RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 CCDC14Q49A88 953 aa16.76■□□□□ 0.27
CLDN11-208ENST00000488989 DAAM2Q86T65 1068 aa16.76■□□□□ 0.27
CLDN11-208ENST00000488989 NT5DC3Q86UY8 548 aa16.76■□□□□ 0.27
CLDN11-208ENST00000488989 PDZD8Q8NEN9 1154 aa16.76■□□□□ 0.27
CLDN11-208ENST00000488989 CENPIQ92674 756 aaPredicted RBP16.76■□□□□ 0.27
CLDN11-208ENST00000488989 PPP2R3CQ969Q6 453 aa16.76■□□□□ 0.27
CLDN11-208ENST00000488989 SLITRK1Q96PX8 696 aa16.76■□□□□ 0.27
CLDN11-208ENST00000488989 WDR24Q96S15 920 aa16.76■□□□□ 0.27
CLDN11-208ENST00000488989 NPY6RQ99463 290 aa16.76■□□□□ 0.27
CLDN11-208ENST00000488989 LRRC3Q9BY71 257 aa16.76■□□□□ 0.27
CLDN11-208ENST00000488989 TTYH1Q9H313 450 aaPredicted RBP16.76■□□□□ 0.27
CLDN11-208ENST00000488989 ABCC13Q9NSE7 274 aa16.76■□□□□ 0.27
CLDN11-208ENST00000488989 CLIC5Q9NZA1 410 aa16.76■□□□□ 0.27
CLDN11-208ENST00000488989 GMIPQ9P107 970 aa16.76■□□□□ 0.27
CLDN11-208ENST00000488989 A0A1W2PQH9 124 aa16.75■□□□□ 0.27
CLDN11-208ENST00000488989 FANCGO15287 622 aa16.75■□□□□ 0.27
CLDN11-208ENST00000488989 ENDOD1O94919 500 aa16.75■□□□□ 0.27
CLDN11-208ENST00000488989 POU3F3P20264 500 aaPredicted RBP16.75■□□□□ 0.27
CLDN11-208ENST00000488989 SDC4P31431 198 aa16.75■□□□□ 0.27
CLDN11-208ENST00000488989 PPP3CCP48454 512 aa16.75■□□□□ 0.27
CLDN11-208ENST00000488989 PGFP49763 221 aa16.75■□□□□ 0.27
CLDN11-208ENST00000488989 SLC25A52Q3SY17 297 aa16.75■□□□□ 0.27
CLDN11-208ENST00000488989 PPM1LQ5SGD2 360 aa16.75■□□□□ 0.27
CLDN11-208ENST00000488989 MEI1Q5TIA1 1274 aa16.75■□□□□ 0.27
CLDN11-208ENST00000488989 MSANTD2Q6P1R3 559 aa16.75■□□□□ 0.27
CLDN11-208ENST00000488989 ELMSAN1Q6PJG2 1045 aa16.75■□□□□ 0.27
CLDN11-208ENST00000488989 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.75■□□□□ 0.27
CLDN11-208ENST00000488989 GOLGA1Q92805 767 aa16.75■□□□□ 0.27
CLDN11-208ENST00000488989 CD101Q93033 1021 aa16.75■□□□□ 0.27
CLDN11-208ENST00000488989 PGAP3Q96FM1 320 aaPredicted RBP16.75■□□□□ 0.27
CLDN11-208ENST00000488989 NCAPGQ9BPX3 1015 aa16.75■□□□□ 0.27
CLDN11-208ENST00000488989 GOLPH3Q9H4A6 298 aa16.75■□□□□ 0.27
CLDN11-208ENST00000488989 NSUN3Q9H649 340 aaKnown RBP16.75■□□□□ 0.27
CLDN11-208ENST00000488989 TLR8Q9NR97 1041 aaKnown RBP16.75■□□□□ 0.27
CLDN11-208ENST00000488989 ZDHHC7Q9NXF8 308 aa16.75■□□□□ 0.27
CLDN11-208ENST00000488989 UXTQ9UBK9 157 aaPredicted RBP16.75■□□□□ 0.27
CLDN11-208ENST00000488989 JRKLQ9Y4A0 524 aa16.75■□□□□ 0.27
CLDN11-208ENST00000488989 PRRC2BQ5JSZ5 2229 aaKnown RBP16.74■□□□□ 0.27
CLDN11-208ENST00000488989 TADA3O75528 432 aa16.74■□□□□ 0.27
CLDN11-208ENST00000488989 TNNT1P13805 278 aa16.74■□□□□ 0.27
CLDN11-208ENST00000488989 COMTP21964 271 aa16.74■□□□□ 0.27
CLDN11-208ENST00000488989 PCK1P35558 622 aa16.74■□□□□ 0.27
CLDN11-208ENST00000488989 NRIP1P48552 1158 aa16.74■□□□□ 0.27
CLDN11-208ENST00000488989 EPHA5P54756 1037 aa16.74■□□□□ 0.27
CLDN11-208ENST00000488989 DCAF6Q58WW2 860 aa16.74■□□□□ 0.27
CLDN11-208ENST00000488989 OTUD1Q5VV17 481 aaPredicted RBP16.74■□□□□ 0.27
CLDN11-208ENST00000488989 SYPL2Q5VXT5 272 aa16.74■□□□□ 0.27
CLDN11-208ENST00000488989 BTBD8Q5XKL5 378 aa16.74■□□□□ 0.27
CLDN11-208ENST00000488989 TMEM184AQ6ZMB5 413 aa16.74■□□□□ 0.27
CLDN11-208ENST00000488989 STRADAQ7RTN6 431 aa16.74■□□□□ 0.27
CLDN11-208ENST00000488989 RBM23Q86U06 439 aaKnown RBP16.74■□□□□ 0.27
CLDN11-208ENST00000488989 TMC8Q8IU68 726 aa16.74■□□□□ 0.27
CLDN11-208ENST00000488989 ARFGAP1Q8N6T3 406 aa16.74■□□□□ 0.27
CLDN11-208ENST00000488989 ZNF512Q96ME7 567 aaPredicted RBP16.74■□□□□ 0.27
CLDN11-208ENST00000488989 CFAP57Q96MR6 1250 aa16.74■□□□□ 0.27
CLDN11-208ENST00000488989 ADAM33Q9BZ11 813 aa16.74■□□□□ 0.27
CLDN11-208ENST00000488989 IL21Q9HBE4 155 aa16.74■□□□□ 0.27
CLDN11-208ENST00000488989 OSER1Q9NX31 292 aa16.74■□□□□ 0.27
CLDN11-208ENST00000488989 AMFRQ9UKV5 643 aa16.74■□□□□ 0.27
CLDN11-208ENST00000488989 STAP1Q9ULZ2 295 aa16.74■□□□□ 0.27
CLDN11-208ENST00000488989 MAGED2Q9UNF1 606 aaPredicted RBP16.74■□□□□ 0.27
CLDN11-208ENST00000488989 NAALADL1Q9UQQ1 740 aa16.74■□□□□ 0.27
CLDN11-208ENST00000488989 C2orf16Q68DN1 1984 aa16.74■□□□□ 0.27
CLDN11-208ENST00000488989 TMEM110-MUSTN1A8MSY1 372 aa16.73■□□□□ 0.27
CLDN11-208ENST00000488989 CAPN9O14815 690 aa16.73■□□□□ 0.27
CLDN11-208ENST00000488989 LRCH4O75427 683 aa16.73■□□□□ 0.27
CLDN11-208ENST00000488989 IGLV3-25P01717 112 aa16.73■□□□□ 0.27
CLDN11-208ENST00000488989 F11P03951 625 aa16.73■□□□□ 0.27
CLDN11-208ENST00000488989 NCAM1P13591 858 aa16.73■□□□□ 0.27
CLDN11-208ENST00000488989 EIF4EBP2Q13542 120 aaPredicted RBP16.73■□□□□ 0.27
CLDN11-208ENST00000488989 C15orf59Q2T9L4 293 aaPredicted RBP16.73■□□□□ 0.27
CLDN11-208ENST00000488989 CC2D1AQ6P1N0 951 aaPredicted RBP16.73■□□□□ 0.27
CLDN11-208ENST00000488989 SYT10Q6XYQ8 523 aa16.73■□□□□ 0.27
CLDN11-208ENST00000488989 PEX26Q7Z412 305 aa16.73■□□□□ 0.27
CLDN11-208ENST00000488989 CPNE8Q86YQ8 564 aa16.73■□□□□ 0.27
CLDN11-208ENST00000488989 ELMOD1Q8N336 334 aa16.73■□□□□ 0.27
CLDN11-208ENST00000488989 CMASQ8NFW8 434 aaPredicted RBP16.73■□□□□ 0.27
CLDN11-208ENST00000488989 HES6Q96HZ4 224 aa16.73■□□□□ 0.27
CLDN11-208ENST00000488989 TLR10Q9BXR5 811 aa16.73■□□□□ 0.27
CLDN11-208ENST00000488989 ZNF334Q9HCZ1 680 aaPredicted RBP16.73■□□□□ 0.27
CLDN11-208ENST00000488989 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.73■□□□□ 0.27
CLDN11-208ENST00000488989 TMEM51Q9NW97 253 aa16.73■□□□□ 0.27
CLDN11-208ENST00000488989 DNAI1Q9UI46 699 aa16.73■□□□□ 0.27
CLDN11-208ENST00000488989 ZNF840PA6NDX5 716 aa16.72■□□□□ 0.27
CLDN11-208ENST00000488989 MIF4GDA9UHW6 222 aaKnown RBP16.72■□□□□ 0.27
CLDN11-208ENST00000488989 RFPL2O75678 378 aa16.72■□□□□ 0.27
CLDN11-208ENST00000488989 RNF8O76064 485 aa16.72■□□□□ 0.27
CLDN11-208ENST00000488989 FTCDO95954 541 aa16.72■□□□□ 0.27
CLDN11-208ENST00000488989 RALAP11233 206 aa16.72■□□□□ 0.27
CLDN11-208ENST00000488989 RARGP13631 454 aa16.72■□□□□ 0.27
CLDN11-208ENST00000488989 DESP17661 470 aa16.72■□□□□ 0.27
CLDN11-208ENST00000488989 CTNNA2P26232 953 aa16.72■□□□□ 0.27
CLDN11-208ENST00000488989 TUBP50607 506 aa16.72■□□□□ 0.27
CLDN11-208ENST00000488989 HDAC4P56524 1084 aa16.72■□□□□ 0.27
CLDN11-208ENST00000488989 PITX1P78337 314 aaPredicted RBP16.72■□□□□ 0.27
CLDN11-208ENST00000488989 HYAL1Q12794 435 aa16.72■□□□□ 0.27
CLDN11-208ENST00000488989 TAF12Q16514 161 aa16.72■□□□□ 0.27
CLDN11-208ENST00000488989 PABPC1LQ4VXU2 614 aaKnown RBP16.72■□□□□ 0.27
CLDN11-208ENST00000488989 TCEAL5Q5H9L2 206 aa16.72■□□□□ 0.27
CLDN11-208ENST00000488989 LRRC38Q5VT99 294 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms