RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 ATG7O95352 703 aa18.41■□□□□ 0.54
NUP54-205ENST00000507257 APOEP02649 317 aa18.41■□□□□ 0.54
NUP54-205ENST00000507257 ITGA2BP08514 1039 aa18.41■□□□□ 0.54
NUP54-205ENST00000507257 ALOX15P16050 662 aaPredicted RBP18.41■□□□□ 0.54
NUP54-205ENST00000507257 DLG1Q12959 904 aa18.41■□□□□ 0.54
NUP54-205ENST00000507257 CYS1Q717R9 158 aa18.41■□□□□ 0.54
NUP54-205ENST00000507257 CTAGE3PQ8IX95 158 aa18.41■□□□□ 0.54
NUP54-205ENST00000507257 RBM12BQ8IXT5 1001 aaKnown RBP18.41■□□□□ 0.54
NUP54-205ENST00000507257 SLC25A41Q8N5S1 370 aa18.41■□□□□ 0.54
NUP54-205ENST00000507257 MCUQ8NE86 351 aa18.41■□□□□ 0.54
NUP54-205ENST00000507257 ACMSDQ8TDX5 336 aa18.41■□□□□ 0.54
NUP54-205ENST00000507257 CMTM5Q96DZ9 223 aa18.41■□□□□ 0.54
NUP54-205ENST00000507257 C20orf27Q9GZN8 174 aa18.41■□□□□ 0.54
NUP54-205ENST00000507257 HAPLN2Q9GZV7 340 aa18.41■□□□□ 0.54
NUP54-205ENST00000507257 POLR3FQ9H1D9 316 aaPredicted RBP18.41■□□□□ 0.54
NUP54-205ENST00000507257 SUDS3Q9H7L9 328 aaPredicted RBP18.41■□□□□ 0.54
NUP54-205ENST00000507257 PLAC1Q9HBJ0 212 aa18.41■□□□□ 0.54
NUP54-205ENST00000507257 DNAJC28Q9NX36 388 aa18.41■□□□□ 0.54
NUP54-205ENST00000507257 ZC3H7BQ9UGR2 993 aaKnown RBP18.41■□□□□ 0.54
NUP54-205ENST00000507257 CDH22Q9UJ99 828 aa18.41■□□□□ 0.54
NUP54-205ENST00000507257 APOBEC2Q9Y235 224 aaKnown RBP18.41■□□□□ 0.54
NUP54-205ENST00000507257 FAM159BA6NKW6 160 aa18.4■□□□□ 0.54
NUP54-205ENST00000507257 IMPDH2P12268 514 aa18.4■□□□□ 0.54
NUP54-205ENST00000507257 PEX2P28328 305 aa18.4■□□□□ 0.54
NUP54-205ENST00000507257 SOX10P56693 466 aa18.4■□□□□ 0.54
NUP54-205ENST00000507257 MYBPC3Q14896 1274 aa18.4■□□□□ 0.54
NUP54-205ENST00000507257 FAM47CQ5HY64 1035 aa18.4■□□□□ 0.54
NUP54-205ENST00000507257 B3GNT6Q6ZMB0 384 aa18.4■□□□□ 0.54
NUP54-205ENST00000507257 KBTBD6Q86V97 674 aa18.4■□□□□ 0.54
NUP54-205ENST00000507257 SLC4A11Q8NBS3 891 aa18.4■□□□□ 0.54
NUP54-205ENST00000507257 KCTD6Q8NC69 237 aa18.4■□□□□ 0.54
NUP54-205ENST00000507257 ICA1LQ8NDH6 482 aa18.4■□□□□ 0.54
NUP54-205ENST00000507257 SLC26A7Q8TE54 656 aa18.4■□□□□ 0.54
NUP54-205ENST00000507257 FAF2Q96CS3 445 aa18.4■□□□□ 0.54
NUP54-205ENST00000507257 ZFRQ96KR1 1074 aaKnown RBP18.4■□□□□ 0.54
NUP54-205ENST00000507257 EBF4Q9BQW3 602 aa18.4■□□□□ 0.54
NUP54-205ENST00000507257 PDCD2LQ9BRP1 358 aa18.4■□□□□ 0.54
NUP54-205ENST00000507257 C6orf203Q9P0P8 240 aaPredicted RBP18.4■□□□□ 0.54
NUP54-205ENST00000507257 GABBR1Q9UBS5 961 aa18.4■□□□□ 0.54
NUP54-205ENST00000507257 SCN4AP35499 1836 aa18.39■□□□□ 0.54
NUP54-205ENST00000507257 A6NJR5 290 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 CXorf49A8MYA2 514 aaPredicted RBP18.39■□□□□ 0.53
NUP54-205ENST00000507257 TBC1D12O60347 775 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 CCDC166P0CW27 439 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 ETS2P15036 469 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 OSBPP22059 807 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 MAGEA3P43357 314 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 GABRB2P47870 512 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 YWHAEP62258 255 aaKnown RBP18.39■□□□□ 0.53
NUP54-205ENST00000507257 SLC25A3Q00325 362 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 CREB5Q02930 508 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 SNAPC2Q13487 334 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 TFDP2Q14188 446 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 SMTNL2Q2TAL5 461 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 LPCAT4Q643R3 524 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 MBLAC2Q68D91 279 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 DARS2Q6PI48 645 aaKnown RBP18.39■□□□□ 0.53
NUP54-205ENST00000507257 C4orf22Q6V702 233 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 SATL1Q86VE3 508 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 KIAA0319LQ8IZA0 1049 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 OR5B17Q8NGF7 314 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 MIPOL1Q8TD10 442 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 GPRASP2Q96D09 838 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 CFAP36Q96G28 342 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 MAML3Q96JK9 1138 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 TAAR1Q96RJ0 339 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 NIF3L1Q9GZT8 377 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 Q9H521 79 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 ZNF395Q9H8N7 513 aaPredicted RBP18.39■□□□□ 0.53
NUP54-205ENST00000507257 PPP1R1BQ9UD71 204 aaPredicted RBP18.39■□□□□ 0.53
NUP54-205ENST00000507257 POMPQ9Y244 141 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 C15orf38-AP3S2A0A0A6YYH1 394 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 CYB561D2O14569 222 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 KITP10721 976 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 FDFT1P37268 417 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 USP41Q3LFD5 358 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 KCNT1Q5JUK3 1230 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 BORAQ6PGQ7 559 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 POTEAQ6S8J7 498 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 ARPINQ7Z6K5 226 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 WDR49Q8IV35 697 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 NDUFAF2Q8N183 169 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 PPP1R14BQ96C90 147 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 CISHQ9NSE2 258 aa18.39■□□□□ 0.53
NUP54-205ENST00000507257 MARCOQ9UEW3 520 aaPredicted RBP18.39■□□□□ 0.53
NUP54-205ENST00000507257 MEI4A8MW99 385 aa18.38■□□□□ 0.53
NUP54-205ENST00000507257 H3BNX3 289 aa18.38■□□□□ 0.53
NUP54-205ENST00000507257 SIN3BO75182 1162 aa18.38■□□□□ 0.53
NUP54-205ENST00000507257 TRUB2O95900 331 aaKnown RBP18.38■□□□□ 0.53
NUP54-205ENST00000507257 GSRP00390 522 aa18.38■□□□□ 0.53
NUP54-205ENST00000507257 CD48P09326 243 aa18.38■□□□□ 0.53
NUP54-205ENST00000507257 EIF2AK2P19525 551 aaKnown RBP18.38■□□□□ 0.53
NUP54-205ENST00000507257 NAMPTP43490 491 aa18.38■□□□□ 0.53
NUP54-205ENST00000507257 FOLH1Q04609 750 aa18.38■□□□□ 0.53
NUP54-205ENST00000507257 TTLL12Q14166 644 aaPredicted RBP18.38■□□□□ 0.53
NUP54-205ENST00000507257 PTPN20Q4JDL3 420 aa18.38■□□□□ 0.53
NUP54-205ENST00000507257 HSP90AA5PQ58FG0 334 aa18.38■□□□□ 0.53
NUP54-205ENST00000507257 TEDDM1Q5T9Z0 273 aa18.38■□□□□ 0.53
NUP54-205ENST00000507257 CYP4A22Q5TCH4 519 aa18.38■□□□□ 0.53
NUP54-205ENST00000507257 KLC3Q6P597 504 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms