RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 EIF4EBP2Q13542 120 aaPredicted RBP7.54□□□□□ -1.2
NUP54-204ENST00000506098 MTMR3Q13615 1198 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 PIGHQ14442 188 aaPredicted RBP7.54□□□□□ -1.2
NUP54-204ENST00000506098 GRIN2CQ14957 1233 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 COL19A1Q14993 1142 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 TAF5Q15542 800 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 DNTTIP2Q5QJE6 756 aaKnown RBP7.54□□□□□ -1.2
NUP54-204ENST00000506098 PPM1LQ5SGD2 360 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 ZNF697Q5TEC3 545 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 BSPRYQ5W0U4 402 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 TRNP1Q6NT89 227 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 C11orf63Q6NUN7 778 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 DCUN1D2Q6PH85 259 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 ELMSAN1Q6PJG2 1045 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 NYAP1Q6ZVC0 841 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 HFE2Q6ZVN8 426 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 DNAJB7Q7Z6W7 309 aaPredicted RBP7.54□□□□□ -1.2
NUP54-204ENST00000506098 SCD5Q86SK9 330 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 PHLDB2Q86SQ0 1253 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 RBM23Q86U06 439 aaKnown RBP7.54□□□□□ -1.2
NUP54-204ENST00000506098 TMC8Q8IU68 726 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 EGFL6Q8IUX8 553 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 EFHBQ8N7U6 833 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 LRRC57Q8N9N7 239 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 CMASQ8NFW8 434 aaPredicted RBP7.54□□□□□ -1.2
NUP54-204ENST00000506098 VN1R2Q8NFZ6 395 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 TRIM58Q8NG06 486 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 GPR152Q8TDT2 470 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 NDRG1Q92597 394 aaKnown RBP7.54□□□□□ -1.2
NUP54-204ENST00000506098 CENPIQ92674 756 aaPredicted RBP7.54□□□□□ -1.2
NUP54-204ENST00000506098 CASP10Q92851 521 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 FBXO32Q969P5 355 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 PGAP3Q96FM1 320 aaPredicted RBP7.54□□□□□ -1.2
NUP54-204ENST00000506098 ZNF512Q96ME7 567 aaPredicted RBP7.54□□□□□ -1.2
NUP54-204ENST00000506098 MCEEQ96PE7 176 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 SLITRK1Q96PX8 696 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 PRKD2Q9BZL6 878 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 PRDM12Q9H4Q4 367 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 IL21Q9HBE4 155 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 POPDC2Q9HBU9 364 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 RRAGDQ9NQL2 400 aaPredicted RBP7.54□□□□□ -1.2
NUP54-204ENST00000506098 TLR8Q9NR97 1041 aaKnown RBP7.54□□□□□ -1.2
NUP54-204ENST00000506098 DZANK1Q9NVP4 752 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 CLIC5Q9NZA1 410 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 CHORDC1Q9UHD1 332 aaPredicted RBP7.54□□□□□ -1.2
NUP54-204ENST00000506098 IP6K2Q9UHH9 426 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 ANAPC7Q9UJX3 599 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 PAXBP1Q9Y5B6 917 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 MTCH2Q9Y6C9 303 aa7.54□□□□□ -1.2
NUP54-204ENST00000506098 TICRRQ7Z2Z1 1910 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 A0A1W2PQH9 124 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 MACROD2A1Z1Q3 448 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 GRID2IPA4D2P6 1211 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 SOBPA7XYQ1 873 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 ESPNB1AK53 854 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 MYO1FO00160 1098 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 NCK2O43639 380 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 BUB1BO60566 1050 aaPredicted RBP7.53□□□□□ -1.2
NUP54-204ENST00000506098 XYLBO75191 536 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 TADA3O75528 432 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 RFPL2O75678 378 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 PROSCO94903 275 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 MOCS3O95396 460 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 GJB6O95452 261 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 FGF19O95750 216 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 GLP2RO95838 553 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 IGLV3-25P01717 112 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 TUBB4AP04350 444 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 PDGFRAP16234 1089 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 PTPN2P17706 415 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 PFKLP17858 780 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 GPD1P21695 349 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 MSNP26038 577 aaKnown RBP7.53□□□□□ -1.2
NUP54-204ENST00000506098 FLT3P36888 993 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 SLC1A1P43005 524 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 NOP2P46087 812 aaKnown RBP7.53□□□□□ -1.2
NUP54-204ENST00000506098 PGFP49763 221 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 TUBP50607 506 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 ZNF143P52747 638 aaPredicted RBP7.53□□□□□ -1.2
NUP54-204ENST00000506098 OGDHQ02218 1023 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 CTC1Q2NKJ3 1217 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 SLC25A52Q3SY17 297 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 CCDC14Q49A88 953 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 PABPC1LQ4VXU2 614 aaKnown RBP7.53□□□□□ -1.2
NUP54-204ENST00000506098 TCEAL5Q5H9L2 206 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 SYPL2Q5VXT5 272 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 BTBD8Q5XKL5 378 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 MSANTD2Q6P1R3 559 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 KLHDC10Q6PID8 442 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 STRADAQ7RTN6 431 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 TMEM150AQ86TG1 271 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 SYCE1Q8N0S2 351 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 DEFB106AQ8N104 65 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 ELMOD1Q8N336 334 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 C17orf53Q8N3J3 647 aaPredicted RBP7.53□□□□□ -1.2
NUP54-204ENST00000506098 EMC1Q8N766 993 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 LEMD2Q8NC56 503 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 STKLD1Q8NE28 680 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 RXFP2Q8WXD0 754 aa7.53□□□□□ -1.2
NUP54-204ENST00000506098 GOLGA1Q92805 767 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms