RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 KLHDC10Q6PID8 442 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 MMS22LQ6ZRQ5 1243 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 MON1BQ7L1V2 547 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 VPS36Q86VN1 386 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 CMTM8Q8IZV2 173 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 ARL14EPQ8N8R7 260 aaPredicted RBP13.47□□□□□ -0.25
TCOF1-210ENST00000506767 TDRD5Q8NAT2 981 aaKnown RBP13.47□□□□□ -0.25
TCOF1-210ENST00000506767 SPC24Q8NBT2 197 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 MSANTD4Q8NCY6 345 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 ZSCAN18Q8TBC5 510 aaPredicted RBP13.47□□□□□ -0.25
TCOF1-210ENST00000506767 PIWIL1Q96J94 861 aaKnown RBP13.47□□□□□ -0.25
TCOF1-210ENST00000506767 VCPIP1Q96JH7 1222 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 RPGRIP1Q96KN7 1286 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 ASB16Q96NS5 453 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 CYP2S1Q96SQ9 504 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 ISCUQ9H1K1 167 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 CCSER2Q9H7U1 834 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 ABCC13Q9NSE7 274 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 ASNSD1Q9NWL6 643 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 NAGPAQ9UK23 515 aa13.47□□□□□ -0.25
TCOF1-210ENST00000506767 TRAV19A0A0A6YYK7 116 aa13.46□□□□□ -0.25
TCOF1-210ENST00000506767 TCRBV5S1A1TA0A578 114 aa13.46□□□□□ -0.25
TCOF1-210ENST00000506767 FAM170AA1A519 330 aa13.46□□□□□ -0.25
TCOF1-210ENST00000506767 ANHXE9PGG2 379 aa13.46□□□□□ -0.25
TCOF1-210ENST00000506767 COCHO43405 550 aa13.46□□□□□ -0.25
TCOF1-210ENST00000506767 TLR5O60602 858 aa13.46□□□□□ -0.25
TCOF1-210ENST00000506767 RTN2O75298 545 aa13.46□□□□□ -0.25
TCOF1-210ENST00000506767 GLI1P08151 1106 aa13.46□□□□□ -0.25
TCOF1-210ENST00000506767 RALAP11233 206 aa13.46□□□□□ -0.25
TCOF1-210ENST00000506767 HDCP19113 662 aa13.46□□□□□ -0.25
TCOF1-210ENST00000506767 SP100P23497 879 aaPredicted RBP13.46□□□□□ -0.25
TCOF1-210ENST00000506767 FCARP24071 287 aa13.46□□□□□ -0.25
TCOF1-210ENST00000506767 SLC7A9P82251 487 aa13.46□□□□□ -0.25
TCOF1-210ENST00000506767 C1QBPQ07021 282 aaKnown RBP13.46□□□□□ -0.25
TCOF1-210ENST00000506767 TAF5Q15542 800 aa13.46□□□□□ -0.25
TCOF1-210ENST00000506767 SLC18A3Q16572 532 aa13.46□□□□□ -0.25
TCOF1-210ENST00000506767 C2CD6Q53TS8 623 aa13.46□□□□□ -0.25
TCOF1-210ENST00000506767 EFHC1Q5JVL4 640 aa13.46□□□□□ -0.25
TCOF1-210ENST00000506767 BTBD8Q5XKL5 378 aa13.46□□□□□ -0.25
TCOF1-210ENST00000506767 SLC26A9Q7LBE3 791 aa13.46□□□□□ -0.25
TCOF1-210ENST00000506767 ARID3BQ8IVW6 561 aaPredicted RBP13.46□□□□□ -0.25
TCOF1-210ENST00000506767 MCOLN2Q8IZK6 566 aa13.46□□□□□ -0.25
TCOF1-210ENST00000506767 SMARCD2Q92925 531 aa13.46□□□□□ -0.25
TCOF1-210ENST00000506767 C11orf70Q9BRQ4 267 aa13.46□□□□□ -0.25
TCOF1-210ENST00000506767 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.46□□□□□ -0.25
TCOF1-210ENST00000506767 SLITRK6Q9H5Y7 841 aa13.46□□□□□ -0.25
TCOF1-210ENST00000506767 SYNCQ9H7C4 482 aa13.46□□□□□ -0.25
TCOF1-210ENST00000506767 NHEJ1Q9H9Q4 299 aaPredicted RBP13.46□□□□□ -0.25
TCOF1-210ENST00000506767 TRPC7Q9HCX4 862 aa13.46□□□□□ -0.25
TCOF1-210ENST00000506767 ADAM22Q9P0K1 906 aa13.46□□□□□ -0.25
TCOF1-210ENST00000506767 WDR35Q9P2L0 1181 aa13.46□□□□□ -0.25
TCOF1-210ENST00000506767 STRIP2Q9ULQ0 834 aa13.46□□□□□ -0.25
TCOF1-210ENST00000506767 HELZP42694 1942 aaKnown RBP13.46□□□□□ -0.25
TCOF1-210ENST00000506767 PRAMEF12O95522 483 aa13.45□□□□□ -0.26
TCOF1-210ENST00000506767 TBX18O95935 607 aa13.45□□□□□ -0.26
TCOF1-210ENST00000506767 FTLP02792 175 aaPredicted RBP13.45□□□□□ -0.26
TCOF1-210ENST00000506767 CALB1P05937 261 aa13.45□□□□□ -0.26
TCOF1-210ENST00000506767 TCF3P15923 654 aa13.45□□□□□ -0.26
TCOF1-210ENST00000506767 ATP5C1P36542 298 aaKnown RBP13.45□□□□□ -0.26
TCOF1-210ENST00000506767 AVPR1AP37288 418 aa13.45□□□□□ -0.26
TCOF1-210ENST00000506767 YWHAZP63104 245 aaKnown RBP13.45□□□□□ -0.26
TCOF1-210ENST00000506767 ZXDBP98169 803 aa13.45□□□□□ -0.26
TCOF1-210ENST00000506767 HTR4Q13639 388 aa13.45□□□□□ -0.26
TCOF1-210ENST00000506767 MSANTD2Q6P1R3 559 aa13.45□□□□□ -0.26
TCOF1-210ENST00000506767 PARM1Q6UWI2 310 aa13.45□□□□□ -0.26
TCOF1-210ENST00000506767 TOGARAM2Q6ZUX3 1019 aa13.45□□□□□ -0.26
TCOF1-210ENST00000506767 ARCQ7LC44 396 aa13.45□□□□□ -0.26
TCOF1-210ENST00000506767 FGF14Q92915 247 aa13.45□□□□□ -0.26
TCOF1-210ENST00000506767 USP13Q92995 863 aaPredicted RBP13.45□□□□□ -0.26
TCOF1-210ENST00000506767 ZFRQ96KR1 1074 aaKnown RBP13.45□□□□□ -0.26
TCOF1-210ENST00000506767 SLC2A13Q96QE2 648 aa13.45□□□□□ -0.26
TCOF1-210ENST00000506767 CDK5RAP1Q96SZ6 601 aaKnown RBP13.45□□□□□ -0.26
TCOF1-210ENST00000506767 POPDC2Q9HBU9 364 aa13.45□□□□□ -0.26
TCOF1-210ENST00000506767 TDP1Q9NUW8 608 aa13.45□□□□□ -0.26
TCOF1-210ENST00000506767 OBP2AQ9NY56 170 aa13.45□□□□□ -0.26
TCOF1-210ENST00000506767 TMEM59LQ9UK28 342 aa13.45□□□□□ -0.26
TCOF1-210ENST00000506767 NUDT5Q9UKK9 219 aa13.45□□□□□ -0.26
TCOF1-210ENST00000506767 ARHGAP26Q9UNA1 814 aa13.45□□□□□ -0.26
TCOF1-210ENST00000506767 C5orf42Q9H799 3197 aa13.44□□□□□ -0.26
TCOF1-210ENST00000506767 TMCO5BA8MYB1 307 aa13.44□□□□□ -0.26
TCOF1-210ENST00000506767 HSF2BPO75031 334 aa13.44□□□□□ -0.26
TCOF1-210ENST00000506767 ECI2O75521 394 aa13.44□□□□□ -0.26
TCOF1-210ENST00000506767 GFPT1Q06210 699 aaPredicted RBP13.44□□□□□ -0.26
TCOF1-210ENST00000506767 SYPL2Q5VXT5 272 aa13.44□□□□□ -0.26
TCOF1-210ENST00000506767 TANGO2Q6ICL3 276 aa13.44□□□□□ -0.26
TCOF1-210ENST00000506767 ALKBH5Q6P6C2 394 aaKnown RBP13.44□□□□□ -0.26
TCOF1-210ENST00000506767 MTSS1LQ765P7 747 aa13.44□□□□□ -0.26
TCOF1-210ENST00000506767 TADA2BQ86TJ2 420 aa13.44□□□□□ -0.26
TCOF1-210ENST00000506767 DNAAF5Q86Y56 855 aa13.44□□□□□ -0.26
TCOF1-210ENST00000506767 TMEM139Q8IV31 216 aa13.44□□□□□ -0.26
TCOF1-210ENST00000506767 C3orf20Q8ND61 904 aa13.44□□□□□ -0.26
TCOF1-210ENST00000506767 EDEM1Q92611 657 aa13.44□□□□□ -0.26
TCOF1-210ENST00000506767 GOLGA1Q92805 767 aa13.44□□□□□ -0.26
TCOF1-210ENST00000506767 NXPE3Q969Y0 559 aa13.44□□□□□ -0.26
TCOF1-210ENST00000506767 E2F7Q96AV8 911 aa13.44□□□□□ -0.26
TCOF1-210ENST00000506767 ELSPBP1Q96BH3 223 aa13.44□□□□□ -0.26
TCOF1-210ENST00000506767 FAM149B1Q96BN6 582 aa13.44□□□□□ -0.26
TCOF1-210ENST00000506767 RSPRY1Q96DX4 576 aa13.44□□□□□ -0.26
TCOF1-210ENST00000506767 CCDC42Q96M95 316 aa13.44□□□□□ -0.26
TCOF1-210ENST00000506767 TRIM62Q9BVG3 475 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms