RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 NEU2Q9Y3R4 380 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 LRP6O75581 1613 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 PGM3O95394 542 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 CLPTM1O96005 669 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 MAPTP10636 758 aaKnown RBP11.2□□□□□ -0.62
CPNE4-209ENST00000512055 HMOX2P30519 316 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 RAP1GAPP47736 663 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 RCN1Q15293 331 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 RNF19BQ6ZMZ0 732 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 NT5DC3Q86UY8 548 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 DIS3LQ8TF46 1054 aaKnown RBP11.2□□□□□ -0.62
CPNE4-209ENST00000512055 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.2□□□□□ -0.62
CPNE4-209ENST00000512055 PLEKHA8Q96JA3 519 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 LCMT1Q9UIC8 334 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 UBIAD1Q9Y5Z9 338 aa11.2□□□□□ -0.62
CPNE4-209ENST00000512055 M0R2N6 131 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 ZNF806P0C7X5 589 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 POU5F1BQ06416 359 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 MAPRE2Q15555 327 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 OASLQ15646 514 aaKnown RBP11.19□□□□□ -0.62
CPNE4-209ENST00000512055 MFN1Q8IWA4 741 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 TBATAQ96M53 351 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 CITED4Q96RK1 184 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 KCNK16Q96T55 309 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 ZNF556Q9HAH1 456 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 C20orf96Q9NUD7 363 aaPredicted RBP11.19□□□□□ -0.62
CPNE4-209ENST00000512055 BTN3A3O00478 584 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 KCNN4O15554 427 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 ADRB2P07550 413 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 C21orf59P57076 290 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 ERVK-9P63128 1117 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 FCHO2Q0JRZ9 810 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 LAMTOR4Q0VGL1 99 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 PDAP1Q13442 181 aaKnown RBP11.19□□□□□ -0.62
CPNE4-209ENST00000512055 C9orf131Q5VYM1 1079 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 HEATR6Q6AI08 1181 aaKnown RBP11.19□□□□□ -0.62
CPNE4-209ENST00000512055 METTL7BQ6UX53 244 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 APTXQ7Z2E3 356 aaKnown RBP11.19□□□□□ -0.62
CPNE4-209ENST00000512055 SCN4BQ8IWT1 228 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 RNF139Q8WU17 664 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 CHID1Q9BWS9 393 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 FBXO9Q9UK97 447 aaPredicted RBP11.19□□□□□ -0.62
CPNE4-209ENST00000512055 BAZ2AQ9UIF9 1905 aaKnown RBP11.19□□□□□ -0.62
CPNE4-209ENST00000512055 PDZK1P1A8MUH7 402 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 FAM107AO95990 144 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 ALBP02768 609 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 ATF4P18848 351 aaPredicted RBP11.19□□□□□ -0.62
CPNE4-209ENST00000512055 XPAP23025 273 aaPredicted RBP11.19□□□□□ -0.62
CPNE4-209ENST00000512055 KRT20P35900 424 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 CLK2P49760 499 aaKnown RBP11.19□□□□□ -0.62
CPNE4-209ENST00000512055 COBLL1Q53SF7 1204 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 AADACL2Q6P093 401 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 ATP11CQ8NB49 1132 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 SGSM3Q96HU1 749 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 CPB2Q96IY4 423 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 CGRRF1Q99675 332 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 NT5C1AQ9BXI3 368 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 CCSER2Q9H7U1 834 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 PCDHGC5Q9Y5F6 944 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 SLIT2O94813 1529 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 TNPO2O14787 897 aaKnown RBP11.19□□□□□ -0.62
CPNE4-209ENST00000512055 SNX2O60749 519 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 IL18RAPO95256 599 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 MAP3K6O95382 1288 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 NPTXRO95502 500 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 C6orf222P0C671 652 aaPredicted RBP11.19□□□□□ -0.62
CPNE4-209ENST00000512055 ALDH5A1P51649 535 aaPredicted RBP11.19□□□□□ -0.62
CPNE4-209ENST00000512055 TAF1CQ15572 869 aaPredicted RBP11.19□□□□□ -0.62
CPNE4-209ENST00000512055 MAP4K3Q8IVH8 894 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 BBS5Q8N3I7 341 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 ULK4Q96C45 1275 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 HDHD2Q9H0R4 259 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 KLK14Q9P0G3 267 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 H2AFY2Q9P0M6 372 aaPredicted RBP11.19□□□□□ -0.62
CPNE4-209ENST00000512055 ALS2Q96Q42 1657 aa11.19□□□□□ -0.62
CPNE4-209ENST00000512055 TBC1D12O60347 775 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 AGTP01019 485 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 APRTP07741 180 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 MYBL2P10244 700 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 CYP2C9P11712 490 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 TUFMP49411 452 aaKnown RBP11.18□□□□□ -0.62
CPNE4-209ENST00000512055 KIZQ2M2Z5 673 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 FRA10AC1Q70Z53 315 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 DDIASQ8IXT1 998 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 C4orf33Q8N1A6 199 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 BCAS3Q9H6U6 928 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 CISHQ9NSE2 258 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 IL1RAPL1Q9NZN1 696 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 WDR35Q9P2L0 1181 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 DTNAQ9Y4J8 743 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 SNED1Q8TER0 1413 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 SPDYE5A6NIY4 337 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 ANGPT2O15123 496 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 CXCL8P10145 99 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 AKAP5P24588 427 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 TARSP26639 723 aaKnown RBP11.18□□□□□ -0.62
CPNE4-209ENST00000512055 HNRNPH3P31942 346 aaKnown RBP11.18□□□□□ -0.62
CPNE4-209ENST00000512055 AMPD2Q01433 879 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 COX10Q12887 443 aa11.18□□□□□ -0.62
CPNE4-209ENST00000512055 CLEC16AQ2KHT3 1053 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms