RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 CLOCKO15516 846 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 TSHRP16473 764 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 ZNF12P17014 697 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 FGFR3P22607 806 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 ACAT1P24752 427 aaKnown RBP11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 KLRK1P26718 216 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 MAP3K10Q02779 954 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 SF3B3Q15393 1217 aaKnown RBP11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 CCDC153Q494R4 210 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 ATP13A4Q4VNC1 1196 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 EGFLAMQ63HQ2 1017 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 CHADLQ6NUI6 762 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 POLNQ7Z5Q5 900 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 IFNEQ86WN2 208 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 SMYD1Q8NB12 490 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 CALML6Q8TD86 181 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 OSBPL11Q9BXB4 747 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 TASP1Q9H6P5 420 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 CLK4Q9HAZ1 481 aaKnown RBP11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 CD209Q9NNX6 404 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 GIMAP4Q9NUV9 329 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 AGO2Q9UKV8 859 aaKnown RBP11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 GPC6Q9Y625 555 aaPredicted RBP11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 SETD1AO15047 1707 aaKnown RBP11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 SLIT3O75094 1523 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 AFDNP55196 1824 aaKnown RBP11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 CCDC159P0C7I6 412 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 PSMC5P62195 406 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 IGBP1P78318 339 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 PRKG1Q13976 671 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 C16orf46Q6P387 395 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 TMEM179Q6ZVK1 233 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 ZBTB8OSQ8IWT0 167 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 BANPQ8N9N5 519 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 SLC7A3Q8WY07 619 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 DHX35Q9H5Z1 703 aaKnown RBP11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 COPG2Q9UBF2 871 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 PI4KBQ9UBF8 816 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 POMPQ9Y244 141 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 ZC3H11AO75152 810 aaKnown RBP eCLIP11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 CSPG5O95196 566 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 DLGAP3O95886 979 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 GTF2H1P32780 548 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 C1QBPQ07021 282 aaKnown RBP11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 MTERF2Q49AM1 385 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 RALGPS1Q5JS13 557 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 GPR107Q5VW38 600 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 AHI1Q8N157 1196 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 CLEC4FQ8N1N0 589 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 RIN3Q8TB24 985 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 RSPH1Q8WYR4 309 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 VCPIP1Q96JH7 1222 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 GPATCH1Q9BRR8 931 aaKnown RBP11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 HMG20AQ9NP66 347 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 KCNMB3Q9NPA1 279 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 TOPORSQ9NS56 1045 aaPredicted RBP11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 PRPF19Q9UMS4 504 aaKnown RBP11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 SYNJ2BP-COX16A0A087WUM0 186 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 BIRC5O15392 142 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 MTA2O94776 668 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 YWHABP31946 246 aaKnown RBP11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 SLC5A3P53794 718 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 UBAP2Q5T6F2 1119 aaKnown RBP11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 CYP4A22Q5TCH4 519 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 GPAT2Q6NUI2 795 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 TDRD5Q8NAT2 981 aaKnown RBP11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 NRG4Q8WWG1 115 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 COX16Q9P0S2 106 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 FMN2Q9NZ56 1722 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 TCRBV9S1A1TA0A576 114 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 GSTA4O15217 222 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 ZBTB11O95625 1053 aaPredicted RBP11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 NTSR2O95665 410 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 PSMA4P25789 261 aaKnown RBP11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 ACOT2P49753 483 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 TAS2R40P59535 323 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 ZNF699Q32M78 642 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 RAB44Q7Z6P3 723 aaPredicted RBP11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 ZBTB33Q86T24 672 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 CPNE8Q86YQ8 564 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 ELMO3Q96BJ8 720 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 HEXIM2Q96MH2 286 aaKnown RBP11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 SLITRK1Q96PX8 696 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 IKZF4Q9H2S9 585 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 POLR1BQ9H9Y6 1135 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 WDR41Q9HAD4 459 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 PLK2Q9NYY3 685 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 KLHL8Q9P2G9 620 aaPredicted RBP11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 TMED5Q9Y3A6 229 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 CRYBG1Q9Y4K1 1723 aa11.65□□□□□ -0.54
CRNKL1-204ENST00000490910 HEATR9A2RTY3 570 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 TTLL13PA6NNM8 815 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 H3BSA7 217 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 ANGPT2O15123 496 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 ARHGEF9O43307 516 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 COQ9O75208 318 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 ITGAVP06756 1048 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 SDC4P31431 198 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 RPL22P35268 128 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms