RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	SMIM18	P0DKX4	95 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	AR	P10275	920 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	HADHB	P55084	474 aa	Known RBP	10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	CRADD	P78560	199 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	NEDD8	Q15843	81 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	PCGF5	Q86SE9	256 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	TDRP	Q86YL5	185 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	RCOR2	Q8IZ40	523 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	CPXCR1	Q8N123	301 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	TTLL6	Q8N841	843 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	FEZF2	Q8TBJ5	459 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	FERMT1	Q9BQL6	677 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	CCDC28B	Q9BUN5	200 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	MRPS26	Q9BYN8	205 aa	Known RBP	10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	C20orf27	Q9GZN8	174 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	UNC45A	Q9H3U1	944 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	TMEM206	Q9H813	350 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	ZNF219	Q9P2Y4	722 aa	Predicted RBP	10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	RGPD5	Q99666	1765 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	TJP1	Q07157	1748 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	TESPA1	A2RU30	521 aa	Predicted RBP	10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	SIN3B	O75182	1162 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	KLHL2	O95198	593 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	MYCL	P12524	364 aa	Predicted RBP	10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	EIF2AK2	P19525	551 aa	Known RBP	10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	PRELP	P51888	382 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	ORC1	Q13415	861 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	BMT2	Q1RMZ1	405 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	TMEM132A	Q24JP5	1023 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	TTC39B	Q5VTQ0	682 aa	Predicted RBP	10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	GPR107	Q5VW38	600 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	GPR141	Q7Z602	305 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	RTKN2	Q8IZC4	609 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	CERK	Q8TCT0	537 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	CMTM5	Q96DZ9	223 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	ZMAT2	Q96NC0	199 aa	Known RBP	10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	SLITRK1	Q96PX8	696 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	UNK	Q9C0B0	810 aa	Known RBP	10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	TIMMDC1	Q9NPL8	285 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	WRAP73	Q9P2S5	460 aa	Predicted RBP	10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	SAC3D1	A6NKF1	404 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	FBP2	O00757	339 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	STAM2	O75886	525 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	S100B	P04271	92 aa	Predicted RBP	10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	MYBPC1	Q00872	1141 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	ITPK1	Q13572	414 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	AAGAB	Q6PD74	315 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	CCDC80	Q76M96	950 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	SLC26A11	Q86WA9	606 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	NUP93	Q8N1F7	819 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	DDI1	Q8WTU0	396 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	SLCO2A1	Q92959	643 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	RTFDC1	Q9BY42	306 aa	Predicted RBP	10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	OXCT2	Q9BYC2	517 aa	Predicted RBP	10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	PLGRKT	Q9HBL7	147 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	PCDH9	Q9HC56	1237 aa		10.99	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	PARP4	Q9UKK3	1724 aa	Known RBP	10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	PDLIM1	O00151	329 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	AMH	P03971	560 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	SERPINA6	P08185	405 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	P4HA1	P13674	534 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	SLC1A6	P48664	564 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	OXCT1	P55809	520 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	SPIRE1	Q08AE8	756 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	PDAP1	Q13442	181 aa	Known RBP	10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	MAMLD1	Q13495	774 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	ITGA7	Q13683	1181 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	EGFLAM	Q63HQ2	1017 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	POTEH	Q6S545	545 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	TTC16	Q8NEE8	873 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	WDR55	Q9H6Y2	383 aa	Predicted RBP	10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	TELO2	Q9Y4R8	837 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	AFG3L2	Q9Y4W6	797 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597		A0A0B4J269	797 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	TMEM247	A6NEH6	219 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	KCNN4	O15554	427 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	PSTPIP1	O43586	416 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	CD48	P09326	243 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	GSTT2	P0CG29	244 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	GSTT2B	P0CG30	244 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	XRCC1	P18887	633 aa	Predicted RBP	10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	SESN2	P58004	480 aa	Predicted RBP	10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	TRAF2	Q12933	501 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	PRKG1	Q13976	671 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	TRIM16L	Q309B1	348 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	PPM1L	Q5SGD2	360 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	INTS5	Q6P9B9	1019 aa	Known RBP	10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	TPTE2	Q6XPS3	522 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	USP37	Q86T82	979 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	DCLK2	Q8N568	766 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	JADE3	Q92613	823 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	TRIM11	Q96F44	468 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	SERPINI1	Q99574	410 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	TEKT3	Q9BXF9	490 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	DRC3	Q9H069	523 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	IP6K2	Q9UHH9	426 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	AURKC	Q9UQB9	309 aa		10.98	□□□□□ -0.65
TRAPPC12-223	ENST00000497597		A8MU76	341 aa		10.97	□□□□□ -0.65
TRAPPC12-223	ENST00000497597	GNPAT	O15228	680 aa		10.97	□□□□□ -0.65

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