□□□□ -1.48
RFC1-216ENST00000514572 CTIFO43310 598 aaKnown RBP5.81□□□□□ -1.48
RFC1-216ENST00000514572 TSPAN3O60637 253 aa5.81□□□□□ -1.48
RFC1-216ENST00000514572 USO1O60763 962 aaKnown RBP5.81□□□□□ -1.48
RFC1-216ENST00000514572 KRT38O76015 456 aa5.81□□□□□ -1.48
RFC1-216ENST00000514572 CSF1P09603 554 aa5.81□□□□□ -1.48
RFC1-216ENST00000514572 PRKAR1BP31321 381 aa5.81□□□□□ -1.48
RFC1-216ENST00000514572 ATXN1P54253 815 aaKnown RBP5.81□□□□□ -1.48
RFC1-216ENST00000514572 RPS7P62081 194 aaKnown RBP5.81□□□□□ -1.48
RFC1-216ENST00000514572 TUBB3Q13509 450 aa5.81□□□□□ -1.48
RFC1-216ENST00000514572 PDE1CQ14123 709 aaPredicted RBP5.81□□□□□ -1.48
RFC1-216ENST00000514572 DCTN1Q14203 1278 aa5.81□□□□□ -1.48
RFC1-216ENST00000514572 TOMM20Q15388 145 aa5.81□□□□□ -1.48
RFC1-216ENST00000514572 CYP2A13Q16696 494 aa5.81□□□□□ -1.48
RFC1-216ENST00000514572 CD300EQ496F6 205 aaPredicted RBP5.81□□□□□ -1.48
RFC1-216ENST00000514572 CTXN3Q4LDR2 81 aa5.81□□□□□ -1.48
RFC1-216ENST00000514572 ACAD10Q6JQN1 1059 aa5.81□□□□□ -1.48
RFC1-216ENST00000514572 Q6ZSN1 163 aa5.81□□□□□ -1.48
RFC1-216ENST00000514572 FASTKD5Q7L8L6 764 aaKnown RBP5.81□□□□□ -1.48
RFC1-216ENST00000514572 GALNT4Q8N4A0 578 aa5.81□□□□□ -1.48
RFC1-216ENST00000514572 TCP11L2Q8N4U5 519 aa5.81□□□□□ -1.48
RFC1-216ENST00000514572 POU5F2Q8N7G0 328 aa5.81□□□□□ -1.48
RFC1-216ENST00000514572 ADAMTS15Q8TE58 950 aa5.81□□□□□ -1.48
RFC1-216ENST00000514572 NACC2Q96BF6 587 aa5.81□□□□□ -1.48
RFC1-216ENST00000514572 ERP27Q96DN0 273 aa5.81□□□□□ -1.48
RFC1-216ENST00000514572 DCLRE1CQ96SD1 692 aaKnown RBP5.81□□□□□ -1.48
RFC1-216ENST00000514572 C17orf80Q9BSJ5 609 aa5.81□□□□□ -1.48
RFC1-216ENST00000514572 OLA1Q9NTK5 396 aaKnown RBP5.81□□□□□ -1.48
RFC1-216ENST00000514572 AASSQ9UDR5 926 aa5.81□□□□□ -1.48
RFC1-216ENST00000514572 SERTAD3Q9UJW9 196 aa5.81□□□□□ -1.48
RFC1-216ENST00000514572 SORCS3Q9UPU3 1222 aa5.81□□□□□ -1.48
RFC1-216ENST00000514572 RABGAP1Q9Y3P9 1069 aa5.81□□□□□ -1.48
RFC1-216ENST00000514572 MROH2BQ7Z745 1585 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 LMTK3Q96Q04 1460 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 KRTAP4-8A0A0G2JLE6 195 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 MYADML2A6NDP7 307 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 PGPEP1LA6NFU8 196 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 SAC3D1A6NKF1 404 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 GOLGA6L6A8MZA4 724 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 EXOC5O00471 708 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 TRIM24O15164 1050 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 GPR42O15529 346 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 TGM1P22735 817 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 CASP6P55212 293 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 FAM3BP58499 235 aaPredicted RBP5.8□□□□□ -1.48
RFC1-216ENST00000514572 CXADRP78310 365 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 SP2Q02086 613 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 RPS6KA2Q15349 733 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 BAK1Q16611 211 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 GEN1Q17RS7 908 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 AASDHQ4L235 1098 aaPredicted RBP5.8□□□□□ -1.48
RFC1-216ENST00000514572 SLC45A4Q5BKX6 768 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 TMEM196Q5HYL7 178 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 ZNF484Q5JVG2 852 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 CCDC30Q5VVM6 783 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 ANO7Q6IWH7 933 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 MAMDC4Q6UXC1 1216 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 GDF7Q7Z4P5 450 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 TTC30AQ86WT1 665 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 TMTC2Q8N394 836 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 TMEM132CQ8N3T6 1108 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 ANKRD52Q8NB46 1076 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 ZMIZ2Q8NF64 920 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 TDRD7Q8NHU6 1098 aaKnown RBP5.8□□□□□ -1.48
RFC1-216ENST00000514572 TBC1D22AQ8WUA7 517 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 OSCP1Q8WVF1 389 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 HMGB4Q8WW32 186 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 SNX19Q92543 992 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 FUBP1Q96AE4 644 aaKnown RBP5.8□□□□□ -1.48
RFC1-216ENST00000514572 SSBP3Q9BWW4 388 aaPredicted RBP5.8□□□□□ -1.48
RFC1-216ENST00000514572 GPR87Q9BY21 358 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms