RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 UNC79Q9P2D8 2635 aa4.35□□□□□ -1.71
TOPBP1-208ENST00000511439 TJP1Q07157 1748 aa4.35□□□□□ -1.71
TOPBP1-208ENST00000511439 ZNF646O15015 1829 aaPredicted RBP4.35□□□□□ -1.71
TOPBP1-208ENST00000511439 CCDC194A0A1B0GVG4 234 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 CCDC78A2IDD5 438 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 ZNF785A8K8V0 405 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 GOLIM4O00461 696 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 SPDEFO95238 335 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 MYL1P05976 194 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 KITP10721 976 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 ITGAMP11215 1152 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 CAPN2P17655 700 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 FDXRP22570 491 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 ARFIP2P53365 341 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 PSMC1P62191 440 aaKnown RBP4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 OCA2Q04671 838 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 TCF15Q12870 199 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 FOXI1Q12951 378 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 HABP2Q14520 560 aaPredicted RBP4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 PPP4R4Q6NUP7 873 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 APOA5Q6Q788 366 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 OLFM4Q6UX06 510 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 KSR2Q6VAB6 950 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 CCDC146Q8IYE0 955 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 CFAP52Q8N1V2 620 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 PDPRQ8NCN5 879 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 ASB10Q8WXI3 467 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 LRTOMTQ8WZ04 291 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 DUSP26Q9BV47 211 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 SPATA5L1Q9BVQ7 753 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 VSX1Q9NZR4 365 aaPredicted RBP4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 HSFX1Q9UBD0 423 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 USP25Q9UHP3 1055 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 TLK1Q9UKI8 766 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 TPCN1Q9ULQ1 816 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 AGAP1Q9UPQ3 857 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 MED16Q9Y2X0 877 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 SNED1Q8TER0 1413 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 SSC5DA1L4H1 1573 aa4.34□□□□□ -1.71
TOPBP1-208ENST00000511439 ZDBF2Q9HCK1 2354 aa4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 KAT6AQ92794 2004 aa4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 RGPD2P0DJD1 1756 aa4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 RTL1A6NKG5 1358 aa4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 MANSC4A6NHS7 340 aaPredicted RBP4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 MYO1FO00160 1098 aa4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 GPANK1O95872 356 aa4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 CHEK2O96017 543 aa4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 GNAI2P04899 355 aa4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 ZNF37AP17032 561 aaPredicted RBP4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 FGFR4P22455 802 aa4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 PEX2P28328 305 aa4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 HOXC9P31274 260 aa4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 AMPHP49418 695 aa4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 ZNF135P52742 658 aaPredicted RBP4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 POU6F2P78424 691 aaPredicted RBP4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 HSD11B2P80365 405 aa4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 TNIP1Q15025 636 aa4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 POLD3Q15054 466 aaPredicted RBP4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 SAFBQ15424 915 aaKnown RBP eCLIP4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 COBLL1Q53SF7 1204 aa4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 B3GNTL1Q67FW5 361 aaPredicted RBP4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 PPP1R32Q7Z5V6 425 aa4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 USP37Q86T82 979 aa4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.33□□□□□ -1.721e-6■□□□□ 9.3
TOPBP1-208ENST00000511439 CCAR1Q8IX12 1150 aaKnown RBP4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 TMEM132CQ8N3T6 1108 aa4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 BOLLQ8N9W6 283 aaKnown RBP4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 Q8NA96 180 aa4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 PJA1Q8NG27 643 aa4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 U2AF1L4Q8WU68 220 aaKnown RBP4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 KBTBD7Q8WVZ9 684 aa4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 APIPQ96GX9 242 aa4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 MED15Q96RN5 788 aa4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 ZSWIM1Q9BR11 485 aa4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 TRIM54Q9BYV2 358 aa4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 TINAGL1Q9GZM7 467 aaPredicted RBP4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 SIK2Q9H0K1 926 aa4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 TESQ9UGI8 421 aaKnown RBP4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 CNOT7Q9UIV1 285 aaKnown RBP4.33□□□□□ -1.72
TOPBP1-208ENST00000511439 SCN7AQ01118 1682 aa4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 ISM1B1AKI9 464 aa4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 TBX3O15119 743 aa4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 PPIP5K2O43314 1243 aa4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 DNAJB5O75953 348 aa4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 MAP4K4O95819 1239 aaPredicted RBP4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 MYF5P13349 255 aa4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 CCL5P13501 91 aa4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 PHKG2P15735 406 aa4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 MPLP40238 635 aa4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 KCNJ5P48544 419 aa4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 EIF5P55010 431 aaKnown RBP4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 PRMT2P55345 433 aa4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 CXCL9Q07325 125 aa4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 PIGFQ07326 219 aa4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 SLC44A3Q8N4M1 653 aa4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 FUBP1Q96AE4 644 aaKnown RBP4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 BOD1Q96IK1 185 aa4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 DPH1Q9BZG8 443 aa4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 LRRC27Q9C0I9 530 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms