RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 CEP120Q8N960 986 aa12.96□□□□□ -0.33
AFF3-215ENST00000498090 GLIS1Q8NBF1 620 aa12.96□□□□□ -0.33
AFF3-215ENST00000498090 ACTL9Q8TC94 416 aa12.96□□□□□ -0.33
AFF3-215ENST00000498090 INPP5DQ92835 1189 aa12.96□□□□□ -0.33
AFF3-215ENST00000498090 APBB2Q92870 758 aa12.96□□□□□ -0.33
AFF3-215ENST00000498090 ANKRD27Q96NW4 1050 aa12.96□□□□□ -0.33
AFF3-215ENST00000498090 TMEM237Q96Q45 408 aa12.96□□□□□ -0.33
AFF3-215ENST00000498090 ASB7Q9H672 318 aa12.96□□□□□ -0.33
AFF3-215ENST00000498090 SYNCQ9H7C4 482 aa12.96□□□□□ -0.33
AFF3-215ENST00000498090 AGO3Q9H9G7 860 aaKnown RBP12.96□□□□□ -0.33
AFF3-215ENST00000498090 MLXIPLQ9NP71 852 aa12.96□□□□□ -0.33
AFF3-215ENST00000498090 RABGEF1Q9UJ41 708 aa12.96□□□□□ -0.33
AFF3-215ENST00000498090 MCM8Q9UJA3 840 aa12.96□□□□□ -0.33
AFF3-215ENST00000498090 PHTF1Q9UMS5 762 aa12.96□□□□□ -0.33
AFF3-215ENST00000498090 RPL26L1Q9UNX3 145 aaKnown RBP12.96□□□□□ -0.33
AFF3-215ENST00000498090 MCF2LO15068 1137 aa12.96□□□□□ -0.34
AFF3-215ENST00000498090 PQBP1O60828 265 aaKnown RBP12.96□□□□□ -0.34
AFF3-215ENST00000498090 MCF2P10911 925 aa12.96□□□□□ -0.34
AFF3-215ENST00000498090 TFDP2Q14188 446 aa12.96□□□□□ -0.34
AFF3-215ENST00000498090 MBTPS1Q14703 1052 aa12.96□□□□□ -0.34
AFF3-215ENST00000498090 STILQ15468 1287 aa12.96□□□□□ -0.34
AFF3-215ENST00000498090 SEPT7Q16181 437 aaKnown RBP12.96□□□□□ -0.34
AFF3-215ENST00000498090 TMEM132AQ24JP5 1023 aa12.96□□□□□ -0.34
AFF3-215ENST00000498090 ZNF394Q53GI3 561 aa12.96□□□□□ -0.34
AFF3-215ENST00000498090 C4orf22Q6V702 233 aa12.96□□□□□ -0.34
AFF3-215ENST00000498090 ANKRD33Q7Z3H0 272 aa12.96□□□□□ -0.34
AFF3-215ENST00000498090 XYLT1Q86Y38 959 aa12.96□□□□□ -0.34
AFF3-215ENST00000498090 ECHDC2Q86YB7 292 aa12.96□□□□□ -0.34
AFF3-215ENST00000498090 AGGF1Q8N302 714 aaeCLIP12.96□□□□□ -0.34
AFF3-215ENST00000498090 SLC4A11Q8NBS3 891 aa12.96□□□□□ -0.34
AFF3-215ENST00000498090 KCTD6Q8NC69 237 aa12.96□□□□□ -0.34
AFF3-215ENST00000498090 CPT1BQ92523 772 aa12.96□□□□□ -0.34
AFF3-215ENST00000498090 MCRS1Q96EZ8 462 aa12.96□□□□□ -0.34
AFF3-215ENST00000498090 PAWRQ96IZ0 340 aaKnown RBP12.96□□□□□ -0.34
AFF3-215ENST00000498090 LRRC37BQ96QE4 947 aa12.96□□□□□ -0.34
AFF3-215ENST00000498090 PAIP2Q9BPZ3 127 aaKnown RBP12.96□□□□□ -0.34
AFF3-215ENST00000498090 TUBB6Q9BUF5 446 aa12.96□□□□□ -0.34
AFF3-215ENST00000498090 VPS11Q9H270 941 aa12.96□□□□□ -0.34
AFF3-215ENST00000498090 EBF2Q9HAK2 575 aa12.96□□□□□ -0.34
AFF3-215ENST00000498090 IQANK1A0A1B0GTG1 560 aa12.95□□□□□ -0.34
AFF3-215ENST00000498090 CFAP69A5D8W1 941 aa12.95□□□□□ -0.34
AFF3-215ENST00000498090 STAU1O95793 577 aaKnown RBP12.95□□□□□ -0.34
AFF3-215ENST00000498090 VDRP11473 427 aa12.95□□□□□ -0.34
AFF3-215ENST00000498090 ETS1P14921 441 aa12.95□□□□□ -0.34
AFF3-215ENST00000498090 DESP17661 470 aa12.95□□□□□ -0.34
AFF3-215ENST00000498090 MSH2P43246 934 aa12.95□□□□□ -0.34
AFF3-215ENST00000498090 RAD23BP54727 409 aa12.95□□□□□ -0.34
AFF3-215ENST00000498090 LPIN1Q14693 890 aa12.95□□□□□ -0.34
AFF3-215ENST00000498090 FBXO47Q5MNV8 452 aa12.95□□□□□ -0.34
AFF3-215ENST00000498090 CYP4A22Q5TCH4 519 aa12.95□□□□□ -0.34
AFF3-215ENST00000498090 C1orf53Q5VUE5 145 aa12.95□□□□□ -0.34
AFF3-215ENST00000498090 TXNRD3NBQ6F5E7 133 aa12.95□□□□□ -0.34
AFF3-215ENST00000498090 PRUNE1Q86TP1 453 aa12.95□□□□□ -0.34
AFF3-215ENST00000498090 NT5DC4Q86YG4 428 aa12.95□□□□□ -0.34
AFF3-215ENST00000498090 MAP7D3Q8IWC1 876 aa12.95□□□□□ -0.34
AFF3-215ENST00000498090 PALM2Q8IXS6 379 aa12.95□□□□□ -0.34
AFF3-215ENST00000498090 TMEM176AQ96HP8 235 aa12.95□□□□□ -0.34
AFF3-215ENST00000498090 CYTH2Q99418 400 aa12.95□□□□□ -0.34
AFF3-215ENST00000498090 MAK16Q9BXY0 300 aaKnown RBP12.95□□□□□ -0.34
AFF3-215ENST00000498090 LRMDAQ9H2I8 198 aa12.95□□□□□ -0.34
AFF3-215ENST00000498090 C11orf49Q9H6J7 331 aa12.95□□□□□ -0.34
AFF3-215ENST00000498090 GOLGA8SH3BPF8 625 aa12.94□□□□□ -0.34
AFF3-215ENST00000498090 CILPO75339 1184 aa12.94□□□□□ -0.34
AFF3-215ENST00000498090 TROVE2P10155 538 aaKnown RBP eCLIP12.94□□□□□ -0.34
AFF3-215ENST00000498090 RPL22P35268 128 aaKnown RBP12.94□□□□□ -0.34
AFF3-215ENST00000498090 ZNF143P52747 638 aaPredicted RBP12.94□□□□□ -0.34
AFF3-215ENST00000498090 SNX16P57768 344 aa12.94□□□□□ -0.34
AFF3-215ENST00000498090 GPX6P59796 221 aa12.94□□□□□ -0.34
AFF3-215ENST00000498090 FASTKD3Q14CZ7 662 aaKnown RBP12.94□□□□□ -0.34
AFF3-215ENST00000498090 PCBP1Q15365 356 aaKnown RBP eCLIP12.94□□□□□ -0.34
AFF3-215ENST00000498090 LRRC26Q2I0M4 334 aa12.94□□□□□ -0.34
AFF3-215ENST00000498090 SLC45A4Q5BKX6 768 aa12.94□□□□□ -0.34
AFF3-215ENST00000498090 UBXN11Q5T124 520 aa12.94□□□□□ -0.34
AFF3-215ENST00000498090 C3orf62Q6ZUJ4 267 aa12.94□□□□□ -0.34
AFF3-215ENST00000498090 RFX6Q8HWS3 928 aa12.94□□□□□ -0.34
AFF3-215ENST00000498090 TMEM192Q8IY95 271 aa12.94□□□□□ -0.34
AFF3-215ENST00000498090 CFAP61Q8NHU2 1237 aa12.94□□□□□ -0.34
AFF3-215ENST00000498090 RMDN2Q96LZ7 410 aa12.94□□□□□ -0.34
AFF3-215ENST00000498090 EIF2AQ9BY44 585 aaKnown RBP12.94□□□□□ -0.34
AFF3-215ENST00000498090 ZWILCHQ9H900 591 aa12.94□□□□□ -0.34
AFF3-215ENST00000498090 NOP53Q9NZM5 478 aaKnown RBP12.94□□□□□ -0.34
AFF3-215ENST00000498090 NXF1Q9UBU9 619 aaKnown RBP12.94□□□□□ -0.34
AFF3-215ENST00000498090 ST3GAL5Q9UNP4 418 aa12.94□□□□□ -0.34
AFF3-215ENST00000498090 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.94□□□□□ -0.34
AFF3-215ENST00000498090 PIN4Q9Y237 131 aaKnown RBP12.94□□□□□ -0.34
AFF3-215ENST00000498090 CLUHO75153 1309 aa12.94□□□□□ -0.34
AFF3-215ENST00000498090 DNAH12Q6ZR08 3092 aa12.93□□□□□ -0.34
AFF3-215ENST00000498090 TRAFD1O14545 582 aaPredicted RBP12.93□□□□□ -0.34
AFF3-215ENST00000498090 CHADO15335 359 aa12.93□□□□□ -0.34
AFF3-215ENST00000498090 SPAG7O75391 227 aa12.93□□□□□ -0.34
AFF3-215ENST00000498090 FAM155BO75949 473 aa12.93□□□□□ -0.34
AFF3-215ENST00000498090 ENDOD1O94919 500 aa12.93□□□□□ -0.34
AFF3-215ENST00000498090 NPTXRO95502 500 aa12.93□□□□□ -0.34
AFF3-215ENST00000498090 TRUB2O95900 331 aaKnown RBP12.93□□□□□ -0.34
AFF3-215ENST00000498090 KRT4P19013 534 aa12.93□□□□□ -0.34
AFF3-215ENST00000498090 IL1R2P27930 398 aa12.93□□□□□ -0.34
AFF3-215ENST00000498090 CD52P31358 61 aa12.93□□□□□ -0.34
AFF3-215ENST00000498090 RPA3P35244 121 aaPredicted RBP12.93□□□□□ -0.34
AFF3-215ENST00000498090 EIF3EP60228 445 aaKnown RBP12.93□□□□□ -0.34
AFF3-215ENST00000498090 KCNJ2P63252 427 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms