RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 KCNN4O15554 427 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 ITGAVP06756 1048 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 APRTP07741 180 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 MSH2P43246 934 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 GTF2A2P52657 109 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 ZNF143P52747 638 aaPredicted RBP12.91□□□□□ -0.34
PHF3-205ENST00000494284 HDAC4P56524 1084 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 GEMIN4P57678 1058 aaKnown RBP12.91□□□□□ -0.34
PHF3-205ENST00000494284 SLC10A2Q12908 348 aaPredicted RBP12.91□□□□□ -0.34
PHF3-205ENST00000494284 OLIG2Q13516 323 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 BBS12Q6ZW61 710 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 OTOAQ7RTW8 1153 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 MTDHQ86UE4 582 aaKnown RBP12.91□□□□□ -0.34
PHF3-205ENST00000494284 PQLC3Q8N755 202 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 RFWD2Q8NHY2 731 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 PCDH19Q8TAB3 1148 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 KBTBD7Q8WVZ9 684 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 NKD2Q969F2 451 aaPredicted RBP12.91□□□□□ -0.34
PHF3-205ENST00000494284 SNX27Q96L92 541 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 FAM111AQ96PZ2 611 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 LRRC37BQ96QE4 947 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 ZIC5Q96T25 663 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 MECRQ9BV79 373 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 SLC13A1Q9BZW2 595 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 IL1RAPL1Q9NZN1 696 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 SLC17A6Q9P2U8 582 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 PSMC3IPQ9P2W1 217 aaPredicted RBP12.91□□□□□ -0.34
PHF3-205ENST00000494284 FARP1Q9Y4F1 1045 aaPredicted RBP12.91□□□□□ -0.34
PHF3-205ENST00000494284 SMIM28A0A1B0GU29 152 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 MCF2LO15068 1137 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 PRPSAP2O60256 369 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 RARBP10826 455 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 NUMBP49757 651 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 ARL4CP56559 192 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 CRADDP78560 199 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 KRT81Q14533 505 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 ZNF268Q14587 947 aaPredicted RBP12.91□□□□□ -0.34
PHF3-205ENST00000494284 LRRC38Q5VT99 294 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 C9orf57Q5W0N0 161 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 SPRYD7Q5W111 196 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 LCLAT1Q6UWP7 414 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 FAM131BQ86XD5 332 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 PPIL6Q8IXY8 311 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 UNC5BQ8IZJ1 945 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 PLD5Q8N7P1 536 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 CMASQ8NFW8 434 aaPredicted RBP12.91□□□□□ -0.34
PHF3-205ENST00000494284 GIMAP7Q8NHV1 300 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 FAF2Q96CS3 445 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 ABHD16BQ9H3Z7 469 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 PRKAG3Q9UGI9 489 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 DIAPH2O60879 1101 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 KRT7P08729 469 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 KITP10721 976 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 EZRP15311 586 aaKnown RBP12.91□□□□□ -0.34
PHF3-205ENST00000494284 CTGFP29279 349 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 GBP2P32456 591 aaPredicted RBP12.91□□□□□ -0.34
PHF3-205ENST00000494284 GMPRP36959 345 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 GRM5P41594 1212 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 INCA1Q0VD86 236 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 FAAP100Q0VG06 881 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 TAF1BQ53T94 588 aaPredicted RBP12.91□□□□□ -0.34
PHF3-205ENST00000494284 MDH1BQ5I0G3 518 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 SLC27A1Q6PCB7 646 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 CCDC91Q7Z6B0 441 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 OSTM1Q86WC4 334 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 PDIK1LQ8N165 341 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 PPM1NQ8N819 430 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 NAT8LQ8N9F0 302 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 ZNF75CPQ92670 426 aaPredicted RBP12.91□□□□□ -0.34
PHF3-205ENST00000494284 P3H4Q92791 437 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 SERAC1Q96JX3 654 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 DHX35Q9H5Z1 703 aaKnown RBP12.91□□□□□ -0.34
PHF3-205ENST00000494284 FBXO6Q9NRD1 293 aaPredicted RBP12.91□□□□□ -0.34
PHF3-205ENST00000494284 DDX56Q9NY93 547 aaKnown RBP12.91□□□□□ -0.34
PHF3-205ENST00000494284 MARCOQ9UEW3 520 aaPredicted RBP12.91□□□□□ -0.34
PHF3-205ENST00000494284 ITGA11Q9UKX5 1188 aa12.91□□□□□ -0.34
PHF3-205ENST00000494284 RBM47A0AV96 593 aaKnown RBP12.9□□□□□ -0.34
PHF3-205ENST00000494284 ANP32DO95626 131 aa12.9□□□□□ -0.34
PHF3-205ENST00000494284 EPHB2P29323 1055 aa12.9□□□□□ -0.34
PHF3-205ENST00000494284 SNX17Q15036 470 aa12.9□□□□□ -0.34
PHF3-205ENST00000494284 GALNTL6Q49A17 601 aa12.9□□□□□ -0.34
PHF3-205ENST00000494284 SWT1Q5T5J6 900 aaKnown RBP12.9□□□□□ -0.34
PHF3-205ENST00000494284 EXOC8Q8IYI6 725 aa12.9□□□□□ -0.34
PHF3-205ENST00000494284 DENND1AQ8TEH3 1009 aa12.9□□□□□ -0.34
PHF3-205ENST00000494284 HASPINQ8TF76 798 aa12.9□□□□□ -0.34
PHF3-205ENST00000494284 NSMCE1Q8WV22 266 aa12.9□□□□□ -0.34
PHF3-205ENST00000494284 UTP4Q969X6 686 aaKnown RBP12.9□□□□□ -0.34
PHF3-205ENST00000494284 ARHGAP39Q9C0H5 1083 aa12.9□□□□□ -0.34
PHF3-205ENST00000494284 C2CD2Q9Y426 696 aa12.9□□□□□ -0.34
PHF3-205ENST00000494284 MAD1L1Q9Y6D9 718 aa12.9□□□□□ -0.34
PHF3-205ENST00000494284 TCRBV9S1A1TA0A576 114 aa12.9□□□□□ -0.34
PHF3-205ENST00000494284 TCEA3O75764 348 aa12.9□□□□□ -0.34
PHF3-205ENST00000494284 PYGBP11216 843 aa12.9□□□□□ -0.34
PHF3-205ENST00000494284 GABRB2P47870 512 aa12.9□□□□□ -0.34
PHF3-205ENST00000494284 MFSD10Q14728 455 aa12.9□□□□□ -0.34
PHF3-205ENST00000494284 KIAA0319Q5VV43 1072 aa12.9□□□□□ -0.34
PHF3-205ENST00000494284 HFE2Q6ZVN8 426 aa12.9□□□□□ -0.34
PHF3-205ENST00000494284 MPP5Q8N3R9 675 aa12.9□□□□□ -0.34
PHF3-205ENST00000494284 SLC35F5Q8WV83 523 aa12.9□□□□□ -0.34
PHF3-205ENST00000494284 TMEM30AQ9NV96 361 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms