RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 ATP5C1P36542 298 aaKnown RBP7.39□□□□□ -1.23
VPS50-218ENST00000485994 SOX9P48436 509 aa7.39□□□□□ -1.23
VPS50-218ENST00000485994 IFNAR2P48551 515 aa7.39□□□□□ -1.23
VPS50-218ENST00000485994 MAP3K7CLP57077 242 aa7.39□□□□□ -1.23
VPS50-218ENST00000485994 GCNT1Q02742 428 aa7.39□□□□□ -1.23
VPS50-218ENST00000485994 KCNH2Q12809 1159 aa7.39□□□□□ -1.23
VPS50-218ENST00000485994 PAK1Q13153 545 aa7.39□□□□□ -1.23
VPS50-218ENST00000485994 CUL2Q13617 745 aa7.39□□□□□ -1.23
VPS50-218ENST00000485994 PON2Q15165 354 aa7.39□□□□□ -1.23
VPS50-218ENST00000485994 STILQ15468 1287 aa7.39□□□□□ -1.23
VPS50-218ENST00000485994 CNGA2Q16280 664 aa7.39□□□□□ -1.23
VPS50-218ENST00000485994 PKDCCQ504Y2 493 aa7.39□□□□□ -1.23
VPS50-218ENST00000485994 SWT1Q5T5J6 900 aaKnown RBP7.39□□□□□ -1.23
VPS50-218ENST00000485994 TCERG1LQ5VWI1 586 aa7.39□□□□□ -1.23
VPS50-218ENST00000485994 TRIM68Q6AZZ1 485 aa7.39□□□□□ -1.23
VPS50-218ENST00000485994 ISM2Q6H9L7 571 aa7.39□□□□□ -1.23
VPS50-218ENST00000485994 CAMKK1Q8N5S9 505 aa7.39□□□□□ -1.23
VPS50-218ENST00000485994 MLKLQ8NB16 471 aa7.39□□□□□ -1.23
VPS50-218ENST00000485994 SUMF1Q8NBK3 374 aa7.39□□□□□ -1.23
VPS50-218ENST00000485994 ATRIPQ8WXE1 791 aa7.39□□□□□ -1.23
VPS50-218ENST00000485994 ELMO3Q96BJ8 720 aa7.39□□□□□ -1.23
VPS50-218ENST00000485994 FAM81BQ96LP2 452 aa7.39□□□□□ -1.23
VPS50-218ENST00000485994 CDK5RAP1Q96SZ6 601 aaKnown RBP7.39□□□□□ -1.23
VPS50-218ENST00000485994 P2RY13Q9BPV8 354 aa7.39□□□□□ -1.23
VPS50-218ENST00000485994 KLF16Q9BXK1 252 aaPredicted RBP7.39□□□□□ -1.23
VPS50-218ENST00000485994 SRRTQ9BXP5 876 aaKnown RBP7.39□□□□□ -1.23
VPS50-218ENST00000485994 EPC1Q9H2F5 836 aa7.39□□□□□ -1.23
VPS50-218ENST00000485994 FBRSL1Q9HCM7 1045 aaKnown RBP7.39□□□□□ -1.23
VPS50-218ENST00000485994 FAM49BQ9NUQ9 324 aa7.39□□□□□ -1.23
VPS50-218ENST00000485994 RWDD2AQ9UIY3 292 aa7.39□□□□□ -1.23
VPS50-218ENST00000485994 CNTN6Q9UQ52 1028 aa7.39□□□□□ -1.23
VPS50-218ENST00000485994 CPQQ9Y646 472 aa7.39□□□□□ -1.23
VPS50-218ENST00000485994 COL4A3Q01955 1670 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 CEP250Q9BV73 2442 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 GTPBP10A4D1E9 387 aaKnown RBP7.38□□□□□ -1.23
VPS50-218ENST00000485994 K7ESF4 209 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 GREM1O60565 184 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 TLR5O60602 858 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 CCDC192P0DO97 292 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 MBL2P11226 248 aaPredicted RBP7.38□□□□□ -1.23
VPS50-218ENST00000485994 ARSAP15289 507 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 CD58P19256 250 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 ACO1P21399 889 aaKnown RBP7.38□□□□□ -1.23
VPS50-218ENST00000485994 ERCC5P28715 1186 aaPredicted RBP7.38□□□□□ -1.23
VPS50-218ENST00000485994 ADORA2BP29275 332 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 SLC19A1P41440 591 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 TNFRSF4P43489 277 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 PLA2G4AP47712 749 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 SLC8A3P57103 927 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 COG7P83436 770 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 DHCR24Q15392 516 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 MEA1Q16626 185 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 GAB4Q2WGN9 574 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 CCDC40Q4G0X9 1142 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 HSF5Q4G112 596 aaPredicted RBP7.38□□□□□ -1.23
VPS50-218ENST00000485994 PREPLQ4J6C6 727 aaPredicted RBP7.38□□□□□ -1.23
VPS50-218ENST00000485994 DCAF17Q5H9S7 520 aaPredicted RBP7.38□□□□□ -1.23
VPS50-218ENST00000485994 FSTL4Q6MZW2 842 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 RHBDF2Q6PJF5 856 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 LCLAT1Q6UWP7 414 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 TADA2BQ86TJ2 420 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 ARHGAP18Q8N392 663 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 GPR161Q8N6U8 529 aaKnown RBP7.38□□□□□ -1.23
VPS50-218ENST00000485994 KCNV2Q8TDN2 545 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 KCTD13Q8WZ19 329 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 CD101Q93033 1021 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 MMRN2Q9H8L6 949 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 KRT82Q9NSB4 513 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.38□□□□□ -1.23
VPS50-218ENST00000485994 ZNF510Q9Y2H8 683 aa7.38□□□□□ -1.23
VPS50-218ENST00000485994 ABCA7Q8IZY2 2146 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 FAM187AA6NFU0 413 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 BIN1O00499 593 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 XPO1O14980 1071 aaKnown RBP7.37□□□□□ -1.23
VPS50-218ENST00000485994 HOXC11O43248 304 aaPredicted RBP7.37□□□□□ -1.23
VPS50-218ENST00000485994 ABL1P00519 1130 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 AFPP02771 609 aaKnown RBP7.37□□□□□ -1.23
VPS50-218ENST00000485994 RALAP11233 206 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 RARGP13631 454 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 ANP32AP39687 249 aaKnown RBP7.37□□□□□ -1.23
VPS50-218ENST00000485994 OPRD1P41143 372 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 RPL34P49207 117 aaKnown RBP7.37□□□□□ -1.23
VPS50-218ENST00000485994 PGFP49763 221 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 MRPS21P82921 87 aaKnown RBP7.37□□□□□ -1.23
VPS50-218ENST00000485994 GAD2Q05329 585 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 BST2Q10589 180 aaKnown RBP7.37□□□□□ -1.23
VPS50-218ENST00000485994 ZNF394Q53GI3 561 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 SGO2Q562F6 1265 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 KLHL10Q6JEL2 608 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 ENOSF1Q7L5Y1 443 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 SYT13Q7L8C5 426 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 GPRIN1Q7Z2K8 1008 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 SCD5Q86SK9 330 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 WDR5BQ86VZ2 330 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 LONP2Q86WA8 852 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 TTC30AQ86WT1 665 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 IRF2BP1Q8IU81 584 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 ETFBKMTQ8IXQ9 262 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 TTC8Q8TAM2 541 aa7.37□□□□□ -1.23
VPS50-218ENST00000485994 SLC35F5Q8WV83 523 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms