RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 SLC13A5Q86YT5 568 aaPredicted RBP13.4□□□□□ -0.26
TOP3A-206ENST00000489131 SCN4BQ8IWT1 228 aa13.4□□□□□ -0.26
TOP3A-206ENST00000489131 LRRN4CLQ8ND94 238 aa13.4□□□□□ -0.26
TOP3A-206ENST00000489131 SCAMP5Q8TAC9 235 aa13.4□□□□□ -0.26
TOP3A-206ENST00000489131 GOLGA1Q92805 767 aa13.4□□□□□ -0.26
TOP3A-206ENST00000489131 NTAN1Q96AB6 310 aa13.4□□□□□ -0.26
TOP3A-206ENST00000489131 FAM149B1Q96BN6 582 aa13.4□□□□□ -0.26
TOP3A-206ENST00000489131 PGLYRP2Q96PD5 576 aa13.4□□□□□ -0.26
TOP3A-206ENST00000489131 PEBP4Q96S96 227 aa13.4□□□□□ -0.26
TOP3A-206ENST00000489131 GDF15Q99988 308 aa13.4□□□□□ -0.26
TOP3A-206ENST00000489131 ABCC13Q9NSE7 274 aa13.4□□□□□ -0.26
TOP3A-206ENST00000489131 CLIC5Q9NZA1 410 aa13.4□□□□□ -0.26
TOP3A-206ENST00000489131 USTQ9Y2C2 406 aa13.4□□□□□ -0.26
TOP3A-206ENST00000489131 MYO16Q9Y6X6 1858 aa13.4□□□□□ -0.26
TOP3A-206ENST00000489131 TEX28O15482 410 aa13.39□□□□□ -0.27
TOP3A-206ENST00000489131 PRPSAP2O60256 369 aa13.39□□□□□ -0.27
TOP3A-206ENST00000489131 F9P00740 461 aa13.39□□□□□ -0.27
TOP3A-206ENST00000489131 FGGP02679 453 aa13.39□□□□□ -0.27
TOP3A-206ENST00000489131 RPL17P18621 184 aaKnown RBP13.39□□□□□ -0.27
TOP3A-206ENST00000489131 RDXP35241 583 aaKnown RBP13.39□□□□□ -0.27
TOP3A-206ENST00000489131 DNA2P51530 1060 aa13.39□□□□□ -0.27
TOP3A-206ENST00000489131 RABGGTBP53611 331 aa13.39□□□□□ -0.27
TOP3A-206ENST00000489131 YWHAGP61981 247 aaKnown RBP eCLIP13.39□□□□□ -0.27
TOP3A-206ENST00000489131 SCAPQ12770 1279 aa13.39□□□□□ -0.27
TOP3A-206ENST00000489131 SHHQ15465 462 aa13.39□□□□□ -0.27
TOP3A-206ENST00000489131 SIX1Q15475 284 aaPredicted RBP13.39□□□□□ -0.27
TOP3A-206ENST00000489131 DDR2Q16832 855 aa13.39□□□□□ -0.27
TOP3A-206ENST00000489131 MGAT5BQ3V5L5 792 aa13.39□□□□□ -0.27
TOP3A-206ENST00000489131 DCAF6Q58WW2 860 aa13.39□□□□□ -0.27
TOP3A-206ENST00000489131 SYPL2Q5VXT5 272 aa13.39□□□□□ -0.27
TOP3A-206ENST00000489131 TXNRD3NBQ6F5E7 133 aa13.39□□□□□ -0.27
TOP3A-206ENST00000489131 PDE12Q6L8Q7 609 aaKnown RBP13.39□□□□□ -0.27
TOP3A-206ENST00000489131 LILRA6Q6PI73 481 aa13.39□□□□□ -0.27
TOP3A-206ENST00000489131 C12orf50Q8NA57 414 aaPredicted RBP13.39□□□□□ -0.27
TOP3A-206ENST00000489131 SPPL3Q8TCT6 385 aa13.39□□□□□ -0.27
TOP3A-206ENST00000489131 MAIP1Q8WWC4 291 aa13.39□□□□□ -0.27
TOP3A-206ENST00000489131 NDRG1Q92597 394 aaKnown RBP13.39□□□□□ -0.27
TOP3A-206ENST00000489131 TRMT2BQ96GJ1 504 aaKnown RBP13.39□□□□□ -0.27
TOP3A-206ENST00000489131 SLITRK1Q96PX8 696 aa13.39□□□□□ -0.27
TOP3A-206ENST00000489131 SMOC2Q9H3U7 446 aa13.39□□□□□ -0.27
TOP3A-206ENST00000489131 NAALADL1Q9UQQ1 740 aa13.39□□□□□ -0.27
TOP3A-206ENST00000489131 GBF1Q92538 1859 aa13.38□□□□□ -0.27
TOP3A-206ENST00000489131 SEC24AO95486 1093 aa13.38□□□□□ -0.27
TOP3A-206ENST00000489131 CNPP09543 421 aaKnown RBP13.38□□□□□ -0.27
TOP3A-206ENST00000489131 RARAP10276 462 aa13.38□□□□□ -0.27
TOP3A-206ENST00000489131 TFE3P19532 575 aaPredicted RBP13.38□□□□□ -0.27
TOP3A-206ENST00000489131 YWHAQP27348 245 aa13.38□□□□□ -0.27
TOP3A-206ENST00000489131 CTNNB1P35222 781 aa13.38□□□□□ -0.27
TOP3A-206ENST00000489131 CETN2P41208 172 aa13.38□□□□□ -0.27
TOP3A-206ENST00000489131 CDKN2BP42772 138 aa13.38□□□□□ -0.27
TOP3A-206ENST00000489131 CXCR3P49682 368 aa13.38□□□□□ -0.27
TOP3A-206ENST00000489131 GPR15P49685 360 aa13.38□□□□□ -0.27
TOP3A-206ENST00000489131 SULT1E1P49888 294 aa13.38□□□□□ -0.27
TOP3A-206ENST00000489131 ARPP19P56211 112 aa13.38□□□□□ -0.27
TOP3A-206ENST00000489131 ERVK-21P61565 698 aa13.38□□□□□ -0.27
TOP3A-206ENST00000489131 USP46P62068 366 aa13.38□□□□□ -0.27
TOP3A-206ENST00000489131 ATP11AP98196 1134 aa13.38□□□□□ -0.27
TOP3A-206ENST00000489131 ZNF211Q13398 564 aaPredicted RBP13.38□□□□□ -0.27
TOP3A-206ENST00000489131 NNTQ13423 1086 aa13.38□□□□□ -0.27
TOP3A-206ENST00000489131 PDK2Q15119 407 aa13.38□□□□□ -0.27
TOP3A-206ENST00000489131 DPYSL2Q16555 572 aa13.38□□□□□ -0.27
TOP3A-206ENST00000489131 GLE1Q53GS7 698 aaKnown RBP13.38□□□□□ -0.27
TOP3A-206ENST00000489131 SPOCD1Q6ZMY3 1216 aa13.38□□□□□ -0.27
TOP3A-206ENST00000489131 MRPL43Q8N983 215 aaKnown RBP13.38□□□□□ -0.27
TOP3A-206ENST00000489131 RAPGEF5Q92565 580 aa13.38□□□□□ -0.27
TOP3A-206ENST00000489131 FAF2Q96CS3 445 aa13.38□□□□□ -0.27
TOP3A-206ENST00000489131 SEPT5Q99719 369 aaPredicted RBP13.38□□□□□ -0.27
TOP3A-206ENST00000489131 UBE2OQ9C0C9 1292 aaKnown RBP13.38□□□□□ -0.27
TOP3A-206ENST00000489131 PRDM16Q9HAZ2 1276 aa13.38□□□□□ -0.27
TOP3A-206ENST00000489131 WDR6Q9NNW5 1121 aaKnown RBP13.38□□□□□ -0.27
TOP3A-206ENST00000489131 NGRNQ9NPE2 291 aaKnown RBP13.38□□□□□ -0.27
TOP3A-206ENST00000489131 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.38□□□□□ -0.27
TOP3A-206ENST00000489131 CALCOCO1Q9P1Z2 691 aa13.38□□□□□ -0.27
TOP3A-206ENST00000489131 RCOR3Q9P2K3 495 aaPredicted RBP13.38□□□□□ -0.27
TOP3A-206ENST00000489131 SLC27A5Q9Y2P5 690 aa13.38□□□□□ -0.27
TOP3A-206ENST00000489131 YIPF1Q9Y548 306 aa13.38□□□□□ -0.27
TOP3A-206ENST00000489131 ZNF638Q14966 1978 aaKnown RBP13.38□□□□□ -0.27
TOP3A-206ENST00000489131 hCG_1818297A0A087WSY0 165 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 SLC38A8A6NNN8 435 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 M0QYT0 321 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 C2CD2LO14523 706 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 CAPN9O14815 690 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 KRT1P04264 644 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 ADH1AP07327 375 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 CSH1P0DML2 217 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 CSH2P0DML3 217 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 NCAM1P13591 858 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 HMGA1P17096 107 aaKnown RBP13.37□□□□□ -0.27
TOP3A-206ENST00000489131 KDELR1P24390 212 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 BMP8BP34820 402 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 PPP3CCP48454 512 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 PLD1Q13393 1074 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 SMC1AQ14683 1233 aaKnown RBP13.37□□□□□ -0.27
TOP3A-206ENST00000489131 LONRF2Q1L5Z9 754 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 ATP13A4Q4VNC1 1196 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 RAB6CQ53S08 254 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 TFDP3Q5H9I0 405 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 ERMARDQ5T6L9 678 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 ZDHHC14Q8IZN3 488 aa13.37□□□□□ -0.27
TOP3A-206ENST00000489131 NOA1Q8NC60 698 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms