RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 CHMP4CQ96CF2 233 aa4.86□□□□□ -1.63
PHC3-213ENST00000491258 EDC3Q96F86 508 aaKnown RBP4.86□□□□□ -1.63
PHC3-213ENST00000491258 PPP1R9BQ96SB3 815 aa4.86□□□□□ -1.63
PHC3-213ENST00000491258 DPH1Q9BZG8 443 aa4.86□□□□□ -1.63
PHC3-213ENST00000491258 USP29Q9HBJ7 922 aa4.86□□□□□ -1.63
PHC3-213ENST00000491258 TMEM45AQ9NWC5 275 aa4.86□□□□□ -1.63
PHC3-213ENST00000491258 IP6K2Q9UHH9 426 aa4.86□□□□□ -1.63
PHC3-213ENST00000491258 ASAP1Q9ULH1 1129 aa4.86□□□□□ -1.63
PHC3-213ENST00000491258 TTBK1Q5TCY1 1321 aaPredicted RBP4.86□□□□□ -1.63
PHC3-213ENST00000491258 EME2A4GXA9 379 aaPredicted RBP4.85□□□□□ -1.63
PHC3-213ENST00000491258 C2CD4BA6NLJ0 364 aa4.85□□□□□ -1.63
PHC3-213ENST00000491258 NCLP19338 710 aaKnown RBP4.85□□□□□ -1.63
PHC3-213ENST00000491258 MCM5P33992 734 aa4.85□□□□□ -1.63
PHC3-213ENST00000491258 IL6STP40189 918 aaPredicted RBP4.85□□□□□ -1.63
PHC3-213ENST00000491258 ZXDBP98169 803 aa4.85□□□□□ -1.63
PHC3-213ENST00000491258 B4GALNT1Q00973 533 aa4.85□□□□□ -1.63
PHC3-213ENST00000491258 TIAL1Q01085 375 aaKnown RBP eCLIP4.85□□□□□ -1.63
PHC3-213ENST00000491258 FAM110CQ1W6H9 321 aa4.85□□□□□ -1.63
PHC3-213ENST00000491258 ZNF628Q5EBL2 1059 aa4.85□□□□□ -1.63
PHC3-213ENST00000491258 DENND1CQ8IV53 801 aa4.85□□□□□ -1.63
PHC3-213ENST00000491258 DIS3LQ8TF46 1054 aaKnown RBP4.85□□□□□ -1.63
PHC3-213ENST00000491258 WIPF2Q8TF74 440 aaPredicted RBP4.85□□□□□ -1.63
PHC3-213ENST00000491258 TRMT61AQ96FX7 289 aaKnown RBP4.85□□□□□ -1.63
PHC3-213ENST00000491258 PPP1R10Q96QC0 940 aaKnown RBP4.85□□□□□ -1.63
PHC3-213ENST00000491258 SMURF2Q9HAU4 748 aa4.85□□□□□ -1.63
PHC3-213ENST00000491258 TRIM36Q9NQ86 728 aa4.85□□□□□ -1.63
PHC3-213ENST00000491258 TXLNGQ9NUQ3 528 aa4.85□□□□□ -1.63
PHC3-213ENST00000491258 DNMT3BQ9UBC3 853 aaKnown RBP4.85□□□□□ -1.63
PHC3-213ENST00000491258 ATAD2BQ9ULI0 1458 aa4.84□□□□□ -1.63
PHC3-213ENST00000491258 SBNO2Q9Y2G9 1366 aa4.84□□□□□ -1.63
PHC3-213ENST00000491258 AP1G1O43747 822 aa4.84□□□□□ -1.63
PHC3-213ENST00000491258 SLC28A2O43868 658 aa4.84□□□□□ -1.63
PHC3-213ENST00000491258 DEUP1Q05D60 604 aa4.84□□□□□ -1.63
PHC3-213ENST00000491258 B4GALNT4Q76KP1 1039 aa4.84□□□□□ -1.63
PHC3-213ENST00000491258 B4GALNT2Q8NHY0 566 aa4.84□□□□□ -1.63
PHC3-213ENST00000491258 SPSB4Q96A44 273 aa4.84□□□□□ -1.63
PHC3-213ENST00000491258 ZNF479Q96JC4 524 aa4.84□□□□□ -1.63
PHC3-213ENST00000491258 TMEM204Q9BSN7 226 aa4.84□□□□□ -1.63
PHC3-213ENST00000491258 ZNF518BQ9C0D4 1074 aa4.84□□□□□ -1.63
PHC3-213ENST00000491258 NUAK2Q9H093 628 aa4.84□□□□□ -1.63
PHC3-213ENST00000491258 ZMAT3Q9HA38 289 aaKnown RBP4.84□□□□□ -1.63
PHC3-213ENST00000491258 XPNPEP3Q9NQH7 507 aa4.84□□□□□ -1.63
PHC3-213ENST00000491258 ARL8BQ9NVJ2 186 aa4.84□□□□□ -1.63
PHC3-213ENST00000491258 MDFICQ9P1T7 246 aa4.84□□□□□ -1.63
PHC3-213ENST00000491258 ANKRD6Q9Y2G4 727 aa4.84□□□□□ -1.63
PHC3-213ENST00000491258 H7C4K7 107 aa4.83□□□□□ -1.64
PHC3-213ENST00000491258 KRT86O43790 486 aa4.83□□□□□ -1.64
PHC3-213ENST00000491258 UBXN7O94888 489 aa4.83□□□□□ -1.64
PHC3-213ENST00000491258 PLAUP00749 431 aa4.83□□□□□ -1.64
PHC3-213ENST00000491258 NGFRP08138 427 aa4.83□□□□□ -1.64
PHC3-213ENST00000491258 FGF2P09038 288 aa4.83□□□□□ -1.64
PHC3-213ENST00000491258 CT47B1P0C2W7 299 aaPredicted RBP4.83□□□□□ -1.64
PHC3-213ENST00000491258 MT3P25713 68 aa4.83□□□□□ -1.64
PHC3-213ENST00000491258 GATMP50440 423 aa4.83□□□□□ -1.64
PHC3-213ENST00000491258 PGDP52209 483 aa4.83□□□□□ -1.64
PHC3-213ENST00000491258 KRT81Q14533 505 aa4.83□□□□□ -1.64
PHC3-213ENST00000491258 EARS2Q5JPH6 523 aaKnown RBP4.83□□□□□ -1.64
PHC3-213ENST00000491258 C11orf44Q8N8P7 122 aa4.83□□□□□ -1.64
PHC3-213ENST00000491258 OR56A3Q8NH54 315 aa4.83□□□□□ -1.64
PHC3-213ENST00000491258 PPP1R35Q8TAP8 253 aa4.83□□□□□ -1.64
PHC3-213ENST00000491258 KAZALD1Q96I82 304 aa4.83□□□□□ -1.64
PHC3-213ENST00000491258 TM2D2Q9BX73 214 aa4.83□□□□□ -1.64
PHC3-213ENST00000491258 SLC12A5Q9H2X9 1139 aa4.83□□□□□ -1.64
PHC3-213ENST00000491258 TMEM8AQ9HCN3 771 aa4.83□□□□□ -1.64
PHC3-213ENST00000491258 A1CFQ9NQ94 594 aaKnown RBP4.83□□□□□ -1.64
PHC3-213ENST00000491258 AASDHPPTQ9NRN7 309 aa4.83□□□□□ -1.64
PHC3-213ENST00000491258 GABBR1Q9UBS5 961 aa4.83□□□□□ -1.64
PHC3-213ENST00000491258 NKX1-2Q9UD57 310 aaPredicted RBP4.83□□□□□ -1.64
PHC3-213ENST00000491258 COG5Q9UP83 839 aa4.83□□□□□ -1.64
PHC3-213ENST00000491258 SIRT4Q9Y6E7 314 aaPredicted RBP4.83□□□□□ -1.64
PHC3-213ENST00000491258 TCF20Q9UGU0 1960 aaKnown RBP4.83□□□□□ -1.64
PHC3-213ENST00000491258 LOC102723971A0A1B0GUV8 181 aa4.82□□□□□ -1.64
PHC3-213ENST00000491258 AGPSO00116 658 aa4.82□□□□□ -1.64
PHC3-213ENST00000491258 FOXN3O00409 490 aaPredicted RBP4.82□□□□□ -1.64
PHC3-213ENST00000491258 CTIFO43310 598 aaKnown RBP4.82□□□□□ -1.64
PHC3-213ENST00000491258 RRP9O43818 475 aaKnown RBP4.82□□□□□ -1.64
PHC3-213ENST00000491258 RASSF9O75901 435 aa4.82□□□□□ -1.64
PHC3-213ENST00000491258 PIAS2O75928 621 aa4.82□□□□□ -1.64
PHC3-213ENST00000491258 NDUFB8O95169 186 aa4.82□□□□□ -1.64
PHC3-213ENST00000491258 PLA2G2AP14555 144 aa4.82□□□□□ -1.64
PHC3-213ENST00000491258 CD19P15391 556 aa4.82□□□□□ -1.64
PHC3-213ENST00000491258 ADRA1DP25100 572 aa4.82□□□□□ -1.64
PHC3-213ENST00000491258 PTDSS1P48651 473 aaKnown RBP4.82□□□□□ -1.64
PHC3-213ENST00000491258 GPC5P78333 572 aa4.82□□□□□ -1.64
PHC3-213ENST00000491258 TXNL4AP83876 142 aaKnown RBP4.82□□□□□ -1.64
PHC3-213ENST00000491258 PPATQ06203 517 aa4.82□□□□□ -1.64
PHC3-213ENST00000491258 RFX8Q6ZV50 586 aa4.82□□□□□ -1.64
PHC3-213ENST00000491258 FAM57BQ71RH2 274 aa4.82□□□□□ -1.64
PHC3-213ENST00000491258 CHPFQ8IZ52 775 aa4.82□□□□□ -1.64
PHC3-213ENST00000491258 PNPLA1Q8N8W4 532 aa4.82□□□□□ -1.64
PHC3-213ENST00000491258 MAML1Q92585 1016 aa4.82□□□□□ -1.64
PHC3-213ENST00000491258 TCF7L1Q9HCS4 588 aa4.82□□□□□ -1.64
PHC3-213ENST00000491258 DECR2Q9NUI1 292 aa4.82□□□□□ -1.64
PHC3-213ENST00000491258 RIMKLBQ9ULI2 386 aa4.82□□□□□ -1.64
PHC3-213ENST00000491258 FZD4Q9ULV1 537 aa4.82□□□□□ -1.64
PHC3-213ENST00000491258 A8MVJ9 347 aa4.81□□□□□ -1.64
PHC3-213ENST00000491258 H3BML4 177 aa4.81□□□□□ -1.64
PHC3-213ENST00000491258 RRHO14718 337 aa4.81□□□□□ -1.64
PHC3-213ENST00000491258 PHGDHO43175 533 aaKnown RBP4.81□□□□□ -1.64
PHC3-213ENST00000491258 EN2P19622 333 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms