RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 CACNA1SQ13698 1873 aa10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 A0A1W2PQJ5 194 aa10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 SSU72P8A0A1W2PR75 194 aa10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 LRRD1A4D1F6 860 aa10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 BUB1O43683 1085 aa10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 TLR5O60602 858 aa10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 DAB2P98082 770 aa10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 DUSP4Q13115 394 aa10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 CENPPQ6IPU0 288 aa10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 ALKBH5Q6P6C2 394 aaKnown RBP10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 PSTKQ8IV42 348 aaKnown RBP10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 DHX35Q9H5Z1 703 aaKnown RBP10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 FNDC3AQ9Y2H6 1198 aaKnown RBP10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 UTP11Q9Y3A2 253 aaKnown RBP10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 MRPL42Q9Y6G3 142 aaKnown RBP10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 C3orf70A6NLC5 250 aaPredicted RBP10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 DHX15O43143 795 aaKnown RBP10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 RAMP2O60895 175 aa10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 CRCPO75575 148 aa10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 HMBSP08397 361 aa10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 TRIM49P0CI25 452 aa10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 TRIM49CP0CI26 452 aa10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 SPATA31C1P0DKV0 1188 aa10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 BDNFP23560 247 aa10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 HDAC4P56524 1084 aa10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 YBEYP58557 167 aaPredicted RBP10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 TCEAL5Q5H9L2 206 aa10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 ARHGAP17Q68EM7 881 aa10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 KSR1Q8IVT5 923 aa10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 BEND7Q8N7W2 519 aaPredicted RBP10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 FEM1CQ96JP0 617 aa10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 PKD2L2Q9NZM6 624 aa10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 CXXC1Q9P0U4 656 aaPredicted RBP10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 PKP3Q9Y446 797 aa10.05□□□□□ -0.8
POLR2J3-215ENST00000511313 ATF2P15336 505 aa10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 CDC25BP30305 580 aa10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 VCPP55072 806 aaKnown RBP10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 TTLL9Q3SXZ7 439 aa10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 NT5DC1Q5TFE4 455 aa10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 FBXL19Q6PCT2 694 aa10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 DARS2Q6PI48 645 aaKnown RBP10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 RNF10Q8N5U6 811 aaKnown RBP10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 C7orf57Q8NEG2 295 aa10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 BTN2A3PQ96KV6 586 aa10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 GRPEL1Q9HAV7 217 aa10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 TDP1Q9NUW8 608 aa10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 CFAP97Q9P2B7 532 aa10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 CACNB4O00305 520 aaPredicted RBP10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 ARL1P40616 181 aaPredicted RBP10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 DGKGP49619 791 aa10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 RGS19P49795 217 aa10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 ZBTB16Q05516 673 aa10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 ORC1Q13415 861 aa10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 MKRN4PQ13434 485 aaPredicted RBP10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 HLTFQ14527 1009 aaKnown RBP eCLIP10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 RALGPS1Q5JS13 557 aa10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 TMEM164Q5U3C3 297 aa10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 FYB2Q5VWT5 728 aa10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 DNAJB7Q7Z6W7 309 aaPredicted RBP10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 MIB1Q86YT6 1006 aa10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 SH2D3AQ9BRG2 576 aa10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 C11orf70Q9BRQ4 267 aa10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 NLNQ9BYT8 704 aa10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 BFARQ9NZS9 450 aa10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 AP5Z1O43299 807 aa10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 RPL17P18621 184 aaKnown RBP10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 SHROOM1Q2M3G4 852 aaPredicted RBP10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 MYLIPQ8WY64 445 aa10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 R3HDMLQ9H3Y0 253 aa10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 DNAJC17Q9NVM6 304 aaKnown RBP10.04□□□□□ -0.8
POLR2J3-215ENST00000511313 NPHP3-ACAD11A0A0J9YXS1 232 aa10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 CTAGE15A4D2H0 777 aa10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 MYADML2A6NDP7 307 aa10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 PCDH8O95206 1070 aa10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 CTAGE8P0CG41 777 aa10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 VAV2P52735 878 aa10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 CDR2Q01850 454 aa10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 LEXMQ3ZCV2 418 aa10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 EEF1DP3Q658K8 133 aa10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 PRR23BQ6ZRT6 265 aa10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 SLFN11Q7Z7L1 901 aa10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 CTAGE6Q86UF2 777 aa10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 CTAGE4Q8IX94 777 aa10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 NDRG2Q9UN36 371 aaKnown RBP10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 AAR2Q9Y312 384 aaKnown RBP10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 PHIPQ8WWQ0 1821 aa10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 DAB1O75553 588 aa10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 APBB3O95704 486 aa10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 LILRA4P59901 499 aa10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 MRPS21P82921 87 aaKnown RBP10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 UGCGQ16739 394 aa10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 ZACNQ401N2 412 aa10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 NAA35Q5VZE5 725 aa10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 USP45Q70EL2 814 aa10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 DNAAF3Q8N9W5 541 aa10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 CBWD1Q9BRT8 395 aa10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 FANCEQ9HB96 536 aa10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 AASDHPPTQ9NRN7 309 aa10.03□□□□□ -0.8
POLR2J3-215ENST00000511313 ADH1BP00325 375 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms