RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 MYCBPAPQ8TBZ2 947 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 ZNF296Q8WUU4 475 aaPredicted RBP21.2■□□□□ 0.98
HPS3-206ENST00000486530 MED10Q9BTT4 135 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 PPANQ9NQ55 473 aaKnown RBP21.2■□□□□ 0.98
HPS3-206ENST00000486530 MIOSQ9NXC5 875 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.2■□□□□ 0.98
HPS3-206ENST00000486530 CFAP69A5D8W1 941 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 H7C0C1 242 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 CABYRO75952 493 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 FAM107AO95990 144 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 INHAP05111 366 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 FAM200BP0CF97 657 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 CD52P31358 61 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 ATP5OP48047 213 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 ARL4CP56559 192 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 ADCY1Q08828 1119 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 LHX8Q68G74 356 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 C1orf228Q6PIY5 440 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 DSTYKQ6XUX3 929 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 CLEC20AQ6ZU45 233 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 ZC3H18Q86VM9 953 aaKnown RBP21.2■□□□□ 0.98
HPS3-206ENST00000486530 PCDH19Q8TAB3 1148 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 SYT15Q9BQS2 421 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 OSBPL7Q9BZF2 842 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 CACNG4Q9UBN1 327 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 AP4E1Q9UPM8 1137 aa21.2■□□□□ 0.98
HPS3-206ENST00000486530 GMNCA6NCL1 334 aa21.19■□□□□ 0.98
HPS3-206ENST00000486530 CLDN5O00501 218 aa21.19■□□□□ 0.98
HPS3-206ENST00000486530 EBAG9O00559 213 aa21.19■□□□□ 0.98
HPS3-206ENST00000486530 CHN1P15882 459 aa21.19■□□□□ 0.98
HPS3-206ENST00000486530 AFF1P51825 1210 aaKnown RBP21.19■□□□□ 0.98
HPS3-206ENST00000486530 SEC24CP53992 1094 aa21.19■□□□□ 0.98
HPS3-206ENST00000486530 MRPS5P82675 430 aaKnown RBP21.19■□□□□ 0.98
HPS3-206ENST00000486530 PTK7Q13308 1070 aa21.19■□□□□ 0.98
HPS3-206ENST00000486530 PPP6R3Q5H9R7 873 aaPredicted RBP21.19■□□□□ 0.98
HPS3-206ENST00000486530 KIAA0319Q5VV43 1072 aa21.19■□□□□ 0.98
HPS3-206ENST00000486530 EXOC3L1Q86VI1 746 aa21.19■□□□□ 0.98
HPS3-206ENST00000486530 ZBED8Q8IZ13 594 aa21.19■□□□□ 0.98
HPS3-206ENST00000486530 MDM1Q8TC05 714 aa21.19■□□□□ 0.98
HPS3-206ENST00000486530 ARHGEF2Q92974 986 aaKnown RBP21.19■□□□□ 0.98
HPS3-206ENST00000486530 CCT8L2Q96SF2 557 aa21.19■□□□□ 0.98
HPS3-206ENST00000486530 ADAM33Q9BZ11 813 aa21.19■□□□□ 0.98
HPS3-206ENST00000486530 LRRC4Q9HBW1 653 aa21.19■□□□□ 0.98
HPS3-206ENST00000486530 HTTP42858 3142 aa21.19■□□□□ 0.98
HPS3-206ENST00000486530 GHRP10912 638 aa21.18■□□□□ 0.98
HPS3-206ENST00000486530 ZFXP17010 805 aaPredicted RBP21.18■□□□□ 0.98
HPS3-206ENST00000486530 IGFBP6P24592 240 aaPredicted RBP21.18■□□□□ 0.98
HPS3-206ENST00000486530 L1CAMP32004 1257 aa21.18■□□□□ 0.98
HPS3-206ENST00000486530 PDIA2Q13087 525 aaKnown RBP21.18■□□□□ 0.98
HPS3-206ENST00000486530 DSC3Q14574 896 aa21.18■□□□□ 0.98
HPS3-206ENST00000486530 SLC25A52Q3SY17 297 aa21.18■□□□□ 0.98
HPS3-206ENST00000486530 DEFB106AQ8N104 65 aa21.18■□□□□ 0.98
HPS3-206ENST00000486530 SIX6OS1Q8N1H7 587 aa21.18■□□□□ 0.98
HPS3-206ENST00000486530 ZNF473Q8WTR7 871 aaKnown RBP21.18■□□□□ 0.98
HPS3-206ENST00000486530 FAM149B1Q96BN6 582 aa21.18■□□□□ 0.98
HPS3-206ENST00000486530 RTP4Q96DX8 246 aa21.18■□□□□ 0.98
HPS3-206ENST00000486530 XPO6Q96QU8 1125 aaKnown RBP21.18■□□□□ 0.98
HPS3-206ENST00000486530 DHX35Q9H5Z1 703 aaKnown RBP21.18■□□□□ 0.98
HPS3-206ENST00000486530 NRDE2Q9H7Z3 1164 aa21.18■□□□□ 0.98
HPS3-206ENST00000486530 CRTAC1Q9NQ79 661 aa21.18■□□□□ 0.98
HPS3-206ENST00000486530 KRT82Q9NSB4 513 aa21.18■□□□□ 0.98
HPS3-206ENST00000486530 CYP2F1P24903 491 aa21.18■□□□□ 0.98
HPS3-206ENST00000486530 SULT1E1P49888 294 aa21.18■□□□□ 0.98
HPS3-206ENST00000486530 FASTKD3Q14CZ7 662 aaKnown RBP21.18■□□□□ 0.98
HPS3-206ENST00000486530 UPP1Q16831 310 aa21.18■□□□□ 0.98
HPS3-206ENST00000486530 ANKRD22Q5VYY1 191 aa21.18■□□□□ 0.98
HPS3-206ENST00000486530 SLAIN1Q8ND83 568 aa21.18■□□□□ 0.98
HPS3-206ENST00000486530 C3orf58Q8NDZ4 430 aa21.18■□□□□ 0.98
HPS3-206ENST00000486530 PPCSQ9HAB8 311 aa21.18■□□□□ 0.98
HPS3-206ENST00000486530 TRMT13Q9NUP7 481 aaKnown RBP21.18■□□□□ 0.98
HPS3-206ENST00000486530 CTNNAL1Q9UBT7 734 aa21.18■□□□□ 0.98
HPS3-206ENST00000486530 CDH9Q9ULB4 789 aa21.18■□□□□ 0.98
HPS3-206ENST00000486530 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.18■□□□□ 0.98
HPS3-206ENST00000486530 A0A0U1RQF3 1178 aa21.17■□□□□ 0.98
HPS3-206ENST00000486530 BCLAF3A2AJT9 711 aaKnown RBP21.17■□□□□ 0.98
HPS3-206ENST00000486530 CASTOR2A6NHX0 329 aa21.17■□□□□ 0.98
HPS3-206ENST00000486530 E7ESA3 106 aa21.17■□□□□ 0.98
HPS3-206ENST00000486530 MGEA5O60502 916 aa21.17■□□□□ 0.98
HPS3-206ENST00000486530 BEST1O76090 585 aa21.17■□□□□ 0.98
HPS3-206ENST00000486530 FBXO21O94952 628 aa21.17■□□□□ 0.98
HPS3-206ENST00000486530 ATXN1P54253 815 aaKnown RBP21.17■□□□□ 0.98
HPS3-206ENST00000486530 YWHAZP63104 245 aaKnown RBP21.17■□□□□ 0.98
HPS3-206ENST00000486530 BASP1P80723 227 aaKnown RBP21.17■□□□□ 0.98
HPS3-206ENST00000486530 PPARDQ03181 441 aa21.17■□□□□ 0.98
HPS3-206ENST00000486530 LPIN1Q14693 890 aa21.17■□□□□ 0.98
HPS3-206ENST00000486530 TRIM71Q2Q1W2 868 aaKnown RBP21.17■□□□□ 0.98
HPS3-206ENST00000486530 CCDC38Q502W7 563 aa21.17■□□□□ 0.98
HPS3-206ENST00000486530 PSTKQ8IV42 348 aaKnown RBP21.17■□□□□ 0.98
HPS3-206ENST00000486530 PGBD4Q96DM1 585 aa21.17■□□□□ 0.98
HPS3-206ENST00000486530 TSEN34Q9BSV6 310 aaKnown RBP21.17■□□□□ 0.98
HPS3-206ENST00000486530 HMX1Q9NP08 348 aaPredicted RBP21.17■□□□□ 0.98
HPS3-206ENST00000486530 EURLQ9NYK6 297 aa21.17■□□□□ 0.98
HPS3-206ENST00000486530 PAK5Q9P286 719 aa21.17■□□□□ 0.98
HPS3-206ENST00000486530 NOD1Q9Y239 953 aa21.17■□□□□ 0.98
HPS3-206ENST00000486530 HEY1Q9Y5J3 304 aa21.17■□□□□ 0.98
HPS3-206ENST00000486530 PTCH2Q9Y6C5 1203 aa21.17■□□□□ 0.98
HPS3-206ENST00000486530 EXOC1LA0A1B0GW35 172 aa21.16■□□□□ 0.98
HPS3-206ENST00000486530 GOLGA8MH3BSY2 632 aa21.16■□□□□ 0.98
HPS3-206ENST00000486530 SKIP12755 728 aa21.16■□□□□ 0.98
HPS3-206ENST00000486530 NOS2P35228 1153 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms